New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3192559 =280 (0.950)207 (0.890)
+ATGTGTTAATGAAACCTTC
83/146 2.0 48.9% intergenic (+18/+402) b3051/b3052 putative membrane protein/putative kinase
?NC_000913 = 3192916 266 (0.900)intergenic (+375/+45) b3051/b3052 putative membrane protein/putative kinase

Only 100 of 552 total aligned reads displayed.

GTTTCAGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTC  >  NC_000913/3192467‑3192651
                                                                                            |                                                                                            
gccaatcagaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacata                                                                                              >  1:2600235‑M1/93‑93 (MQ=255)
gTTTCAGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGaataa                                                                                              <  1:5240979/93‑1 (MQ=255)
 tttCAGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGaataat                                                                                             >  2:2724992/1‑93 (MQ=255)
  caatcagaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATc                                                                                            >  1:810938‑M1/91‑93 (MQ=255)
  caatcagaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATc                                                                                            >  1:660223‑M1/91‑93 (MQ=255)
   aatcagaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATcc                                                                                           >  1:1358050‑M1/90‑93 (MQ=255)
   aatcagaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATcc                                                                                           >  2:1574283‑M1/90‑93 (MQ=255)
    cAGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATccc                                                                                          <  2:1063583/93‑1 (MQ=255)
    atcagaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATccc                                                                                          >  1:6697149‑M1/89‑93 (MQ=255)
    atcagaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATccc                                                                                          <  1:5773848‑M1/5‑1 (MQ=255)
    atcagaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATccc                                                                                          >  2:5240494‑M1/89‑93 (MQ=255)
     aGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCt                                                                                         <  1:1162729/93‑1 (MQ=255)
     aGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCt                                                                                         <  2:2103800/93‑1 (MQ=255)
      ggcggcTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTg                                                                                        <  2:3361274/93‑1 (MQ=255)
      ggcggcTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTg                                                                                        <  1:401755/93‑1 (MQ=255)
       agaggggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTgg                                                                                       <  2:4764602‑M1/8‑1 (MQ=255)
         ggcTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGcc                                                                                     >  1:1585030/1‑93 (MQ=255)
           cTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCa                                                                                   <  2:4578070/93‑1 (MQ=255)
            tCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCaa                                                                                  >  2:1339306/1‑93 (MQ=255)
            ggggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCaa                                                                                  <  1:6905454‑M1/13‑1 (MQ=255)
             cACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCaaa                                                                                 >  1:7424273/1‑93 (MQ=255)
              ggagaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCaaaa                                                                                <  1:234500‑M1/15‑1 (MQ=255)
                 ggcggcATTGACTTCACCCTTAACCTCAACAACTCCCGTCGATGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGc                                                                             <  1:7375604/93‑1 (MQ=255)
                 gaaatcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGc                                                                             <  2:4305576‑M1/18‑1 (MQ=255)
                  gcggcATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGcc                                                                            <  2:5809064/93‑1 (MQ=255)
                     tcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCggg                                                                         <  1:5417695‑M1/22‑1 (MQ=255)
                     tcctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCggg                                                                         >  1:6130992‑M1/72‑93 (MQ=255)
                      cATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCgggg                                                                        >  2:4206553/1‑93 (MQ=255)
                       ctccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGa                                                                       >  2:25740‑M1/70‑93 (MQ=255)
                        tccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGAt                                                                      <  2:3134651‑M1/25‑1 (MQ=255)
                         ccctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGAtt                                                                     >  1:7079628‑M1/68‑93 (MQ=255)
                          cctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGAttt                                                                    <  2:4438662‑M1/27‑1 (MQ=255)
                          cctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGAttt                                                                    <  2:2456461‑M1/27‑1 (MQ=255)
                           ctcacccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGAtttt                                                                   <  1:725191‑M1/28‑1 (MQ=255)
                            cTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGAttttt                                                                  <  1:5946421/93‑1 (MQ=255)
                             ttCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGAtttttt                                                                 >  1:1704545/1‑93 (MQ=255)
                               cccttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTtat                                                               <  1:6225954‑M1/32‑1 (MQ=255)
                                aCCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCCGGCCCAAAAAGCCGGGGATTTTTtata                                                              <  2:6426262/93‑1 (MQ=255)
                                  ttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATc                                                            <  1:4548956‑M1/35‑1 (MQ=255)
                                  ttgttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATc                                                            <  2:2886440‑M1/35‑1 (MQ=255)
                                    ttAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTg                                                          >  1:3200353/1‑93 (MQ=255)
                                    gttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTg                                                          <  1:4104621‑M1/37‑1 (MQ=255)
                                    gttcctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTg                                                          <  2:1659510‑M1/37‑1 (MQ=255)
                                       cctttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGt                                                       <  2:195988‑M1/40‑1 (MQ=255)
                                       aCCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGt                                                       <  2:325066/93‑1 (MQ=255)
                                       aCCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGt                                                       <  2:4634527/93‑1 (MQ=255)
                                         cTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTc                                                     >  2:6976657/1‑93 (MQ=255)
                                         cTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTc                                                     >  1:1459931/1‑93 (MQ=255)
                                          ttactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTcc                                                    >  1:884052‑M1/51‑93 (MQ=255)
                                          tCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTcc                                                    >  2:3809584/1‑93 (MQ=255)
                                           tactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCg                                                   <  1:1031326‑M1/44‑1 (MQ=255)
                                           tactttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCg                                                   <  2:6285289‑M1/44‑1 (MQ=255)
                                              tttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTa                                                <  1:7162263‑M1/47‑1 (MQ=255)
                                              tttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTa                                                <  1:4293968‑M1/47‑1 (MQ=255)
                                              caacTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTa                                                >  1:3497768/1‑93 (MQ=255)
                                               ttaggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTaa                                               <  2:6502417‑M1/48‑1 (MQ=255)
                                               aacTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTaa                                               >  2:876309/1‑93 (MQ=255)
                                                  ggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCtaaaag                                            >  1:3611754‑M1/43‑92 (MQ=255)
                                                  ggttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCtaaaag                                            >  1:437455‑M1/43‑92 (MQ=255)
                                                   gttgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGctaaaagg                                           <  2:3302618‑M1/52‑3 (MQ=255)
                                                     tgaaaaaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTg                                         >  2:6590080‑M1/40‑93 (MQ=255)
                                                      gTCGAAGAAAAAGCAGAGTAAACCCTCCTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGc                                        <  2:1502451/93‑1 (MQ=255)
                                                       tCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAATAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCa                                       <  2:3766717/93‑1 (MQ=255)
                                                       tCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCa                                       >  2:3889580/1‑93 (MQ=255)
                                                         gaagaaAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCaaa                                     >  1:977548/1‑93 (MQ=255)
                                                          aagaaAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAAt                                    <  2:7217417/93‑1 (MQ=255)
                                                          aaaaatcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAAt                                    >  2:2990711‑M1/35‑93 (MQ=255)
                                                            gaaAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGa                                  <  1:5351190/93‑1 (MQ=255)
                                                             aaaaaGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGAt                                 <  2:3563660/93‑1 (MQ=255)
                                                               tcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCa                               <  2:1819912‑M1/64‑1 (MQ=255)
                                                               tcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCa                               >  2:798926‑M1/30‑93 (MQ=255)
                                                               tcagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCa                               >  2:7269800‑M1/30‑93 (MQ=255)
                                                               aaaGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCa                               <  2:6821976/93‑1 (MQ=255)
                                                               aaaGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCa                               >  1:6404828/1‑93 (MQ=255)
                                                                cagcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAg                              >  2:1236088‑M1/29‑93 (MQ=255)
                                                                  gcgtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCagga                            <  1:4913378‑M1/67‑2 (MQ=255)
                                                                  gCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGgt                            <  2:7410408/93‑1 (MQ=255)
                                                                    gtcaagaaggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCtcaggacg                          <  2:607490‑M1/69‑4 (MQ=255)
                                                                     gagTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGgttgt                         >  1:4826020/1‑93 (MQ=255)
                                                                         aaaCCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTgca                     <  1:2831012/93‑1 (MQ=255)
                                                                           aggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTgcagc                   <  2:5470611‑M1/76‑1 (MQ=255)
                                                                           aggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTgcagc                   <  2:4934700‑M1/76‑1 (MQ=255)
                                                                           aCCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTgcagc                   >  2:2307405/1‑93 (MQ=255)
                                                                           aCCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTgcagc                   >  1:4691693/1‑93 (MQ=255)
                                                                           aCCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTgcagc                   <  1:3905500/93‑1 (MQ=255)
                                                                            ggtttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTtgcagcg                  <  1:2218845‑M1/77‑2 (MQ=255)
                                                                             ccTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCAt                 >  2:5020518/1‑93 (MQ=255)
                                                                              ctctTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCAtt                >  1:6511079/1‑93 (MQ=255)
                                                                               ttcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGttt               >  1:2095843‑M1/14‑93 (MQ=255)
                                                                               tctTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCAttt               >  1:3374120/1‑93 (MQ=255)
                                                                                tcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGtttt              >  2:4805826‑M1/13‑93 (MQ=255)
                                                                                tcattaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGtttt              <  1:2997678‑M1/81‑1 (MQ=255)
                                                                                  attaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGc            >  2:5642883‑M1/11‑93 (MQ=255)
                                                                                   ttaacacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCg           <  2:3680125‑M1/84‑1 (MQ=255)
                                                                                      acacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGa        <  2:6659525‑M1/87‑1 (MQ=255)
                                                                                       cacatATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGAc       >  1:6782106‑M1/6‑93 (MQ=255)
                                                                                         catATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTgaccg     <  2:4056776‑M1/90‑3 (MQ=255)
                                                                                          atATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGtgaccgc    >  1:1887109‑M1/3‑90 (MQ=255)
                                                                                           tATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAGGTGCAAATGCTCAGGACGTTGCAGCGTTTTGCGTGACCGCt   <  1:3755846‑M1/92‑1 (MQ=255)
                                                                                           aatCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCt   >  1:5105229/1‑93 (MQ=255)
                                                                                            |                                                                                            
GTTTCAGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAAACCCTCTTCCAGGAATAATCCCTGGCCCAAAAAGCCGGGGATTTTTTATATCTGCGTTCCGCTAAAAAGTGCAAATGATCAGGTTGTTGCAGCATTTTGCGTGACGGCTC  >  NC_000913/3192467‑3192651

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.