Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,916,1680AG74.4% 526.1 / 259.0 347S440P (TCC→CCC) atpAmembrane‑bound ATP synthase, F1 sector, alpha‑subunit
Reads supporting (aligned to +/- strand):  ref base A (44/45);  new base G (134/124);  total (178/169)
Fisher's exact test for biased strand distribution p-value = 7.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.97e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 348 total aligned reads displayed.

AGCGGCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCA  >  NC_000913/3916076‑3916259
                                                                                            |                                                                                           
  cGGCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACa                                                                                           <  2:1255681/93‑1 (MQ=255)
    gCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATc                                                                                         <  2:3876723/93‑1 (MQ=255)
    gCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATc                                                                                         <  2:159045/93‑1 (MQ=255)
     cTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCg                                                                                        <  1:3775012/93‑1 (MQ=255)
     cTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCg                                                                                        >  1:7442689/1‑93 (MQ=255)
      ttCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCgg                                                                                       >  2:2853410/1‑93 (MQ=255)
       tCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGgc                                                                                      >  2:1797185/1‑93 (MQ=255)
       tCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGgc                                                                                      >  1:4050702/1‑93 (MQ=255)
         gAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGgcgc                                                                                    >  1:6945938/1‑93 (MQ=255)
         gAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGgcgc                                                                                    >  2:2112933/1‑93 (MQ=255)
           aGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCAt                                                                                  >  2:1334185/1‑93 (MQ=255)
           aGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCAt                                                                                  >  2:2425398/1‑93 (MQ=255)
            gCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATa                                                                                 >  1:4818447/1‑93 (MQ=255)
            gCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCAtg                                                                                 <  2:7321121/93‑2 (MQ=255)
              tGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATAct                                                                               >  1:622864/1‑93 (MQ=255)
                ccAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATActgt                                                                             <  1:2198907/93‑1 (MQ=255)
                  aaTTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgttt                                                                           >  2:7455733/1‑93 (MQ=255)
                  aaTTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATActgttt                                                                           <  2:1439792/93‑1 (MQ=255)
                   aTTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgtttc                                                                          <  2:1126752/93‑1 (MQ=255)
                   aTTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgtttc                                                                          <  1:1746636/93‑1 (MQ=255)
                   aTTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgtttc                                                                          <  1:1317905/93‑1 (MQ=255)
                   aTTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATActgtttc                                                                          <  1:3545476/93‑1 (MQ=255)
                    ttttCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgtttct                                                                         <  2:446901/93‑1 (MQ=255)
                    ttttCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgtttct                                                                         <  1:2413291/93‑1 (MQ=255)
                     tttCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgtttctg                                                                        >  2:21837/1‑93 (MQ=255)
                     tttCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgtttctg                                                                        <  2:3193779/93‑1 (MQ=255)
                        cGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATActgtttctgttt                                                                     >  2:3531982/1‑93 (MQ=255)
                         gACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACtgtttctgtttc                                                                    <  2:506774/93‑1 (MQ=255)
                          aCAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTca                                                                   <  2:6493212/93‑1 (MQ=255)
                          aCAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTca                                                                   <  1:3033200/93‑1 (MQ=255)
                          aCAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTca                                                                   <  1:6491966/93‑1 (MQ=255)
                          aCAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTca                                                                   <  2:5745151/93‑1 (MQ=255)
                           cAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTcag                                                                  >  2:7008614/1‑93 (MQ=255)
                             gTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTcagca                                                                >  2:3065858/1‑93 (MQ=255)
                             gTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTcagca                                                                <  1:2140331/93‑1 (MQ=255)
                             gTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTcagca                                                                <  2:2908374/93‑1 (MQ=255)
                              ttCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTcagcag                                                               <  2:906664/93‑1 (MQ=255)
                              ttCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTcagcag                                                               <  2:5929214/93‑1 (MQ=255)
                              ttCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTcagcag                                                               >  2:4547132/1‑93 (MQ=255)
                              ttCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTcagcag                                                               <  1:2582093/93‑1 (MQ=255)
                              ttCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTcagcag                                                               <  2:5707990/93‑1 (MQ=255)
                               tCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGt                                                              >  1:1863506/1‑93 (MQ=255)
                                cAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGtt                                                             >  2:4438232/1‑93 (MQ=255)
                                 aaCATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTc                                                            <  2:4581408/93‑1 (MQ=255)
                                 aaCATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTc                                                            <  1:4216998/93‑1 (MQ=255)
                                  aCATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCg                                                           >  1:6583695/1‑93 (MQ=255)
                                  aCATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCg                                                           >  2:3579411/1‑93 (MQ=255)
                                   cATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCgg                                                          <  1:3426582/93‑1 (MQ=255)
                                   cATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCgg                                                          <  2:151266/93‑1 (MQ=255)
                                   cATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCgg                                                          >  2:4118315/1‑93 (MQ=255)
                                    aTCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGt                                                         >  2:4345237/1‑93 (MQ=255)
                                     tCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTc                                                        >  1:7086912/1‑93 (MQ=255)
                                     tCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTc                                                        >  2:6683764/1‑93 (MQ=255)
                                     tCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTc                                                        >  2:6176587/1‑93 (MQ=255)
                                     tCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTc                                                        >  2:4030437/1‑93 (MQ=255)
                                     tCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTc                                                        >  1:769499/1‑93 (MQ=255)
                                      ccGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCa                                                       <  1:1134605/93‑1 (MQ=255)
                                       cGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCAc                                                      >  1:582811/1‑93 (MQ=255)
                                          cAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACttt                                                   >  2:4816343/1‑93 (MQ=255)
                                           aGGTATCCACGTTCTGCTGCGAACAGAGCCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTc                                                  <  1:942364/93‑1 (MQ=255)
                                           aGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTc                                                  >  1:2664979/1‑93 (MQ=255)
                                            ggTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCt                                                 <  2:5569812/93‑1 (MQ=255)
                                               aaCCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGAc                                              <  2:2526233/93‑1 (MQ=255)
                                                aCCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGAcc                                             <  2:5373180/93‑1 (MQ=255)
                                                aCCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGAcc                                             >  2:1468420/1‑93 (MQ=255)
                                                 ccACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCg                                            >  2:5541984/1‑93 (MQ=255)
                                                  cACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGt                                           >  1:2854668/1‑93 (MQ=255)
                                                   aCGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTg                                          >  2:1843581/1‑93 (MQ=255)
                                                     gTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGt                                        >  1:5420727/1‑93 (MQ=255)
                                                        ctgctgCGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCaa                                     >  1:1003505/1‑93 (MQ=255)
                                                        ctgctgCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCaa                                     >  2:6793160/1‑93 (MQ=255)
                                                          gctgcGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAgc                                   >  2:7511206/1‑93 (MQ=255)
                                                          gctgcGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAgc                                   >  2:675164/1‑93 (MQ=255)
                                                          gctgcGAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAgc                                   >  1:6536098/1‑93 (MQ=255)
                                                               gAACAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCtt                              <  1:4150162/93‑1 (MQ=255)
                                                                aaCAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTa                             >  2:3303063/1‑93 (MQ=255)
                                                                 aCAGAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTAc                            <  2:1919147/93‑1 (MQ=255)
                                                                   aGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACgt                          >  2:2665448/1‑93 (MQ=255)
                                                                    gAACCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACgtg                         >  1:1194316/1‑93 (MQ=255)
                                                                      aCCAGAGACTGCTGCGCAACTGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGtt                       >  2:4302204/1‑93 (MQ=255)
                                                                      aCCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGtt                       >  2:392725/1‑93 (MQ=255)
                                                                      aCCAGAGACTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGtt                       >  1:4545785/1‑93 (MQ=255)
                                                                       ccAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTg                      <  1:6455401/93‑1 (MQ=255)
                                                                        cAGAGACTGCTGCGCAACGGGCATCGTCGCATTCTGTTTCTTTTTCAGCAGTTCGGTCACGTTCTGACCGTGGTCAAGCTGCTTACGTGTTGc                     <  1:4320783/93‑1 (MQ=255)
                                                                          gagaCTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCAt                   <  1:5692027/93‑1 (MQ=255)
                                                                           agaCTGCTGCGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATc                  >  1:1651565/1‑93 (MQ=255)
                                                                             aCTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGt                <  1:6779346/93‑1 (MQ=255)
                                                                                gctgcGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCaa             >  1:7353211/1‑93 (MQ=255)
                                                                                gctgcGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCaa             <  2:7100181/93‑1 (MQ=255)
                                                                                gctgcGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCaa             >  2:6016093/1‑93 (MQ=255)
                                                                                gctgcGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCaa             <  1:3842847/93‑1 (MQ=255)
                                                                                gctgcGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCaa             <  1:5083878/93‑1 (MQ=255)
                                                                                  tgcGCAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAgg           <  1:3747289/93‑1 (MQ=255)
                                                                                   gcgcAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGt          <  2:2597761/93‑1 (MQ=255)
                                                                                     gcAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCg        >  2:3665525/1‑93 (MQ=255)
                                                                                      cAACGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCgg       >  1:2754430/1‑93 (MQ=255)
                                                                                       aaCGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGa      >  2:4889576/1‑93 (MQ=255)
                                                                                       aaCGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGa      >  2:6871339/1‑93 (MQ=255)
                                                                                        aCGGGCATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGAt     >  1:4278762/1‑93 (MQ=255)
                                                                                          ggACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGc   >  2:5234153/1‑93 (MQ=255)
                                                                                            |                                                                                           
AGCGGCTTCGAAGCTGCCAATTTTCGACAGTTCAACATCCGCCAGGTAACCACGTTCTGCTGCGAACAGAACCAGAGACTGCTGCGCAACGGACATCGGCGCATACTGTTTCTGTTTCAGCAGTTCGGTCACTTTCTGACCGTGGTCAAGCTGCTTACGTGTTGCATCGTCAAGGTCGGATGCA  >  NC_000913/3916076‑3916259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑