| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 883,244 | A→G | I117V (ATA→GTA) | cmr → | proton motive force efflux pump |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 883,244 | 0 | A | G | 85.9% | 664.4 / 98.6 | 277 | I117V (ATA→GTA) | cmr | proton motive force efflux pump |
| Reads supporting (aligned to +/- strand): ref base A (18/21); new base G (122/116); total (140/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 279 total aligned reads displayed.
TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCG > NC_000913/883152‑883336 | tGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCa > 2:5331901/1‑93 (MQ=255) gggAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAg > 2:1466476/1‑93 (MQ=255) ggAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGc < 2:5714536/93‑1 (MQ=255) ggAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGc < 2:1963881/93‑1 (MQ=255) gtggtgtggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCctc < 2:2539494/93‑1 (MQ=255) ggtgtggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTg < 2:2267394/93‑1 (MQ=255) ggtgtggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTg > 2:632767/1‑93 (MQ=255) gtgtggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGt < 2:5260453/93‑1 (MQ=255) gtgtggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGt > 1:3390935/1‑93 (MQ=255) tggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTc < 1:7055699/93‑1 (MQ=255) ggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCa > 1:7377784/1‑93 (MQ=255) gtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCAt > 1:6917483/1‑93 (MQ=255) tttATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCAtt > 1:4211481/1‑93 (MQ=255) tttATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCAtt < 1:6482218/93‑1 (MQ=255) tttATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCAtt < 1:5082818/93‑1 (MQ=255) tATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTgg < 1:1489086/93‑1 (MQ=255) tATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTgg < 1:3264569/93‑1 (MQ=255) gTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCt > 2:7402219/1‑93 (MQ=255) tCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCtg > 1:6607443/1‑93 (MQ=255) cACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCtgt > 2:2458314/1‑93 (MQ=255) aCCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCtgtg < 2:5014465/93‑1 (MQ=255) aCCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCtgtg < 2:6660696/93‑1 (MQ=255) ccTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTgg < 2:6691089/93‑1 (MQ=255) cTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTggg > 2:640203/1‑93 (MQ=255) cTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTggg > 2:1370600/1‑93 (MQ=255) tGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGa < 1:6728768/93‑1 (MQ=255) tGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGa < 2:431237/93‑1 (MQ=255) tCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATa < 1:3441046/93‑1 (MQ=255) cTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATAc < 1:3827116/93‑1 (MQ=255) tGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATAcg > 2:3956482/1‑93 (MQ=255) tGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATAcg > 1:3158279/1‑93 (MQ=255) ggCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATAcgc > 2:651537/1‑93 (MQ=255) ggCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATAcgc > 1:6840325/1‑93 (MQ=255) aaTATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATAcgccgc > 1:190513/1‑93 (MQ=255) aaTATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATAcgccgc < 2:1615098/93‑1 (MQ=255) atatTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCa > 1:2187102/1‑93 (MQ=255) tatTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCaa > 2:3754334/1‑93 (MQ=255) atTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAAt > 2:238420/1‑93 (MQ=255) atTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAAt > 2:868332/1‑93 (MQ=255) ttGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAAtt > 2:5550362/1‑93 (MQ=255) gCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCa < 2:2069720/93‑1 (MQ=255) gCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCa < 2:1811674/93‑1 (MQ=255) cTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAg < 2:7194239/93‑1 (MQ=255) tGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAgg > 1:4683774/1‑93 (MQ=255) ggCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGa < 1:6364682/93‑1 (MQ=255) ggCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGa < 2:6186983/93‑1 (MQ=255) gcgcAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGaa > 2:7132925/1‑93 (MQ=255) gcgcAAAACATGGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGaa < 1:2041818/93‑1 (MQ=255) cgcAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAAt < 2:3472626/93‑1 (MQ=255) cgcAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAAt < 1:1438808/93‑1 (MQ=255) cAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATcc > 2:319734/1‑93 (MQ=255) aaaaCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCt > 2:3245765/1‑93 (MQ=255) aaaaCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCt < 2:1103085/93‑1 (MQ=255) aaaaCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCt < 2:4636416/93‑1 (MQ=255) aCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCg > 1:6239212/1‑93 (MQ=255) aTTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGaa < 1:4577854/93‑1 (MQ=255) aTTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGaa < 2:5985873/93‑1 (MQ=255) ttGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAag > 2:3121144/1‑93 (MQ=255) ttGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAag < 1:5916384/93‑1 (MQ=255) tGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAaga < 1:5385842/93‑1 (MQ=255) gAACAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAagag < 1:7448579/93‑1 (MQ=255) aaCAATTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAgg < 2:4146242/93‑1 (MQ=255) aaTTCACCATGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCgg > 1:5477005/1‑93 (MQ=255) aTTCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGt < 2:1690409/93‑1 (MQ=255) ttCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGtt > 2:4081827/1‑93 (MQ=255) ttCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGtt > 2:5937420/1‑93 (MQ=255) ttCACCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGtt > 2:450318/1‑93 (MQ=255) aCCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGt > 2:7518947/1‑93 (MQ=255) aCCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGt > 1:3976896/1‑93 (MQ=255) aCCCTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGt < 2:7332688/93‑1 (MQ=255) cccTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTa < 1:1678071/93‑1 (MQ=255) cccTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTa > 1:426380/1‑93 (MQ=255) cccTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTa > 1:4754161/1‑93 (MQ=255) cccTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTa < 2:5241547/93‑1 (MQ=255) cTGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATc < 1:1084806/93‑1 (MQ=255) cTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATc < 2:3919693/93‑1 (MQ=255) tGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCa > 1:2957833/1‑93 (MQ=255) tGTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCCCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCa > 1:6178719/1‑93 (MQ=255) gTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGATGCGGTTTGTATCaa < 2:5198296/93‑1 (MQ=255) gTTGCGCTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCaa > 2:6871449/1‑93 (MQ=255) gTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCaa < 2:6119657/93‑1 (MQ=255) tGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGa < 2:6952365/93‑1 (MQ=255) cgcTTCTTGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATc > 2:1284621/1‑93 (MQ=255) cttcttGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCAc < 2:2802781/93‑1 (MQ=255) tcttGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACcg > 2:4459883/1‑93 (MQ=255) cttGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACcgc < 2:5481206/93‑1 (MQ=255) cttGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACcgc < 1:1757159/93‑1 (MQ=255) cttGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACcgc < 2:4901433/93‑1 (MQ=255) ttGCAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACcgcg > 2:1902736/1‑93 (MQ=255) tGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCgcgc < 1:2929808/93‑1 (MQ=255) cAGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTg < 1:119141/93‑1 (MQ=255) aGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGa < 1:4461039/93‑1 (MQ=255) aGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGa < 1:4969321/93‑1 (MQ=255) aGGGCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGa < 1:819780/93‑1 (MQ=255) aGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGa > 1:2445946/1‑93 (MQ=255) gggCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGAt < 1:4537071/93‑1 (MQ=255) gggCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGAt < 1:3733196/93‑1 (MQ=255) gggCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGAt < 2:2152212/93‑1 (MQ=255) ggCGTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATg > 1:901627/1‑93 (MQ=255) aTAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCg > 1:4312522/1‑93 (MQ=255) | TGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCG > NC_000913/883152‑883336 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |