BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	4,091,572	3461 bp→GCATGCGGATCCTCTAGAGTCGACATATG		[rhaD]–rhaB	[rhaD], rhaA, rhaB

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4091572	4095032	3461	309 [0]	[0] 328	[rhaD]–rhaB	[rhaD],rhaA,rhaB

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4091571	0 (0.000)	218 (1.090) +GCATGCGGATCCTCTAGAGTCGACATATG	100/126	0.0	100%	coding (283/825 nt)	rhaD	rhamnulose‑phosphate aldolase
*	?	NC_000913	4095033 =	0 (0.000)	218 (1.090) +GCATGCGGATCCTCTAGAGTCGACATATG	100/126	0.0	100%	intergenic (‑4/‑284)	rhaB/rhaS	rhamnulokinase/RhaS

Only 100 of 309 total aligned reads displayed.

GTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACTTTTACGATGCCTAAGTTAGCCGCAGGATCAAGCTGGACGTTACGGAAGAATTTGCCCGAGCCGGTGACAATAAACGGTGTATTTGCCAGTA  >  NC_000913/4091479‑4091663

   ggAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgca                                                                                           <  1:6986324‑M1/93‑4 (MQ=255)

   ggAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgca                                                                                           <  1:1978061‑M1/93‑4 (MQ=255)

    gAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcat                                                                                          <  2:6787035‑M1/93‑5 (MQ=255)

    gAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcat                                                                                          <  2:6697265‑M1/93‑5 (MQ=255)

     aaaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatg                                                                                         >  1:4061919‑M1/1‑88 (MQ=255)

     aaaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatg                                                                                         >  2:1965712‑M1/1‑88 (MQ=255)

      aaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgc                                                                                        >  1:157483‑M1/1‑87 (MQ=255)

      aaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgc                                                                                        >  1:978554‑M1/1‑87 (MQ=255)

      aaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgc                                                                                        <  2:2247507‑M1/93‑7 (MQ=255)

       aGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcg                                                                                       >  2:4864615‑M1/1‑86 (MQ=255)

        ggAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcgg                                                                                      >  2:399246‑M1/1‑85 (MQ=255)

           aGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACtcatgcggatc                                                                                   >  2:2994698‑M1/1‑82 (MQ=255)

           aGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatc                                                                                   >  2:2447574‑M1/1‑82 (MQ=255)

           aGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatc                                                                                   <  2:2636514‑M1/93‑12 (MQ=255)

            gTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcc                                                                                  >  2:2464188‑M1/1‑81 (MQ=255)

             tGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcct                                                                                 >  2:5295112‑M1/1‑80 (MQ=255)

             tGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcct                                                                                 <  1:4324805‑M1/93‑14 (MQ=255)

              gAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctc                                                                                <  1:5291323‑M1/93‑15 (MQ=255)

                gCCGGAAGATGGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctcta                                                                              <  1:4554929‑M1/93‑17 (MQ=255)

                 ccGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctag                                                                             <  1:6019204‑M1/93‑18 (MQ=255)

                  cGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctaga                                                                            <  2:5349129‑M1/93‑19 (MQ=255)

                  cGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctaga                                                                            <  1:3170337‑M1/93‑19 (MQ=255)

                   ggAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagag                                                                           <  1:4189747‑M1/93‑20 (MQ=255)

                   ggAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagag                                                                           >  1:1138401‑M1/1‑74 (MQ=255)

                    gAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagt                                                                          >  1:2021228‑M1/1‑73 (MQ=255)

                    gAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagt                                                                          <  2:1588292‑M1/93‑21 (MQ=255)

                    gAAATTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagt                                                                          >  1:3062528‑M1/1‑73 (MQ=255)

                     aaGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtc                                                                         <  1:5026741‑M1/93‑22 (MQ=255)

                     aaGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtc                                                                         <  2:1087070‑M1/93‑22 (MQ=255)

                           ggAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacata                                                                   <  2:1917202‑M1/93‑28 (MQ=255)

                            gAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatat                                                                  >  2:7419956‑M1/1‑65 (MQ=255)

                            gAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatat                                                                  >  2:1309585‑M1/1‑65 (MQ=255)

                              aGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatgg                                                                >  1:927519‑M1/1‑63 (MQ=255)

                              aGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatgg                                                                >  2:4524396‑M1/1‑63 (MQ=255)

                               gTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggt                                                               <  2:3077418‑M1/93‑32 (MQ=255)

                               gTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCCCTGTCGACgcatgcggatcctctagagtcgacatatggt                                                               <  1:6215277‑M1/93‑32 (MQ=255)

                                tGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtg                                                              <  2:3548690‑M1/93‑33 (MQ=255)

                                tGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtg                                                              >  2:1781737‑M1/1‑61 (MQ=255)

                                 ggggACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtga                                                             <  1:2521616‑M1/93‑34 (MQ=255)

                                 ggggACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtga                                                             <  1:1202700‑M1/93‑34 (MQ=255)

                                 ggggACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtga                                                             <  1:6557556‑M1/93‑34 (MQ=255)

                                   ggACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatc                                                           <  2:5896448‑M1/93‑36 (MQ=255)

                                    gACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcc                                                          >  2:2531803‑M1/1‑57 (MQ=255)

                                    gACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcc                                                          <  1:3742962‑M1/93‑37 (MQ=255)

                                    gACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcc                                                          <  2:4992744‑M1/93‑37 (MQ=255)

                                    gACGGCTTCGTTAGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcc                                                          <  1:1017358‑M1/93‑37 (MQ=255)

                                     aCGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcct                                                         <  1:7315651‑M1/93‑38 (MQ=255)

                                          ttCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctga                                                    >  1:5852032‑M1/1‑51 (MQ=255)

                                           tCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaa                                                   >  1:1324710‑M1/1‑50 (MQ=255)

                                             gTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatt                                                 <  2:517045‑M1/93‑46 (MQ=255)

                                              ttGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaattt                                                <  1:1721369‑M1/93‑47 (MQ=255)

                                              ttGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaattt                                                >  2:2102911‑M1/1‑47 (MQ=255)

                                              ttGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaattt                                                <  2:7244122‑M1/93‑47 (MQ=255)

                                               tGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttc                                               <  1:4782277‑M1/93‑48 (MQ=255)

                                               tGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttc                                               >  1:7427077‑M1/1‑46 (MQ=255)

                                                ggTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttca                                              <  2:3345263‑M1/93‑49 (MQ=255)

                                                ggTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttca                                              <  2:5717124‑M1/93‑49 (MQ=255)

                                                ggTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttca                                              >  2:2848820‑M1/1‑45 (MQ=255)

                                                 gTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcat                                             <  1:6684861‑M1/93‑50 (MQ=255)

                                                 gTTAACCCCCAAAGAATGTGGTAGACCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcat                                             >  2:7359572‑M1/1‑44 (MQ=255)

                                                    aaCCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattac                                          <  1:5193950‑M1/93‑53 (MQ=255)

                                                    aaCCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattac                                          <  1:5765471‑M1/93‑53 (MQ=255)

                                                      cccccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacga                                        <  1:3452544‑M1/93‑55 (MQ=255)

                                                      cccccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacga                                        <  1:237481‑M1/93‑55 (MQ=255)

                                                       ccccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgac                                       <  2:4373489‑M1/93‑56 (MQ=255)

                                                       ccccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgac                                       >  2:2676932‑M1/1‑38 (MQ=255)

                                                        cccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgacc                                      <  2:6099338‑M1/93‑57 (MQ=255)

                                                          cAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccag                                    >  1:1430461‑M1/1‑35 (MQ=255)

                                                          cAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccag                                    <  2:6567198‑M1/93‑59 (MQ=255)

                                                            aaGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtc                                  >  1:7079066‑M1/1‑33 (MQ=255)

                                                            aaGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtc                                  >  2:3857882‑M1/1‑33 (MQ=255)

                                                            aaGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtc                                  >  2:7024596‑M1/1‑33 (MQ=255)

                                                             aGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtct                                 >  1:6585397‑M1/1‑32 (MQ=255)

                                                               aaTGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaa                               <  1:2744271‑M1/93‑64 (MQ=255)

                                                                 tgtgGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaa                             <  2:6243466‑M1/93‑66 (MQ=255)

                                                                  gtgGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaa                            <  2:5212683‑M1/93‑67 (MQ=255)

                                                                     gTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcg                         <  1:6301583‑M1/93‑70 (MQ=255)

                                                                     gTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcg                         <  1:5473701‑M1/93‑70 (MQ=255)

                                                                       aGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcc                       >  1:2057856‑M1/1‑22 (MQ=255)

                                                                       aGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcc                       <  2:425539‑M1/93‑72 (MQ=255)

                                                                        gCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcct                      >  1:3243328‑M1/1‑21 (MQ=255)

                                                                        gCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcct                      >  2:2163461‑M1/1‑21 (MQ=255)

                                                                           cgcgCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaa                   <  1:4110547‑M1/93‑76 (MQ=255)

                                                                           cgcgCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaa                   >  2:5527122‑M1/1‑18 (MQ=255)

                                                                             cgcCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaatt                 <  2:83373‑M1/93‑78 (MQ=255)

                                                                              gcCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattc                >  1:617201‑M1/1‑15 (MQ=255)

                                                                              gcCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattc                <  2:6948203‑M1/93‑79 (MQ=255)

                                                                              gcCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattc                <  1:1819798‑M1/93‑79 (MQ=255)

                                                                               ccGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcg               >  1:1861816‑M1/1‑14 (MQ=255)

                                                                               ccGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcg               >  1:3560605‑M1/1‑14 (MQ=255)

                                                                                cGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgc              <  2:1208958‑M1/93‑81 (MQ=255)

                                                                                 gTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcg             >  2:1031990‑M1/1‑12 (MQ=255)

                                                                                 gTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcg             >  2:7516189‑M1/1‑12 (MQ=255)

                                                                                  tCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcga            <  1:2440285‑M1/93‑83 (MQ=255)

                                                                                  tCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcga            >  2:6635828‑M1/1‑11 (MQ=255)

                                                                                  tCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcga            >  2:4292333‑M1/1‑11 (MQ=255)

                                                                                     cTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgacct         >  1:6467735‑M1/1‑8 (MQ=255)

                                                                                      tGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgacctt        >  1:1240031‑M1/1‑7 (MQ=255)

                                                                                      tGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgacctt        <  1:4449700‑M1/93‑87 (MQ=255)

                                                                                            cgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgtt  >  1:4691850‑M1/1‑1 (MQ=255)

GTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACTTTTACGATGCCTAAGTTAGCCGCAGGATCAAGCTGGACGTTACGGAAGAATTTGCCCGAGCCGGTGACAATAAACGGTGTATTTGCCAGTA  >  NC_000913/4091479‑4091663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`