| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 562,546 | A→G | intergenic (+4/‑7) | sfmH → / → sfmF | involved in fimbrial asembly/putative fimbrial‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 562,546 | 0 | A | G | 84.5% | 576.1 / 97.7 | 258 | intergenic (+4/‑7) | sfmH/sfmF | involved in fimbrial asembly/putative fimbrial‑like protein |
| Reads supporting (aligned to +/- strand): ref base A (19/21); new base G (99/119); total (118/140) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.07e-01 | |||||||||||
Only 100 of 258 total aligned reads displayed.
TCGCGCCTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTAATA > NC_000913/562455‑562637 | tCGCGCCTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTAc < 2:5281518/93‑1 (MQ=255) cgcgCCTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCg > 2:2553727/1‑93 (MQ=255) cgcgCCTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACg < 2:753403/93‑1 (MQ=255) gcCTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGgag > 2:6059311/1‑93 (MQ=255) ccTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGgaga > 1:1129117/1‑93 (MQ=255) cTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGaa < 1:1254200/93‑1 (MQ=255) cTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCACTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGaa < 1:19820/93‑1 (MQ=255) tGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAAt < 2:168168/93‑1 (MQ=255) ccTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATgag < 1:1571764/93‑1 (MQ=255) tATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaa < 1:2456086/93‑1 (MQ=255) aTCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaag < 2:3492992/93‑1 (MQ=255) aTCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGagaag > 2:3258213/1‑93 (MQ=255) tCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaaga > 1:5783349/1‑93 (MQ=255) tCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGagaaga < 1:4341403/93‑1 (MQ=255) taGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAagag > 1:2371048/2‑93 (MQ=255) cAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAagag > 2:7151787/1‑93 (MQ=255) cAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAagag < 2:931389/93‑1 (MQ=255) aGTATTACCGGTC‑AAAAACCGACCGAAGGGCGGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGt > 1:4488165/1‑93 (MQ=255) aGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGt < 1:7133012/93‑1 (MQ=255) gTATTACCGGTCAAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGt < 1:2356679/93‑1 (MQ=255) gTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTa > 1:2951261/1‑93 (MQ=255) tATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGTAc > 2:417855/1‑93 (MQ=255) ttACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActc > 2:6178623/1‑93 (MQ=255) ttACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActc > 2:2167671/1‑93 (MQ=255) ttACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActc > 2:3550826/1‑93 (MQ=255) ttACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActc > 2:788803/1‑93 (MQ=255) tACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActct < 1:3295045/93‑1 (MQ=255) tACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActct < 2:6944594/93‑1 (MQ=255) tACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTActct < 1:6633269/93‑1 (MQ=255) gTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGc < 1:3963944/93‑1 (MQ=255) gTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGc > 2:4404303/1‑93 (MQ=255) c‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTg < 1:6789636/93‑1 (MQ=255) aaaaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGt < 2:5154714/93‑1 (MQ=255) aaaaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGt > 2:3781737/1‑93 (MQ=255) aaaaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGt > 1:415262/1‑93 (MQ=255) aaaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGtt < 1:535967/93‑1 (MQ=255) aaaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGttt > 1:6528010/1‑93 (MQ=255) aaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTc < 2:6212325/93‑1 (MQ=255) aaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTc < 1:1002085/93‑1 (MQ=255) aaCCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTc > 1:971798/1‑93 (MQ=255) accgaccgAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCt > 2:6696683/1‑93 (MQ=255) gaccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCg > 1:6267174/1‑93 (MQ=255) gaccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCg > 1:1875121/1‑93 (MQ=255) gaccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCg < 2:1350946/93‑1 (MQ=255) gaccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCg > 2:4692852/1‑93 (MQ=255) ccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGGGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCggg > 1:3387036/1‑93 (MQ=255) ccgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCggg > 1:3813706/1‑93 (MQ=255) cgaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGc < 1:5659859/93‑1 (MQ=255) gaAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCt > 1:1437603/1‑93 (MQ=255) aGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTAc > 1:6983686/1‑93 (MQ=255) gggCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACt > 1:1416673/1‑93 (MQ=255) ggCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtg < 1:885055/93‑1 (MQ=255) ggCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtg > 1:5136076/1‑93 (MQ=255) ggCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtg < 1:5586986/93‑1 (MQ=255) gCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtgt < 1:1824484/93‑1 (MQ=255) gCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtgt < 2:1578400/93‑1 (MQ=255) ccGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtgtg < 1:3120357/93‑1 (MQ=255) ccGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtgtg < 2:831341/93‑1 (MQ=255) ccGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACtgtg > 1:3590098/1‑93 (MQ=255) gTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGa > 2:2404488/1‑93 (MQ=255) gTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGa > 2:5547999/1‑93 (MQ=255) gTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGa > 1:6010511/1‑93 (MQ=255) gcgcTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAg < 1:4639272/93‑1 (MQ=255) cgcTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGt < 1:3086261/93‑1 (MQ=255) cTGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTgg > 1:5051485/1‑93 (MQ=255) tGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGa < 2:6678327/93‑1 (MQ=255) tGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGa < 2:6370636/93‑1 (MQ=255) tGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGa < 2:5290669/93‑1 (MQ=255) tGGGGTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGa < 1:179706/93‑1 (MQ=255) ggggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGAt > 2:4357034/1‑93 (MQ=255) gggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATg > 1:6353687/1‑93 (MQ=255) ggTATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATgg < 2:499251/93‑1 (MQ=255) tATTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGc < 2:1158493/93‑1 (MQ=255) aTTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCa < 2:2105212/93‑1 (MQ=255) aTTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCa > 2:198990/1‑93 (MQ=255) aTTTACGCGTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCa < 1:772218/93‑1 (MQ=255) gcgTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAc > 2:3138300/1‑93 (MQ=255) gcgTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAc < 2:4493537/93‑1 (MQ=255) cgTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAcc < 2:3231425/93‑1 (MQ=255) cgTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAcc > 1:7178963/1‑93 (MQ=255) gTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAccc > 1:1924752/1‑93 (MQ=255) gTCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGAccc < 2:2131466/93‑1 (MQ=255) tCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCt < 2:4092077/93‑1 (MQ=255) tCGATTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCt < 1:1311028/93‑1 (MQ=255) aTTCTCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTa < 2:4886898/93‑1 (MQ=255) aTTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTa < 1:6598803/93‑1 (MQ=255) aTTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTa < 1:7459342/93‑1 (MQ=255) aTTATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTa < 2:6544258/93‑1 (MQ=255) ttATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAg > 2:1841229/1‑93 (MQ=255) ttATCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAg < 2:5622412/93‑1 (MQ=255) ttATCAATGAGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAg < 1:7027425/93‑1 (MQ=255) aTCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGa < 1:4724439/93‑1 (MQ=255) tCAATGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGaa > 1:5846279/1‑93 (MQ=255) aaTGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACg > 1:655672/1‑93 (MQ=255) aTGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGa < 1:3678182/93‑1 (MQ=255) aTGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGa < 2:3024591/93‑1 (MQ=255) aTGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGa > 2:4604785/1‑93 (MQ=255) tGAGGTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGAt > 2:2732365/1‑93 (MQ=255) aGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTa < 1:2058086/93‑1 (MQ=255) ggTGCGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACATTTaa < 2:2870970/93‑1 (MQ=255) | TCGCGCCTGGCCTATCAGTATTACCGGTC‑AAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGAGGTACGGAGAATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTAATA > NC_000913/562455‑562637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |