Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 49,119 A→G T451A (ACG→GCG)  kefC → K+ efflux antiporter glutathione‑regulated

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091349,1190AG78.8% 503.1 / 150.3 269T451A (ACG→GCG) kefCK+ efflux antiporter glutathione‑regulated
Reads supporting (aligned to +/- strand):  ref base A (27/30);  new base G (121/91);  total (148/121)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.50e-01

Only 100 of 272 total aligned reads displayed.

GCGGGGTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACA  >  NC_000913/49030‑49211
                                                                                         |                                                                                            
gCGGGGTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCgcgc                                                                                           >  1:4304732/1‑93 (MQ=255)
  ggggTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCgg                                                                                         >  1:6594322/1‑93 (MQ=255)
   gggTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCgga                                                                                        <  2:4810597/93‑1 (MQ=255)
   gggTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCgga                                                                                        >  2:2915626/1‑93 (MQ=255)
   gggTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCgga                                                                                        >  1:5226855/1‑93 (MQ=255)
     gTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCggatg                                                                                      <  1:4908490/93‑1 (MQ=255)
     gTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCggatg                                                                                      <  1:5877719/93‑1 (MQ=255)
      tGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCggatgg                                                                                     >  2:7532515/1‑93 (MQ=255)
      tGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCggatgg                                                                                     >  2:4651681/1‑93 (MQ=255)
      tGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCggatgg                                                                                     >  1:2725628/1‑93 (MQ=255)
        aaaaTGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCggatggat                                                                                   <  1:3471602/93‑1 (MQ=255)
         aaaTGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGAtt                                                                                  <  1:7036394/93‑1 (MQ=255)
         aaaTGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGAtt                                                                                  <  2:4226449/93‑1 (MQ=255)
             ggtggtACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACt                                                                              >  2:1421903/1‑93 (MQ=255)
              gtggtACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTg                                                                             >  1:1795417/1‑93 (MQ=255)
               tggtACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTgg                                                                            >  2:4935601/1‑93 (MQ=255)
                  tACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAAt                                                                         >  1:7466580/1‑93 (MQ=255)
                   aCTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATc                                                                        <  1:1241535/93‑1 (MQ=255)
                   aCTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGAAATc                                                                        >  1:3752310/1‑93 (MQ=255)
                    cTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCt                                                                       <  1:5997105/93‑1 (MQ=255)
                    cTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCt                                                                       >  2:5182063/1‑93 (MQ=255)
                      cGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGc                                                                     >  1:565914/1‑93 (MQ=255)
                       gATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGcc                                                                    >  1:7133367/1‑93 (MQ=255)
                       gATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGcc                                                                    >  2:6051344/1‑93 (MQ=255)
                        aTCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCg                                                                   <  2:5118417/93‑1 (MQ=255)
                          cACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGa                                                                 >  1:3347404/1‑93 (MQ=255)
                           aCGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAg                                                                >  1:5330072/1‑93 (MQ=255)
                           aCGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAg                                                                <  2:1831892/93‑1 (MQ=255)
                             gATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAgcg                                                              <  2:2112851/93‑1 (MQ=255)
                              aTCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAgcgg                                                             >  1:4202954/1‑93 (MQ=255)
                               tCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAgcggc                                                            <  2:983308/93‑1 (MQ=255)
                               tCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAgcggc                                                            <  1:3868620/93‑1 (MQ=255)
                                ccGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAgcggcg                                                           >  1:2502536/1‑93 (MQ=255)
                                 cGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGa                                                          >  1:1593423/1‑93 (MQ=255)
                                  ggACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGaa                                                         >  1:1004935/1‑93 (MQ=255)
                                  ggACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGaa                                                         >  2:7412897/1‑93 (MQ=255)
                                   gACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGaaa                                                        >  2:3937631/1‑93 (MQ=255)
                                   gACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGaaa                                                        >  2:6715569/1‑93 (MQ=255)
                                    aCCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAg                                                       >  2:5053654/1‑93 (MQ=255)
                                     ccATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGc                                                      <  1:5562228/93‑1 (MQ=255)
                                     ccATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGc                                                      <  1:190511/93‑1 (MQ=255)
                                     ccATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGc                                                      <  2:3817509/93‑1 (MQ=255)
                                      cATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCg                                                     >  1:5094860/1‑93 (MQ=255)
                                       atatCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCgg                                                    >  1:2328175/1‑93 (MQ=255)
                                        tatCGGAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGa                                                   >  1:4699549/1‑93 (MQ=255)
                                        tatCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGa                                                   >  2:7159028/1‑93 (MQ=255)
                                          tCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAg                                                 >  1:6195724/1‑93 (MQ=255)
                                          tCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAg                                                 >  2:1635480/1‑93 (MQ=255)
                                            gAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAgcg                                               >  2:7080251/1‑91 (MQ=255)
                                            gAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTg                                               >  2:2490660/1‑93 (MQ=255)
                                                ccTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGa                                           >  1:623532/1‑93 (MQ=255)
                                                ccTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGa                                           <  2:336142/93‑1 (MQ=255)
                                                ccTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGa                                           >  2:4553936/1‑93 (MQ=255)
                                                ccTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGa                                           >  1:3935930/1‑93 (MQ=255)
                                                 cTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGAt                                          >  2:6442075/1‑93 (MQ=255)
                                                    gCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTaa                                       <  1:2309232/93‑1 (MQ=255)
                                                    gCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTaa                                       <  2:3208796/93‑1 (MQ=255)
                                                     cGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAAc                                      <  1:476675/93‑1 (MQ=255)
                                                      gTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACg                                     >  1:578075/1‑93 (MQ=255)
                                                          aTTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCAt                                 <  2:4383643/93‑1 (MQ=255)
                                                           tttGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATc                                >  1:5426910/1‑93 (MQ=255)
                                                           tttGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATc                                <  1:6667678/93‑1 (MQ=255)
                                                             tGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcga                              <  2:3573501/93‑1 (MQ=255)
                                                             tGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcga                              <  2:3979082/93‑1 (MQ=255)
                                                             tGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcga                              <  2:1284967/93‑1 (MQ=255)
                                                              ggTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcgac                             >  1:4549578/1‑93 (MQ=255)
                                                               gTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcgacg                            <  1:4879064/93‑1 (MQ=255)
                                                                tATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcgacga                           >  2:3132760/1‑93 (MQ=255)
                                                                tATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcgacga                           >  2:5710996/1‑93 (MQ=255)
                                                                 aTGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGAt                          >  1:6422555/1‑93 (MQ=255)
                                                                  tGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATc                         <  2:5968783/93‑1 (MQ=255)
                                                                   gAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATcc                        >  2:632670/1‑93 (MQ=255)
                                                                   gAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATcc                        <  2:5391636/93‑1 (MQ=255)
                                                                   gAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATcc                        <  2:5563515/93‑1 (MQ=255)
                                                                   gAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATcc                        >  1:2948028/1‑93 (MQ=255)
                                                                     aaGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGc                      <  2:5278530/93‑1 (MQ=255)
                                                                     aaGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGc                      >  1:1999966/1‑93 (MQ=255)
                                                                      aGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCa                     >  2:2279898/1‑93 (MQ=255)
                                                                        tgtTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCaaa                   >  1:635490/1‑93 (MQ=255)
                                                                        tgtTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCaaa                   >  1:1442742/1‑93 (MQ=255)
                                                                         gtTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaac                  >  1:1270025/1‑93 (MQ=255)
                                                                         gtTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaac                  >  1:5788920/1‑93 (MQ=255)
                                                                         gtTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaac                  <  1:2213206/93‑1 (MQ=255)
                                                                         gtTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaac                  >  1:6927016/1‑93 (MQ=255)
                                                                          ttttATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaacc                 >  1:593815/1‑93 (MQ=255)
                                                                          ttttATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaacc                 <  1:4440255/93‑1 (MQ=255)
                                                                              aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc             >  2:1583602/1‑93 (MQ=255)
                                                                              aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc             <  1:4138107/93‑1 (MQ=255)
                                                                              aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc             <  2:7018889/93‑1 (MQ=255)
                                                                              aTGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAaaccaacc             >  1:894641/1‑93 (MQ=255)
                                                                               tGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCt            >  2:1988227/1‑93 (MQ=255)
                                                                               tGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCt            >  1:4583531/1‑93 (MQ=255)
                                                                                  cGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCa         <  2:6226403/93‑1 (MQ=255)
                                                                                  cGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCa         <  2:1940241/93‑1 (MQ=255)
                                                                                    aTGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAAc       <  1:1417070/93‑1 (MQ=255)
                                                                                     tGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACt      >  2:6857750/1‑93 (MQ=255)
                                                                                     tGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACt      <  1:5009480/93‑1 (MQ=255)
                                                                                     tGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACt      <  1:2387488/93‑1 (MQ=255)
                                                                                        cACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGAc   >  1:3119395/1‑93 (MQ=255)
                                                                                         aCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACa  <  2:7284226/93‑1 (MQ=255)
                                                                                         |                                                                                            
GCGGGGTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACA  >  NC_000913/49030‑49211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: