BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,912,095	0	T	C	72.6%	367.8 / 205.2	263	S310G (AGT→GGT)	ygcA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (39/33); new base C (103/88); total (142/121)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.15e-02
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 265 total aligned reads displayed.

GTGATAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGCACATCCAGCCATTCCA  >  NC_000913/2912003‑2912187

gTGATAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACt                                                                                              >  2:3212641/1‑93 (MQ=255)

  gATAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTgg                                                                                            >  1:1778833/1‑93 (MQ=255)

  gATAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCgg                                                                                            >  2:6365389/1‑93 (MQ=255)

  gATAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCgg                                                                                            >  1:2117063/1‑93 (MQ=255)

    tAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCa                                                                                          >  1:3941242/1‑93 (MQ=255)

    tAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCa                                                                                          >  1:3145898/1‑93 (MQ=255)

    tAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCa                                                                                          <  2:7509197/93‑1 (MQ=255)

       aaCGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCt                                                                                       >  1:2570214/1‑93 (MQ=255)

        aCGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCtt                                                                                      >  2:5502519/1‑93 (MQ=255)

        aCGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCtt                                                                                      <  2:5432253/93‑1 (MQ=255)

          gTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACATCGACCACACCGGCAGCTtgt                                                                                    >  1:7218409/1‑93 (MQ=255)

          gTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTtgt                                                                                    >  1:4216108/1‑93 (MQ=255)

          gTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTtgt                                                                                    <  1:4769786/93‑1 (MQ=255)

          gTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTtgt                                                                                    >  2:6063108/1‑93 (MQ=255)

           tCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTtgtg                                                                                   <  2:5971767/93‑1 (MQ=255)

           tCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTtgtg                                                                                   >  1:7332875/1‑93 (MQ=255)

           tCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTtgtg                                                                                   >  1:613032/1‑93 (MQ=255)

           tCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGCCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTtgtg                                                                                   <  2:1746911/93‑1 (MQ=255)

            cacaTTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTgtgt                                                                                  <  2:6825394/93‑1 (MQ=255)

               aTTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGc                                                                               <  2:6892703/93‑1 (MQ=255)

               aTTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGc                                                                               >  1:3502551/1‑93 (MQ=255)

                ttCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGcc                                                                              >  1:5773605/1‑93 (MQ=255)

                  cTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCaa                                                                            <  1:4009118/93‑1 (MQ=255)

                   tGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAAt                                                                           >  2:1167344/1‑93 (MQ=255)

                       aGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCa                                                                       >  1:2612337/1‑93 (MQ=255)

                        gCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAg                                                                      >  1:2753142/1‑93 (MQ=255)

                        gCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAg                                                                      <  1:1643419/93‑1 (MQ=255)

                         ccATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAgt                                                                     <  2:561798/93‑1 (MQ=255)

                         ccATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAgt                                                                     <  1:2885812/93‑1 (MQ=255)

                          cATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAgtg                                                                    >  1:1135974/1‑93 (MQ=255)

                           aTTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAgtgt                                                                   <  1:384145/93‑1 (MQ=255)

                           aTTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAgtgt                                                                   >  2:4897269/1‑93 (MQ=255)

                            ttAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTa                                                                  >  1:5124687/1‑93 (MQ=255)

                             tAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTaa                                                                 <  2:1331780/93‑1 (MQ=255)

                              aaGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTaaa                                                                <  1:2509680/93‑1 (MQ=255)

                              aaGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTaaa                                                                <  1:2251906/93‑1 (MQ=255)

                                gACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGt                                                              >  1:5984900/1‑93 (MQ=255)

                                   gcgcATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGc                                                           <  2:3058749/93‑1 (MQ=255)

                                     gcATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGccc                                                         >  1:5539600/1‑93 (MQ=255)

                                      cATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCa                                                        <  1:3871960/93‑1 (MQ=255)

                                       aTTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCAt                                                       >  2:3533988/1‑93 (MQ=255)

                                       aTTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCAt                                                       >  2:5889457/1‑93 (MQ=255)

                                       aTTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCAt                                                       >  2:7238119/1‑93 (MQ=255)

                                        ttCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATa                                                      <  1:2870308/93‑1 (MQ=255)

                                        ttCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATa                                                      <  2:6520936/93‑1 (MQ=255)

                                         tCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATAc                                                     <  2:293987/93‑1 (MQ=255)

                                         tCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATAc                                                     <  1:1316450/93‑1 (MQ=255)

                                         tCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATAc                                                     <  2:1526620/93‑1 (MQ=255)

                                          ctgctgGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATAcc                                                    >  1:6617679/1‑93 (MQ=255)

                                          ctgctgGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATAcc                                                    <  2:4371121/93‑1 (MQ=255)

                                          ctgctgGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATAcc                                                    <  1:3571289/93‑1 (MQ=255)

                                            gctgGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGc                                                  >  1:5913194/1‑93 (MQ=255)

                                            gctgGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGc                                                  <  2:4760283/93‑1 (MQ=255)

                                             ctgGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCa                                                 <  1:1232930/93‑1 (MQ=255)

                                             ctgGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCa                                                 <  2:3168314/93‑1 (MQ=255)

                                               ggCCTTTTTCCCCCAGCGCCGGAACACCTTCTACACCGACCCCACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGa                                               <  1:267666/93‑1 (MQ=255)

                                               ggCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGa                                               >  2:5736192/1‑93 (MQ=255)

                                                 ccTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAAc                                             <  1:1854006/93‑1 (MQ=255)

                                                  cTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACa                                            <  2:6188527/93‑1 (MQ=255)

                                                   tttttCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAg                                           >  1:2007874/1‑93 (MQ=255)

                                                    ttttCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGa                                          >  1:2199570/1‑93 (MQ=255)

                                                    ttttCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGa                                          >  2:2706992/1‑93 (MQ=255)

                                                     tttCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGAt                                         <  2:3282908/93‑1 (MQ=255)

                                                      ttCCACCAGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATc                                        >  2:7081352/1‑93 (MQ=255)

                                                       tCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATcc                                       <  1:632717/93‑1 (MQ=255)

                                                        ccaccaGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCa                                      <  2:5119293/93‑1 (MQ=255)

                                                         caccaGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAg                                     >  1:2528353/1‑93 (MQ=255)

                                                         caccaGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAg                                     <  1:5224334/93‑1 (MQ=255)

                                                           ccaGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTa                                   <  2:2404631/93‑1 (MQ=255)

                                                           ccaGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTa                                   <  2:2438116/93‑1 (MQ=255)

                                                           ccaGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTa                                   <  2:2498762/93‑1 (MQ=255)

                                                            caGCGCCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTAc                                  >  1:3294287/1‑93 (MQ=255)

                                                              gcgcCGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTAcgc                                <  1:5713627/93‑1 (MQ=255)

                                                                  cGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATc                            <  1:6424280/93‑1 (MQ=255)

                                                                  cGGAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATc                            <  2:2073574/93‑1 (MQ=255)

                                                                   ggAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCt                           >  2:1065541/1‑93 (MQ=255)

                                                                    gAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCtt                          >  2:2288249/1‑93 (MQ=255)

                                                                    gAACACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCtt                          >  1:3656340/1‑93 (MQ=255)

                                                                     aaCACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTc                         <  2:6543254/93‑1 (MQ=255)

                                                                     aaCACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTc                         >  1:447881/1‑93 (MQ=255)

                                                                     aaCACCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTc                         <  2:6783069/93‑1 (MQ=255)

                                                                      acacCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCa                        >  2:7419380/1‑93 (MQ=255)

                                                                      acacCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCa                        >  2:1606323/1‑93 (MQ=255)

                                                                      acacCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCa                        >  2:4387353/1‑93 (MQ=255)

                                                                      acacCTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCa                        >  1:2793693/1‑93 (MQ=255)

                                                                         ccTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGt                     <  1:6413707/93‑1 (MQ=255)

                                                                          cTTCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGtt                    <  1:6120444/93‑1 (MQ=255)

                                                                           ttCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTg                   >  2:4185054/1‑93 (MQ=255)

                                                                           ttCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTg                   >  1:7032531/1‑93 (MQ=255)

                                                                           ttCTACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTg                   >  1:4375692/1‑93 (MQ=255)

                                                                              tACACCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGcac                <  2:860472/93‑1 (MQ=255)

                                                                               acacCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGcaca               >  2:6931431/1‑93 (MQ=255)

                                                                               acacCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGcaca               >  2:1867215/1‑93 (MQ=255)

                                                                                 acCGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGCACATc             <  2:3370163/93‑1 (MQ=255)

                                                                                  ccGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGCACATcc            <  2:1909764/93‑1 (MQ=255)

                                                                                   cGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTAAAAAGTTGCCCATACCGCAGAACAGATCTTGTACGCGATCTTCAGGTTGCACATCCa           <  1:2985078/93‑1 (MQ=255)

                                                                                   cGACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGCACATCCa           <  2:5042218/93‑1 (MQ=255)

                                                                                    gACCACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGCACATCCAg          <  2:2133765/93‑1 (MQ=255)

                                                                                      ccACACCGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGCACATCCAGcc        <  1:5385199/93‑1 (MQ=255)

                                                                                        acacTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGCACATCCAGCCAt      >  1:1485146/1‑93 (MQ=255)

GTGATAAAACGTCACATTCTGTAAGCCATTAAGACGCGCATTCTGCTGGCCTTTTTCCACCAGCGCCGGAACACCTTCTACACCGACCACACTGGCAGCTTGTGTCGCCAATGGCAGTGTAAAGTTGCCCATACCGCAGAACAGATCCAGTACGCGATCTTCAGGTTGCACATCCAGCCATTCCA  >  NC_000913/2912003‑2912187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`