Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,725,7391.C74.9% 465.9 / 151.8 184coding (1262/1455 nt)xylBxylulokinase
Reads supporting (aligned to +/- strand):  ref base . (28/18);  new base C (86/51);  total (115/69)
Fisher's exact test for biased strand distribution p-value = 8.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 213 total aligned reads displayed.

CTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTA  >  NC_000913/3725647‑3725831
                                                                                              |                                                                                             
cTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑t                                                                                                >  1:1720721/1‑93 (MQ=255)
cTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑t                                                                                                >  2:3250378/1‑93 (MQ=255)
 tAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑c                                                                                             >  2:5140098/1‑93 (MQ=255)
 tAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑c                                                                                             >  2:2473965/1‑93 (MQ=255)
  aaCGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTTGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTCGCCCCACA‑T‑‑cc                                                                                            >  1:6354623/1‑93 (MQ=255)
   aCGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑ccc                                                                                           >  2:4170828/1‑93 (MQ=255)
      gTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCTGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑tccccc                                                                                        >  2:4273424/1‑93 (MQ=255)
      gTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑cccccc                                                                                        <  1:446280/93‑1 (MQ=255)
      gTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑cccccc                                                                                        >  2:3702269/1‑93 (MQ=255)
       tAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑ccccccc                                                                                       >  1:3129970/1‑93 (MQ=255)
       tAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑ccccccc                                                                                       <  2:497013/93‑1 (MQ=255)
       tAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑ccccccc                                                                                       >  1:4628849/1‑93 (MQ=255)
         gTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑ccccccccc                                                                                     >  2:3566385/1‑92 (MQ=255)
           tGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑cccccccccgt                                                                                   <  1:7474235/93‑4 (MQ=255)
           tGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCgca                                                                                   >  1:4017649/1‑91 (MQ=255)
              ggCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACg                                                                                 >  2:2075669/1‑93 (MQ=255)
               gCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACgg                                                                                >  2:4596176/1‑93 (MQ=255)
               gCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGt                                                                               >  1:1466687/1‑93 (MQ=255)
                 aacaaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTa                                                                              >  1:3644164/1‑93 (MQ=255)
                  acagTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACCGTaa                                                                             >  1:1858537/1‑93 (MQ=255)
                   caaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACAGC‑‑CCCCCCCCGTACGGTAAt                                                                            <  2:4778934/93‑1 (MQ=255)
                   caaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAAt                                                                            <  2:5889601/93‑1 (MQ=255)
                   caaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAAt                                                                            <  2:7103303/93‑1 (MQ=255)
                   caaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAAt                                                                            <  2:7189116/93‑1 (MQ=255)
                   caaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGCAAt                                                                            >  1:477240/1‑93 (MQ=255)
                    aaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATc                                                                           >  2:736479/1‑93 (MQ=255)
                    aaTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCg                                                                          >  2:1338278/1‑93 (MQ=255)
                     aTTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCCTACGGTAATCg                                                                          >  1:5866875/1‑93 (MQ=255)
                       tCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCCTACGGTAATCCAg                                                                        >  1:6482821/1‑93 (MQ=255)
                        cAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAgc                                                                       <  2:2971356/93‑1 (MQ=255)
                        cAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAgc                                                                       <  2:3920955/93‑1 (MQ=255)
                         aaTGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAgct                                                                      >  1:6925016/1‑93 (MQ=255)
                           tGAGCGTTTTCTCGGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACACC‑‑CCCCCCCCGTACGGTAATCGAgctgc                                                                    <  2:5977566/93‑1 (MQ=255)
                           tGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAgctgc                                                                    >  1:776686/1‑93 (MQ=255)
                           tGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAgctgc                                                                    >  1:3485100/1‑93 (MQ=255)
                            gAGCGATTTCTCTGGATTCGCCGCGTTCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAgctgct                                                                   >  1:1935759/1‑93 (MQ=255)
                             aGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGGACGGTAATCGAGCTGCTGa                                                                 >  1:2733910/1‑93 (MQ=255)
                                gATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TCCCCCCCCCCCTACGGTAATCGAGCTGCTGAc                                                                >  1:3396538/1‑93 (MQ=255)
                                 aTTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCg                                                              >  2:4851390/1‑93 (MQ=255)
                                 aTTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCg                                                              <  1:3277898/93‑1 (MQ=255)
                                    tctcTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTg                                                           >  1:3858708/1‑93 (MQ=255)
                                     ctntNNANTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTNGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGa                                                          <  1:6377451/93‑1 (MQ=255)
                                     ctctGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGa                                                          >  1:5657242/1‑93 (MQ=255)
                                     ctctGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGa                                                          <  1:4301319/93‑1 (MQ=255)
                                     ctctGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCCTACGGTAATCGAGCTGCTGACCGCTGa                                                          >  1:4371025/1‑93 (MQ=255)
                                      tctGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGata                                                        <  1:2776615/93‑1 (MQ=255)
                                      tctGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGata                                                        <  2:2564381/93‑1 (MQ=255)
                                       ctGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGata                                                        >  2:3400880/1‑93 (MQ=255)
                                        tGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGatat                                                       >  2:4612119/1‑93 (MQ=255)
                                         ggATTCGCCTCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGTCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATc                                                      <  1:6123708/93‑1 (MQ=255)
                                         ggATTCGCCGCAATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGTCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATc                                                      <  1:548576/93‑1 (MQ=255)
                                          gATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATcc                                                     >  1:5888908/1‑93 (MQ=255)
                                          gATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATcc                                                     >  2:1287821/1‑93 (MQ=255)
                                          gATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCCTACGGTAATCGAGCTGCTGACCGCTGATATcc                                                     >  2:6571247/1‑93 (MQ=255)
                                            ttCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGc                                                   <  2:947540/93‑1 (MQ=255)
                                            ttCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCCTACGGTAATCGAGCTGCCGACCCCTGATATCCGc                                                   >  1:6232709/1‑93 (MQ=255)
                                            ttCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGcc                                                  >  2:7280075/1‑93 (MQ=255)
                                               gccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAg                                                <  1:6630651/93‑1 (MQ=255)
                                               gccgcGATCTGCGCCAGCCTTGCTGCGCCCAGTGCCGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCCCCAg                                                >  1:1570239/1‑93 (MQ=255)
                                                 cgcgATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCa                                              <  1:3017539/93‑1 (MQ=255)
                                                 cgcgATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCa                                              >  2:1134301/1‑93 (MQ=255)
                                                  gcgATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCAt                                             >  1:480117/1‑93 (MQ=255)
                                                   cgATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATc                                            <  2:3585123/93‑1 (MQ=255)
                                                    gATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCt                                           >  2:4386859/1‑93 (MQ=255)
                                                     aTCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTg                                          >  2:3076745/1‑93 (MQ=255)
                                                     aTCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTg                                          <  2:5366518/93‑1 (MQ=255)
                                                      tCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTACTCGCGCTGCTAACCCCTGTTATCCACCAGCACCTGa                                         >  2:2120871/1‑93 (MQ=255)
                                                      tCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGa                                         <  1:2670876/93‑1 (MQ=255)
                                                      tCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGa                                         <  1:3541359/93‑1 (MQ=255)
                                                      tCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGAc                                        >  2:3787728/1‑93 (MQ=255)
                                                       cTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACg                                       <  2:2250848/93‑1 (MQ=255)
                                                        tGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAACGGCTGACCGCTGATTTCCGCCAGCATCTGagc                                       >  2:6705233/1‑91 (MQ=255)
                                                            ccAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAg                                   >  1:919858/1‑93 (MQ=255)
                                                            ccAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAg                                   <  2:5634522/93‑1 (MQ=255)
                                                             cAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TCCCCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAg                                   <  2:4921075/93‑1 (MQ=255)
                                                             cAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGt                                  >  2:1096946/1‑93 (MQ=255)
                                                             cAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGt                                  >  2:7164488/1‑93 (MQ=255)
                                                              aGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTAc                                <  2:5046001/93‑1 (MQ=255)
                                                               gCCTTGCTGCGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTAc                                >  1:1005555/1‑93 (MQ=255)
                                                               gCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACt                               >  2:6316041/1‑93 (MQ=255)
                                                                 cTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCa                             >  2:894705/1‑93 (MQ=255)
                                                                  ttGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCAc                            <  1:6781526/93‑1 (MQ=255)
                                                                     ctgcGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTa                          <  2:2310490/93‑1 (MQ=255)
                                                                      tgcGCCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTAc                         >  2:1648802/1‑93 (MQ=255)
                                                                         gcCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGGAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTAcgcg                      >  1:5387074/1‑93 (MQ=255)
                                                                         gcCCAGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGGAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTAcgcg                      >  1:5710115/1‑93 (MQ=255)
                                                                          cccAGTGCTGGCCCCACACC‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACgcgc                     <  2:3960240/93‑1 (MQ=255)
                                                                            cAGTGCTGGCCCCACA‑TC‑CCCCCCCCGGACGGTAATCGAGCTGCTGACCGCTGATATCCGCCCGCATCTGACGCCCGTACTCACTACGcgccc                   >  1:52560/1‑93 (MQ=255)
                                                                            cAGTGCTGGCCCCACA‑TC‑CCCCCCCCGCACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTTACGCCAGTACTCACCACGccccc                   >  1:137271/1‑93 (MQ=255)
                                                                             aGTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGcgcccc                  <  2:2328541/93‑1 (MQ=255)
                                                                              gTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGTCCGCTGATATCCGCCAGCATCTCACGCCCGTACTCACTACGcgccccg                 >  1:6834244/1‑93 (MQ=255)
                                                                              gTGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGcgccccg                 >  1:4721100/1‑93 (MQ=255)
                                                                               tGCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGcgccccgc                <  1:1587241/93‑1 (MQ=255)
                                                                                gCTGGCCCCACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGcgccccgcc               >  2:1737600/1‑93 (MQ=255)
                                                                                      cccACA‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAAt         <  2:1914162/93‑1 (MQ=255)
                                                                                       ccACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCa       >  1:2414000/1‑93 (MQ=255)
                                                                                        caca‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCa       >  2:6494275/1‑93 (MQ=255)
                                                                                        caca‑TC‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCa       >  2:6089898/1‑93 (MQ=255)
                                                                                         aca‑c‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAAc     <  1:6523681/93‑1 (MQ=255)
                                                                                             t‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTa  >  2:5257161/1‑93 (MQ=255)
                                                                                              |                                                                                             
CTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCCCAGTGCTGGCCCCACA‑T‑‑CCCCCCCCGTACGGTAATCGAGCTGCTGACCGCTGATATCCGCCAGCATCTGACGCCAGTACTCACTACGCGCCCCGCCCCCAATCAACGTA  >  NC_000913/3725647‑3725831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑