Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 705,360 C→T I15I (ATC→ATT glnS → glutamine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913705,3600CT86.7% 716.5 / 69.4 248I15I (ATC→ATTglnSglutamine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base C (22/11);  new base T (118/97);  total (140/108)
Fisher's exact test for biased strand distribution p-value = 2.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.78e-01

Only 100 of 256 total aligned reads displayed.

AAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTGGCCATGCG  >  NC_000913/705270‑705450
                                                                                          |                                                                                          
aaGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGattat                                                                                          <  2:5701190/93‑1 (MQ=255)
 aGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGattatc                                                                                         <  1:5992192/93‑1 (MQ=255)
   aTCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGa                                                                                       <  1:2967316/93‑1 (MQ=255)
    tCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGAt                                                                                      >  2:7468310/1‑93 (MQ=255)
    tCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGAt                                                                                      <  2:4874709/93‑1 (MQ=255)
      aTACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGa                                                                                    >  2:3557444/1‑93 (MQ=255)
      aTACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGa                                                                                    >  2:7229617/1‑93 (MQ=255)
      aTACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGa                                                                                    >  1:2102700/1‑93 (MQ=255)
       tACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGaa                                                                                   <  2:4406408/93‑1 (MQ=255)
         cGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGa                                                                                 <  1:6279065/93‑1 (MQ=255)
         cGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGa                                                                                 <  1:3819954/93‑1 (MQ=255)
         cGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGa                                                                                 <  2:7435470/93‑1 (MQ=255)
         cGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGa                                                                                 >  1:5160576/1‑93 (MQ=255)
          gCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGGAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGAt                                                                                <  1:5628309/93‑1 (MQ=255)
          gCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGAt                                                                                >  2:2732590/1‑93 (MQ=255)
          gCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGAt                                                                                >  1:1208061/1‑93 (MQ=255)
          gCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGAt                                                                                <  1:745538/93‑1 (MQ=255)
          gCCGTTATACGTTGTTTACGCTTTGAGGAATCCACAATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGAt                                                                                <  2:5887574/93‑1 (MQ=255)
           ccGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATc                                                                               >  1:170021/1‑93 (MQ=255)
             gTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTg                                                                             <  1:2417207/93‑1 (MQ=255)
             gTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTg                                                                             >  1:5239619/1‑93 (MQ=255)
                ataCGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTggnn                                                                          >  2:3589093/1‑91 (MQ=255)
                 taCGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCa                                                                         >  1:5673831/1‑93 (MQ=255)
                 taCGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCa                                                                         >  1:111959/1‑93 (MQ=255)
                 taCGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCa                                                                         >  1:1635917/1‑93 (MQ=255)
                   cGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGt                                                                       <  2:3768544/93‑1 (MQ=255)
                   cGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGt                                                                       <  2:3830878/93‑1 (MQ=255)
                    gttgttTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTg                                                                      <  2:2572572/93‑1 (MQ=255)
                    gttgttTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTg                                                                      <  1:5506325/93‑1 (MQ=255)
                     ttgttTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTgg                                                                     <  1:958981/93‑1 (MQ=255)
                       gttTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTa                                                                   <  2:1390746/93‑1 (MQ=255)
                        tttACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTaa                                                                  >  1:3692350/1‑93 (MQ=255)
                          tACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGc                                                                >  2:1030416/1‑93 (MQ=255)
                          tACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGc                                                                >  2:1446077/1‑93 (MQ=255)
                          tACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGc                                                                >  1:6688211/1‑93 (MQ=255)
                           aCGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGca                                                               <  1:1960649/93‑1 (MQ=255)
                           aCGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGca                                                               >  1:4244857/1‑93 (MQ=255)
                           aCGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGca                                                               <  2:6225672/93‑1 (MQ=255)
                           aCGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGca                                                               >  1:1376705/1‑93 (MQ=255)
                              cTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCacac                                                            <  2:2361517/93‑1 (MQ=255)
                               tttGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCAcacc                                                           >  2:329998/1‑93 (MQ=255)
                                tggAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCAcacca                                                          <  2:1987739/91‑1 (MQ=255)
                                   aGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAg                                                       <  2:5534407/93‑1 (MQ=255)
                                   aGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAg                                                       >  2:913530/1‑93 (MQ=255)
                                    ggAATCCACGATGAGTGAGGCAGAAGCGCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGt                                                      >  2:6426833/1‑93 (MQ=255)
                                     gAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTa                                                     <  1:1898168/93‑1 (MQ=255)
                                      aaTCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTac                                                    >  2:4096763/1‑93 (MQ=255)
                                      aaTCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTac                                                    <  1:1541089/93‑1 (MQ=255)
                                       aTCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTaca                                                   >  1:4472062/1‑93 (MQ=255)
                                        tCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTacac                                                  >  1:6365147/1‑93 (MQ=255)
                                        tCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTacac                                                  >  2:2181211/1‑93 (MQ=255)
                                        tCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTacac                                                  <  1:4741413/93‑1 (MQ=255)
                                         ccACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTacaca                                                 >  2:5485208/1‑93 (MQ=255)
                                         ccACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTacaca                                                 <  2:1544146/93‑1 (MQ=255)
                                         ccACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTacaca                                                 <  1:6820497/93‑1 (MQ=255)
                                         ccACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTacaca                                                 >  2:5350700/1‑93 (MQ=255)
                                          cACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTacacac                                                >  1:4031745/1‑93 (MQ=255)
                                           aCGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACAcc                                               >  1:1008497/1‑93 (MQ=255)
                                           aCGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACAcc                                               <  2:6332805/93‑1 (MQ=255)
                                           aCGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACAcc                                               >  2:5004971/1‑93 (MQ=255)
                                            cGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACAccc                                              >  2:1293579/1‑93 (MQ=255)
                                            cGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACAccc                                              >  2:2423480/1‑93 (MQ=255)
                                             gATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCg                                             <  1:3971098/93‑1 (MQ=255)
                                               tgagtgagGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGtt                                           >  2:4316346/1‑93 (MQ=255)
                                                gagtgagGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGttt                                          <  1:1476979/93‑1 (MQ=255)
                                                 agtgagGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTc                                         >  1:4547492/1‑93 (MQ=255)
                                                  gtgagGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACGCCCGTTTcc                                        <  2:463119/93‑1 (MQ=255)
                                                  gtgagGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTcc                                        <  2:3880362/93‑1 (MQ=255)
                                                  gtgagGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTcc                                        <  2:7074670/93‑1 (MQ=255)
                                                         aGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGa                                 >  1:3518347/1‑93 (MQ=255)
                                                         aGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGa                                 >  2:1094332/1‑93 (MQ=255)
                                                         aGAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGa                                 >  2:6056116/1‑93 (MQ=255)
                                                         aGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGa                                 >  2:7014806/1‑93 (MQ=255)
                                                          gAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAg                                >  1:6876183/1‑93 (MQ=255)
                                                          gAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAg                                >  2:6888641/1‑93 (MQ=255)
                                                          gAAGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAg                                >  2:4068252/1‑93 (MQ=255)
                                                           aaGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGc                               <  2:6779920/93‑1 (MQ=255)
                                                            aGCCCGCCCGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGcc                              >  1:5887713/1‑93 (MQ=255)
                                                             gcccgcccGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCg                             >  2:539651/1‑93 (MQ=255)
                                                             gcccgcccGACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCg                             >  1:6187439/1‑93 (MQ=255)
                                                                 gcccgACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATg                         <  2:4605371/93‑1 (MQ=255)
                                                                  cccgACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATgg                        >  1:2471998/1‑93 (MQ=255)
                                                                   ccgACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGc                       >  1:319396/1‑93 (MQ=255)
                                                                    cgACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCt                      <  1:5052812/93‑1 (MQ=255)
                                                                    cgACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCt                      <  1:736502/93‑1 (MQ=255)
                                                                     gACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTa                     <  1:2941213/93‑1 (MQ=255)
                                                                     gACTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTa                     <  1:3913887/93‑1 (MQ=255)
                                                                      aCTAACTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTAt                    >  2:6640996/1‑93 (MQ=255)
                                                                           cTTTATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCGCAGTACACGCCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCa               <  1:3298861/93‑1 (MQ=255)
                                                                            tttATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCat              >  1:8903/1‑93 (MQ=255)
                                                                            tttATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCat              <  1:4712684/93‑1 (MQ=255)
                                                                             ttATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCata             <  2:525920/93‑1 (MQ=255)
                                                                              tATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCatat            <  1:3179645/93‑1 (MQ=255)
                                                                              tATCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCatat            <  2:658165/93‑1 (MQ=255)
                                                                               aTCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATAtt           <  1:377670/93‑1 (MQ=255)
                                                                                tCCGTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTg          <  1:3397489/93‑1 (MQ=255)
                                                                                  cGTCAGATTATCGATGAAGATCTGGCCAGTGTTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTGGc        <  2:4527512/93‑1 (MQ=255)
                                                                                   gTCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTGGcc       >  1:7035596/1‑93 (MQ=255)
                                                                                    tCAGATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTGGCCa      <  2:1635929/93‑1 (MQ=255)
                                                                                       gATTATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTGGCCATGc   <  1:6993322/93‑1 (MQ=255)
                                                                                          |                                                                                          
AAGATCATACGCCGTTATACGTTGTTTACGCTTTGAGGAATCCACGATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTGGCCATGCG  >  NC_000913/705270‑705450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: