| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 624,133 | T→C | V9A (GTA→GCA) | entC → | isochorismate hydroxymutase 2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 624,133 | 0 | T | C | 86.8% | 711.0 / 84.2 | 287 | V9A (GTA→GCA) | entC | isochorismate hydroxymutase 2 |
| Reads supporting (aligned to +/- strand): ref base T (22/16); new base C (132/117); total (154/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 291 total aligned reads displayed.
GGTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGCTTCG > NC_000913/624043‑624225 | ggTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTAc > 1:1246763/1‑93 (MQ=255)ggTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAc > 1:2266682/1‑93 (MQ=255)ggTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAc > 2:5785206/1‑93 (MQ=255) gTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGcaca < 1:2573540/93‑1 (MQ=255) gTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGcaca < 2:5948587/93‑1 (MQ=255) tAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCAcagc < 2:4405351/93‑1 (MQ=255) cGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGa < 2:3614408/93‑1 (MQ=255) gACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGAc > 1:1373209/1‑93 (MQ=255) gACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGAc > 2:698498/1‑93 (MQ=255) ccGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCa > 1:447070/1‑93 (MQ=255) ccGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCa < 1:59035/93‑1 (MQ=255) ccGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCa > 2:2015322/1‑93 (MQ=255) ccGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCa < 1:5218697/93‑1 (MQ=255) cGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCAt > 2:2375184/1‑93 (MQ=255) gAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATg > 1:1291952/1‑93 (MQ=255) gAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATg > 2:5767637/1‑93 (MQ=255) gAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATg > 1:6441796/1‑93 (MQ=255) aaaaTATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATgg > 1:1449399/1‑93 (MQ=255) aaaaTATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATgg < 2:4468157/93‑1 (MQ=255) aaaaTATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATgg < 1:4834003/93‑1 (MQ=255) aaaTATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGc > 2:4221187/1‑93 (MQ=255) atatAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCaa > 1:513988/1‑93 (MQ=255) atatAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCaa < 2:6611078/93‑1 (MQ=255) atatAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCaa < 1:1852588/93‑1 (MQ=255) tataAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAac > 1:1547093/1‑93 (MQ=255) tataAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAac < 2:2515167/93‑1 (MQ=255) ataAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAaca < 2:382102/93‑1 (MQ=255) ataAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAaca > 1:2367728/1‑93 (MQ=255) taAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAacac < 1:4117561/93‑1 (MQ=255) aaTGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACtt > 1:6322827/1‑93 (MQ=255) aaTGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACtt < 2:2826983/93‑1 (MQ=255) aaTGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACtt < 2:1383887/93‑1 (MQ=255) aTGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTg > 2:755904/1‑93 (MQ=255) aTGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTg > 1:2917276/1‑93 (MQ=255) gATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTgcg > 2:1965490/1‑93 (MQ=255) gATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTgcg < 1:6208252/93‑1 (MQ=255) tAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGcc < 1:6878621/93‑1 (MQ=255) tAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGcc < 1:2162409/93‑1 (MQ=255) aaTCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGccc > 2:4844394/1‑93 (MQ=255) aaTCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGccc > 1:5826543/1‑93 (MQ=255) tCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCaa > 2:2181596/1‑93 (MQ=255) attattAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATc < 1:3362863/93‑1 (MQ=255) attattAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATc > 2:6546510/1‑93 (MQ=255) attattAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATc > 1:6557864/1‑93 (MQ=255) ttattaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCg > 1:1891266/1‑93 (MQ=255) ttattaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCg < 1:3024847/93‑1 (MQ=255) tattaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGc < 1:1508642/93‑1 (MQ=255) attaAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCt > 1:2858074/1‑93 (MQ=255) taAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCttt < 1:5814752/93‑1 (MQ=255) taAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCttt < 2:3403974/93‑1 (MQ=255) aaaGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCtttt < 2:1157260/93‑1 (MQ=255) aaGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCttttt > 1:5444537/1‑93 (MQ=255) aaGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCttttt < 2:7414364/93‑1 (MQ=255) aaGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCttttt > 2:7312554/1‑93 (MQ=255) gCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCt < 1:1038746/93‑1 (MQ=255) gCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCt < 2:3985213/93‑1 (MQ=255) tttATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTa > 2:5049205/1‑93 (MQ=255) tttATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTa < 2:1627694/93‑1 (MQ=255) tttATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTa < 1:2420348/93‑1 (MQ=255) tATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAGCACTTGCGCCCAATCGCTTTTTCTTTATg > 2:1067203/1‑93 (MQ=255) tATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATg > 1:7489728/1‑93 (MQ=255) tATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATg < 1:4274318/93‑1 (MQ=255) tATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATg > 1:3633442/1‑93 (MQ=255) tCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTc < 2:6745124/93‑1 (MQ=255) tCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTc < 2:5696950/93‑1 (MQ=255) cATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCg > 1:5064026/1‑93 (MQ=255) aTTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGc < 1:7242131/93‑1 (MQ=255) aTTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGc < 1:3474025/93‑1 (MQ=255) aTTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGc > 1:4353679/1‑93 (MQ=255) aTTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGc > 1:4505596/1‑93 (MQ=255) ttttGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGcc > 2:609373/1‑93 (MQ=255) ttttGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGcc > 1:3958649/1‑93 (MQ=255) ggaggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCg > 2:3257039/1‑93 (MQ=255) gaggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGc > 2:6282007/1‑93 (MQ=255) aggaTGATATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCa < 2:4693618/93‑1 (MQ=255) gatgatATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGt < 2:5353789/93‑1 (MQ=255) tgatATGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGttt > 1:4220599/1‑93 (MQ=255) gatATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGtttt > 2:5249662/1‑93 (MQ=255) tatGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTac > 1:1667693/1‑93 (MQ=255) tGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTacga > 1:6089665/1‑93 (MQ=255) tGGATACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTacga < 1:4694441/93‑1 (MQ=255) aTACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGt < 1:6695693/93‑1 (MQ=255) aTACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGt < 1:4387636/93‑1 (MQ=255) aTACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGt > 1:7463156/1‑93 (MQ=255) tACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTc > 1:881271/1‑93 (MQ=255) tACGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTc > 1:1628364/1‑93 (MQ=255) aCGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCa < 2:4944040/93‑1 (MQ=255) cGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAg < 1:1424580/93‑1 (MQ=255) cGTCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAg < 2:684349/93‑1 (MQ=255) tCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGa < 1:2997839/93‑1 (MQ=255) tCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGa < 1:3208156/93‑1 (MQ=255) tCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGa < 2:3039749/93‑1 (MQ=255) tCACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGa < 2:152630/93‑1 (MQ=255) cACTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGAt < 1:4575101/93‑1 (MQ=255) aCTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATg < 1:5374390/93‑1 (MQ=255) cTGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGt < 2:260906/93‑1 (MQ=255) tGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTATGACGTCAGGATGtt < 2:7259745/93‑1 (MQ=255) tGGCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGtt < 1:2743059/93‑1 (MQ=255) ggCTGAGGAAGCACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGttt > 1:100494/1‑93 (MQ=255) gAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGcc < 2:5501105/93‑1 (MQ=255) | GGTTAGCGACCGAAAATATAAATGATAATCATTATTAAAGCCTTTATCATTTTGTGGAGGATGATATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGCTTCG > NC_000913/624043‑624225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |