Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 765,778 C→T A191V (GCC→GTC)  hrsA → PTS system fructose specific IIABC component

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913765,7780CT87.3% 786.0 / 65.4 268A191V (GCC→GTC) hrsAPTS system fructose specific IIABC component
Reads supporting (aligned to +/- strand):  ref base C (15/19);  new base T (112/122);  total (127/141)
Fisher's exact test for biased strand distribution p-value = 7.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.13e-01

Only 100 of 268 total aligned reads displayed.

CTGATGAGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGAAAAA  >  NC_000913/765688‑765869
                                                                                          |                                                                                           
 tgatgaGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTg                                                                                          >  2:6365512/1‑93 (MQ=255)
 tgatgaGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTg                                                                                          >  1:4973294/1‑93 (MQ=255)
  gatgaGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGt                                                                                         >  1:7057963/1‑93 (MQ=255)
   atgaGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTc                                                                                        >  2:7463416/1‑93 (MQ=255)
   atgaGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTc                                                                                        <  1:4655324/93‑1 (MQ=255)
    tgaGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTcc                                                                                       <  2:5300515/93‑1 (MQ=255)
     gaGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCcg                                                                                      <  1:6627977/93‑1 (MQ=255)
       gTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCcggc                                                                                    <  2:1565260/93‑1 (MQ=255)
       gTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCcggc                                                                                    <  2:4393626/93‑1 (MQ=255)
       gTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCcggc                                                                                    >  1:6826956/1‑93 (MQ=255)
         tGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCcggcgg                                                                                  <  2:4070336/93‑1 (MQ=255)
         tGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCcggcgg                                                                                  <  2:6341438/93‑1 (MQ=255)
         tGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCcggcgg                                                                                  >  2:7243842/1‑93 (MQ=255)
         tGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCcggcgg                                                                                  <  2:447209/93‑1 (MQ=255)
          gCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCggg                                                                                 <  2:6016187/93‑1 (MQ=255)
           ctctCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGt                                                                                >  2:5182035/1‑93 (MQ=255)
             ctcGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTAt                                                                              <  2:2468342/93‑1 (MQ=255)
             ctcGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTAt                                                                              <  1:4844598/93‑1 (MQ=255)
             ctcGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTAt                                                                              <  2:1464957/93‑1 (MQ=255)
              tcGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTAtt                                                                             >  1:7481732/1‑93 (MQ=255)
               cGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTg                                                                            <  1:3978409/93‑1 (MQ=255)
                   gcTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTca                                                                        >  2:3801712/1‑93 (MQ=255)
                    cTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTcac                                                                       >  2:1794049/1‑93 (MQ=255)
                      ggATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCacac                                                                     >  2:6955425/1‑93 (MQ=255)
                        aTGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCt                                                                   >  2:5120146/1‑93 (MQ=255)
                           aCAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCtata                                                                <  2:1673149/93‑1 (MQ=255)
                            cAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCCACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTatat                                                               <  1:7374958/93‑1 (MQ=255)
                            cAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTatat                                                               >  1:6066781/1‑93 (MQ=255)
                            cAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTatat                                                               <  1:3229537/93‑1 (MQ=255)
                               gggAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGc                                                            >  1:6234701/1‑93 (MQ=255)
                                ggAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCt                                                           >  2:7385671/1‑93 (MQ=255)
                                   ggCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCg                                                        <  2:6843459/93‑1 (MQ=255)
                                   ggCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCg                                                        >  1:3079233/1‑93 (MQ=255)
                                   ggCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCg                                                        >  1:6680020/1‑93 (MQ=255)
                                    gCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCgg                                                       <  2:3557704/93‑1 (MQ=255)
                                      aCGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGaa                                                     >  1:1872509/1‑93 (MQ=255)
                                      aCGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGaa                                                     >  1:1978849/1‑93 (MQ=255)
                                       cGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAat                                                    <  1:5103531/93‑1 (MQ=255)
                                       cGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAat                                                    >  1:1034434/1‑93 (MQ=255)
                                        gCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAata                                                   <  2:352333/93‑1 (MQ=255)
                                         cAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAatat                                                  <  1:2762664/93‑1 (MQ=255)
                                         cAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAatat                                                  <  2:3501740/93‑1 (MQ=255)
                                          aaCCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATc                                                 >  1:2561804/1‑93 (MQ=255)
                                          aaCCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATc                                                 <  1:428652/93‑1 (MQ=255)
                                          aaCCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATc                                                 >  2:5768594/1‑93 (MQ=255)
                                          aaCCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATc                                                 >  1:5987000/1‑93 (MQ=255)
                                           aCCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCt                                                <  2:2094972/93‑1 (MQ=255)
                                           aCCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCt                                                >  1:1202668/1‑93 (MQ=255)
                                           aCCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCt                                                <  1:2429629/93‑1 (MQ=255)
                                            ccTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTg                                               >  2:2865573/1‑93 (MQ=255)
                                             cTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTgg                                              <  2:5844732/93‑1 (MQ=255)
                                             cTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTgg                                              <  2:5753624/93‑1 (MQ=255)
                                              ttCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGa                                             <  2:1115284/93‑1 (MQ=255)
                                              ttCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGa                                             <  1:1507284/93‑1 (MQ=255)
                                              ttCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGa                                             >  2:2245176/1‑93 (MQ=255)
                                                cTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGaaa                                           <  1:2983608/93‑1 (MQ=255)
                                                cTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGaaa                                           <  2:5997404/93‑1 (MQ=255)
                                                   ccTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAg                                        >  2:6263917/1‑93 (MQ=255)
                                                     tctTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGcc                                      <  2:3220821/93‑1 (MQ=255)
                                                      ctTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCg                                     <  1:389781/93‑1 (MQ=255)
                                                      ctTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCg                                     >  2:3013594/1‑93 (MQ=255)
                                                      ctTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCg                                     <  1:6364121/93‑1 (MQ=255)
                                                        ttttCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGa                                   <  2:1911139/93‑1 (MQ=255)
                                                        ttttCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGa                                   <  2:3108619/93‑1 (MQ=255)
                                                        ttttCCAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGa                                   <  2:1050645/93‑1 (MQ=255)
                                                            ccAACGCGCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCa                               >  2:6164929/1‑93 (MQ=255)
                                                              aaCGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCaaa                             <  1:7421012/93‑1 (MQ=255)
                                                               aCGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAAc                            <  1:3323302/93‑1 (MQ=255)
                                                                cgcgCCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACt                           <  1:2183479/93‑1 (MQ=255)
                                                                 gcgcCAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTc                          <  1:1736981/93‑1 (MQ=255)
                                                                    ccAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGGATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGc                       >  1:6560286/1‑93 (MQ=255)
                                                                     cAACTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCg                      <  1:5946581/93‑1 (MQ=255)
                                                                       aCTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTa                    >  2:5481699/1‑93 (MQ=255)
                                                                       aCTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTa                    >  1:1610981/1‑93 (MQ=255)
                                                                        cTATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTaa                   <  1:3678912/93‑1 (MQ=255)
                                                                         tATCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTaaa                  >  2:7354045/1‑93 (MQ=255)
                                                                          aTCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAAt                 <  2:4257133/93‑1 (MQ=255)
                                                                           tCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATg                >  2:3991385/1‑93 (MQ=255)
                                                                           tCGTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATg                >  1:7166070/1‑93 (MQ=255)
                                                                             gTCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGtt              >  2:4831147/1‑93 (MQ=255)
                                                                              tCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCTGGCGCAAACTCGGCGTAAATGttt             >  1:6980434/1‑93 (MQ=255)
                                                                              tCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGttt             <  1:2879915/93‑1 (MQ=255)
                                                                              tCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGttt             >  2:6537411/1‑93 (MQ=255)
                                                                              tCTGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGttt             >  2:856942/1‑93 (MQ=255)
                                                                              tCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGttt             <  2:5308771/93‑1 (MQ=255)
                                                                              tCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGttt             >  2:3360089/1‑93 (MQ=255)
                                                                                tGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTAc           <  1:2631066/93‑1 (MQ=255)
                                                                                tGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTAc           <  1:5727867/93‑1 (MQ=255)
                                                                                tGCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTAc           <  2:320061/93‑1 (MQ=255)
                                                                                 gCGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCAGCGTAAATGTTTACg          >  1:601523/1‑93 (MQ=255)
                                                                                  cGTAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGt         <  1:5419652/93‑1 (MQ=255)
                                                                                   gTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGtt        >  2:130479/1‑93 (MQ=255)
                                                                                    tAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTg       >  1:4604908/1‑93 (MQ=255)
                                                                                    tAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTg       <  2:2796482/93‑1 (MQ=255)
                                                                                    tAACGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTg       >  2:775934/1‑93 (MQ=255)
                                                                                    tAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTg       >  2:4585159/1‑93 (MQ=255)
                                                                                     aaCGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGa      >  2:2539442/1‑93 (MQ=255)
                                                                                      aCGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGaa     >  1:3872402/1‑93 (MQ=255)
                                                                                      aCGGTCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGaa     >  1:4111797/1‑93 (MQ=255)
                                                                                         gCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGaaaaa  <  2:6707727/93‑1 (MQ=255)
                                                                                          |                                                                                           
CTGATGAGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGAAAAA  >  NC_000913/765688‑765869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: