Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 49,165 T→C V466A (GTG→GCG)  kefC → K+ efflux antiporter glutathione‑regulated

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091349,1650TC85.5% 641.2 / 93.8 276V466A (GTG→GCG) kefCK+ efflux antiporter glutathione‑regulated
Reads supporting (aligned to +/- strand):  ref base T (17/23);  new base C (109/127);  total (126/150)
Fisher's exact test for biased strand distribution p-value = 7.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.42e-01

Only 100 of 276 total aligned reads displayed.

GAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTGCCCGC  >  NC_000913/49074‑49256
                                                                                           |                                                                                           
gAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTg                                                                                            >  2:2490660/1‑93 (MQ=255)
  aaCCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCt                                                                                          <  2:5322926/93‑1 (MQ=255)
  aaCCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCt                                                                                          <  2:4916309/93‑1 (MQ=255)
    ccTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGa                                                                                        >  1:623532/1‑93 (MQ=255)
      ttGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGAtt                                                                                      <  1:3029349/93‑1 (MQ=255)
      ttGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGAtt                                                                                      >  2:1931539/1‑93 (MQ=255)
        gCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTaa                                                                                    <  1:2309232/93‑1 (MQ=255)
         cGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAAc                                                                                   <  1:476675/93‑1 (MQ=255)
              aTTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCAt                                                                              >  1:711027/1‑93 (MQ=255)
              aTTTGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCAt                                                                              <  2:6013594/93‑1 (MQ=255)
               tttGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATc                                                                             >  1:4634175/1‑93 (MQ=255)
                 tGGTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcga                                                                           <  2:12315/93‑1 (MQ=255)
                  ggTATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcgac                                                                          >  1:4549578/1‑93 (MQ=255)
                    tATGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATcgacga                                                                        >  2:5710996/1‑93 (MQ=255)
                     aTGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGAt                                                                       >  1:6422555/1‑93 (MQ=255)
                      tGAAAGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATc                                                                      <  2:1151730/93‑1 (MQ=255)
                        aaaGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCg                                                                    >  2:6113860/1‑93 (MQ=255)
                         aaGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGc                                                                   >  1:1999966/1‑93 (MQ=255)
                          aGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCa                                                                  >  2:2279898/1‑93 (MQ=255)
                          aGTGTTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCa                                                                  >  1:4804244/1‑93 (MQ=255)
                             gtTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaac                                                               >  1:5788920/1‑93 (MQ=255)
                             gtTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaac                                                               >  2:1943700/1‑93 (MQ=255)
                             gtTTTATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaac                                                               >  1:6927016/1‑93 (MQ=255)
                              ttttATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaacc                                                              >  1:593815/1‑93 (MQ=255)
                               tttATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAaacca                                                             >  1:5887082/1‑93 (MQ=255)
                                 tATGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaac                                                           <  2:3191975/93‑1 (MQ=255)
                                  aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc                                                          <  1:4138107/93‑1 (MQ=255)
                                  aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc                                                          <  1:3869452/93‑1 (MQ=255)
                                  aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc                                                          <  1:6895121/93‑1 (MQ=255)
                                  aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc                                                          <  2:7018889/93‑1 (MQ=255)
                                  aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc                                                          >  2:1583602/1‑93 (MQ=255)
                                  aTGGCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc                                                          >  1:5744554/1‑93 (MQ=255)
                                  aTGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAaaccaacc                                                          >  1:1009444/1‑93 (MQ=255)
                                    ggCGATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTg                                                        <  2:5122240/93‑1 (MQ=255)
                                       gATGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCaa                                                     >  2:5603168/1‑93 (MQ=255)
                                        aTGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAAc                                                    <  1:6022964/93‑1 (MQ=255)
                                        aTGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCacc                                                    >  2:4558035/1‑91 (MQ=255)
                                         tGCCGCGCGGATGGATTTACTGGAATCTGCTGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACt                                                   <  2:7435328/93‑1 (MQ=255)
                                         tGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACt                                                   >  1:1418251/1‑93 (MQ=255)
                                         tGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACt                                                   >  2:6857750/1‑93 (MQ=255)
                                         tGCCGCGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACt                                                   <  2:5527917/93‑1 (MQ=255)
                                         tGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACt                                                   <  1:2387488/93‑1 (MQ=255)
                                          gCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTg                                                  <  2:128867/93‑1 (MQ=255)
                                           ccgcgcgGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGa                                                 >  2:3304160/4‑93 (MQ=255)
                                           ccgcgcgGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGa                                                 >  1:1442849/4‑93 (MQ=255)
                                            cgcgcgGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGAc                                                <  2:6583441/91‑1 (MQ=255)
                                            cACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGAc                                                <  2:453882/93‑1 (MQ=255)
                                               gcgGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCTGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACaga                                             >  1:6220884/1‑93 (MQ=255)
                                               gcgGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACaga                                             <  2:3804389/93‑1 (MQ=255)
                                                 ggatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAgaga                                           >  1:5583288/1‑93 (MQ=255)
                                                 ggatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAgaga                                           <  1:552105/93‑1 (MQ=255)
                                                  gatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGAt                                          <  2:2328175/93‑1 (MQ=255)
                                                  gatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGAt                                          <  2:3710445/93‑1 (MQ=255)
                                                  gatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGAt                                          >  2:2845859/1‑93 (MQ=255)
                                                  gatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGAt                                          <  2:336276/93‑1 (MQ=255)
                                                  gatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGAt                                          >  2:894923/1‑93 (MQ=255)
                                                  gatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGAt                                          <  1:3291580/93‑1 (MQ=255)
                                                  gatggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGAt                                          >  1:5615713/1‑93 (MQ=255)
                                                   atggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATg                                         >  1:5336048/1‑93 (MQ=255)
                                                   atggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATg                                         >  2:625578/1‑93 (MQ=255)
                                                     ggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGt                                       <  1:400632/93‑1 (MQ=255)
                                                     ggatTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGt                                       <  1:1629518/93‑1 (MQ=255)
                                                       atTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGa                                     >  2:5838934/1‑93 (MQ=255)
                                                        tttACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGaa                                    >  2:2041875/1‑93 (MQ=255)
                                                         ttACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGaaa                                   >  2:373222/1‑93 (MQ=255)
                                                            cTGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGaa                                <  2:435402/93‑1 (MQ=255)
                                                             tGGAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAAc                               >  1:5301858/1‑93 (MQ=255)
                                                              ggAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACa                              >  2:2972210/1‑93 (MQ=255)
                                                              ggAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACa                              <  2:2183335/93‑1 (MQ=255)
                                                              ggAATCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACa                              >  1:2716947/1‑93 (MQ=255)
                                                                aaTCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACAtt                            >  2:258922/1‑93 (MQ=255)
                                                                aaTCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACAtt                            <  2:1926088/93‑1 (MQ=255)
                                                                 aTCTGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACAttt                           >  2:6371150/1‑93 (MQ=255)
                                                                    tGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTccc                        >  1:1841270/1‑93 (MQ=255)
                                                                    tGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTccc                        >  1:134454/1‑93 (MQ=255)
                                                                    tGCCGGAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTccc                        <  1:1125279/93‑1 (MQ=255)
                                                                        ggAGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCAt                    <  2:4815022/93‑1 (MQ=255)
                                                                          aGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCAttt                  <  1:2220073/93‑1 (MQ=255)
                                                                          aGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCAttt                  >  1:2532706/1‑93 (MQ=255)
                                                                          aGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCAttt                  <  2:5223775/93‑1 (MQ=255)
                                                                          aGCGGCGAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCAttt                  >  1:3783366/1‑93 (MQ=255)
                                                                            cggcgAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGCTGGTGAAAGAACATTTCCCGCATTTGc                <  1:5638118/93‑1 (MQ=255)
                                                                            cggcgAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGc                <  2:2547926/93‑1 (MQ=255)
                                                                               cgAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGa             <  2:7489354/93‑1 (MQ=255)
                                                                                gAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAGCCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTTCCGCATTTGCAGat            <  2:7165014/93‑1 (MQ=255)
                                                                                gAAAGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGat            <  2:6609790/93‑1 (MQ=255)
                                                                                 aaaGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGatt           <  2:139697/93‑1 (MQ=255)
                                                                                 aaaGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGatt           <  1:5850343/93‑1 (MQ=255)
                                                                                  aaGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGatta          <  1:1922572/93‑1 (MQ=255)
                                                                                  aaGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGatta          >  2:7275847/1‑93 (MQ=255)
                                                                                  aaGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGatta          >  1:7293137/1‑93 (MQ=255)
                                                                                  aaGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGatta          <  1:5202537/93‑1 (MQ=255)
                                                                                   aGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGattat         >  1:4457733/1‑93 (MQ=255)
                                                                                   aGCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGattat         <  2:6463094/93‑1 (MQ=255)
                                                                                    gCGGAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGattatt        <  2:3477012/93‑1 (MQ=255)
                                                                                     cGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTg       <  1:4302571/93‑1 (MQ=255)
                                                                                     cGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTg       <  1:6684634/93‑1 (MQ=255)
                                                                                       gAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTgcc     >  2:4281661/1‑93 (MQ=255)
                                                                                       gAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTgcc     <  1:4941288/93‑1 (MQ=255)
                                                                                       gAAGCGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTgcc     <  1:2772947/93‑1 (MQ=255)
                                                                                           |                                                                                           
GAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTGCCCGC  >  NC_000913/49074‑49256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: