BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,013,717	+G	coding (3/999 nt)	ysgA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,013,717	1	.	G	100.0%	1766.8 / NA	522	M1M (ATG→ATC) †	ysgA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (253/269); total (253/269)

Only 100 of 546 total aligned reads displayed.

TAAGCAGGCATGTTATCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑CCTTATAAAAATGTTGCGCAATGTTAACTATA  >  NC_000913/4013625‑4013802

taggCAGGCTTGTTACCCCTTGGTGAGGGAAAAGGGGTGACG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGc                                                                                         <  1:3768046/90‑1 (MQ=255)

tAAGCAGGCATGTTATCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGc                                                                                         >  2:6697489/1‑93 (MQ=255)

  aGCAGGCATGTTATCCCTTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGcga                                                                                       <  2:2551796/93‑3 (MQ=255)

  aGCAGGCATGTTATCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGcga                                                                                       <  2:5728884/93‑3 (MQ=255)

  aGCAGGCATGTTACCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGcga                                                                                       <  2:6003576/93‑3 (MQ=255)

      ggCATGTTATCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATgca                                                                                   >  2:2755942/1‑93 (MQ=255)

      ggCATGTTATCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATgca                                                                                   >  2:4306593/1‑93 (MQ=255)

        cATGTTATCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATgcagc                                                                                 >  2:1993295/1‑93 (MQ=255)

          tGTTATCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGcagcag                                                                               >  2:3052281/1‑93 (MQ=255)

              aTCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTTTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGc                                                                           >  1:4160911/1‑93 (MQ=255)

              aTCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGc                                                                           >  2:684846/1‑93 (MQ=255)

               tCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCa                                                                          >  1:467859/1‑93 (MQ=255)

                ccctTTGTAAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCaa                                                                         <  1:4327090/93‑1 (MQ=255)

                ccccTTGTGAGGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCaa                                                                         <  2:5843999/93‑1 (MQ=255)

                ccccTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCaa                                                                         >  2:155705/1‑93 (MQ=255)

                 cctttGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCaaa                                                                        <  2:7264874/90‑1 (MQ=255)

                 cccTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCaaa                                                                        >  2:799635/1‑93 (MQ=255)

                 cccTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCaaa                                                                        >  2:6077270/1‑93 (MQ=255)

                 cccTTGGGAAGGGAAAGGGGTGAAGCCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCaa                                                                         <  1:2816781/93‑1 (MQ=255)

                   cTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATc                                                                      <  2:5572959/93‑1 (MQ=255)

                    ttGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATcc                                                                     >  1:575105/1‑93 (MQ=255)

                        gAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGAt                                                                 >  2:4037777/1‑93 (MQ=255)

                           gggATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGAttgt                                                              <  2:377914/93‑1 (MQ=255)

                           gggATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGAttgt                                                              >  2:2295768/1‑93 (MQ=255)

                            ggATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGAttgtt                                                             >  2:3549667/1‑93 (MQ=255)

                             gATAGAGGTGAAGCCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGAttgtt                                                             <  1:4987929/93‑1 (MQ=255)

                             gATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGAttgttg                                                            >  1:5626422/1‑93 (MQ=255)

                               tAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATtgttgtg                                                          >  2:5097323/1‑93 (MQ=255)

                                agagGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATtgttgtgt                                                         <  2:1161619/93‑1 (MQ=255)

                                agagGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATtgttgtgt                                                         <  2:7443505/93‑1 (MQ=255)

                                 gagGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATtgttgtgtt                                                        >  1:17483/1‑93 (MQ=255)

                                   ggTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTgttgtgttgt                                                      <  1:6042635/93‑1 (MQ=255)

                                    gTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTgttgtt                                                     <  2:5283338/93‑1 (MQ=255)

                                    gTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTgttgtt                                                     >  1:453772/1‑93 (MQ=255)

                                    gTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTgttgtt                                                     >  2:1045730/1‑93 (MQ=255)

                                      gagg‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGc                                                   <  2:3941027/90‑1 (MQ=255)

                                       aaG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGcc                                                  <  2:3674609/93‑1 (MQ=255)

                                        aG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCa                                                 >  1:2697193/1‑93 (MQ=255)

                                        aG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCa                                                 >  2:5682418/1‑93 (MQ=255)

                                        aG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCa                                                 <  1:2203872/93‑1 (MQ=255)

                                         g‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCAt                                                >  1:1632304/1‑93 (MQ=255)

                                         g‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGCTGTGTTGTTGCCAt                                                >  2:1473709/1‑93 (MQ=255)

                                           cccGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATg                                               <  2:6451488/93‑1 (MQ=255)

                                             cGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGt                                             <  2:7164641/93‑1 (MQ=255)

                                             cGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGt                                             >  1:2450167/1‑93 (MQ=255)

                                              gCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTa                                            >  2:4868594/1‑93 (MQ=255)

                                              gCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTa                                            <  1:3259370/93‑1 (MQ=255)

                                              gCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTa                                            <  2:7062546/93‑1 (MQ=255)

                                               ccACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTAt                                           >  1:6908973/1‑93 (MQ=255)

                                               ccACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTAt                                           >  1:1460533/1‑93 (MQ=255)

                                               ccACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTAt                                           <  2:2183337/93‑1 (MQ=255)

                                                cacaATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTAtt                                          <  2:895700/93‑1 (MQ=255)

                                                cacaATCGCGTCGTCCGGGGTCTGAACGATGGTCAAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTAtt                                          >  1:6249756/1‑93 (MQ=255)

                                                 acaATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATtc                                         <  1:2588051/93‑1 (MQ=255)

                                                    aTCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTGGCCATGGTATTCTcc                                      <  1:6627398/93‑1 (MQ=255)

                                                     tCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCg                                     <  1:3163677/93‑1 (MQ=255)

                                                       gcgTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTa                                   <  2:6909441/93‑1 (MQ=255)

                                                        cgtcgtCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c                                 <  2:3383857/93‑1 (MQ=255)

                                                         gtcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑cc                                <  2:2814786/93‑1 (MQ=255)

                                                         gtcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑cc                                <  1:5273833/93‑1 (MQ=255)

                                                          tcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccc                               <  1:1160870/93‑2 (MQ=255)

                                                          tcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccc                               >  1:7289217/1‑92 (MQ=255)

                                                          tcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccc                               <  1:5866463/93‑2 (MQ=255)

                                                          tcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccc                               >  1:6521448/1‑92 (MQ=255)

                                                            gtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctt                             >  2:5023777/1‑90 (MQ=255)

                                                             tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctta                            >  2:1926521/1‑89 (MQ=255)

                                                             tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctta                            <  2:6545309/93‑5 (MQ=255)

                                                             tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑ccctta                            <  2:6218572/93‑5 (MQ=255)

                                                                  ggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaa                        >  2:4237580/1‑93 (MQ=255)

                                                                  ggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaa                        <  1:4628956/93‑1 (MQ=255)

                                                                  ggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaa                        >  1:7051332/1‑93 (MQ=255)

                                                                  ggTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaa                        <  2:5419214/93‑1 (MQ=255)

                                                                   gTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaaa                       <  1:3846055/93‑1 (MQ=255)

                                                                   gTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaaa                       <  2:180254/93‑1 (MQ=255)

                                                                   gTCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATaaaaa                       >  2:4648711/1‑93 (MQ=255)

                                                                    tCTGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAAt                      <  1:3950243/93‑1 (MQ=255)

                                                                      tGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGt                    >  1:1056834/1‑93 (MQ=255)

                                                                      tGAACGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGt                    >  1:1230218/1‑93 (MQ=255)

                                                                         aCGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGTAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTgc                 >  2:6364340/1‑93 (MQ=255)

                                                                          cGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTgcg                >  2:6599593/1‑93 (MQ=255)

                                                                          cGATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTgcg                >  2:1332400/1‑93 (MQ=255)

                                                                           gATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTgcgc               <  1:2130734/93‑1 (MQ=255)

                                                                           gATGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTgcgc               >  1:6401818/1‑93 (MQ=255)

                                                                            aTGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCa              >  1:7449266/1‑93 (MQ=255)

                                                                             tGGTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCaa             <  1:5029513/93‑1 (MQ=255)

                                                                              ggTCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAAt            >  2:2045609/1‑93 (MQ=255)

                                                                                tCGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGt          >  2:2843371/1‑93 (MQ=255)

                                                                                 cGAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGtt         <  1:34724/93‑1 (MQ=255)

                                                                                  gAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTa        >  2:1662758/1‑93 (MQ=255)

                                                                                  gAAGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTa        >  2:7366560/1‑93 (MQ=255)

                                                                                   aaGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTaa       <  1:2992388/93‑1 (MQ=255)

                                                                                    aGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAAc      <  2:3263372/93‑1 (MQ=255)

                                                                                    aGCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAAc      >  1:6734169/1‑93 (MQ=255)

                                                                                     gCGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACt     >  1:5157691/1‑93 (MQ=255)

                                                                                      cGAGAGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACta    <  2:4772817/93‑1 (MQ=255)

                                                                                       gagaGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACtat   <  1:543871/93‑1 (MQ=255)

                                                                                       gagaGGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACtat   <  1:1318862/93‑1 (MQ=255)

                                                                                        agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACtata  <  1:790153/93‑1 (MQ=255)

                                                                                        agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACtata  <  1:3614732/93‑1 (MQ=255)

                                                                                        agagGCGATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACCCTTATAAAAATGTTGCGCAATGTTAACtata  <  1:1938314/93‑1 (MQ=255)

TAAGCAGGCATGTTATCCCCTTGTGAAGGGATAGAGGTGAAG‑CCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑ATGCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑CCTTATAAAAATGTTGCGCAATGTTAACTATA  >  NC_000913/4013625‑4013802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`