BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	946,689	A→G	T144A (ACG→GCG)	b0899 →	putative transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	946,689	0	A	G	84.1%	530.6 / 95.9	239	T144A (ACG→GCG)	b0899	putative transport
Reads supporting (aligned to +/- strand): ref base A (22/16); new base G (113/88); total (135/104)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01

Only 100 of 247 total aligned reads displayed.

ACTCTATTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAGGCAATTCTG  >  NC_000913/946598‑946778

aCTCTATTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAacacac                                                                                          <  2:2071836/93‑1 (MQ=255)

 ctctATTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACAcgcg                                                                                         >  1:624178/1‑93 (MQ=255)

  tctATTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGa                                                                                        <  2:6682411/93‑1 (MQ=255)

  tctATTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGa                                                                                        >  1:1138690/1‑93 (MQ=255)

     aTTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATgg                                                                                     <  2:4249333/93‑1 (MQ=255)

     aTTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATgg                                                                                     <  1:121887/93‑1 (MQ=255)

      tttCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATggg                                                                                    <  1:1966723/93‑1 (MQ=255)

      tttCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATggg                                                                                    >  2:3773056/1‑93 (MQ=255)

      tttCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATggg                                                                                    >  2:2962895/1‑93 (MQ=255)

      tttCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCAACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATggg                                                                                    >  1:3654631/1‑93 (MQ=255)

        tCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGAc                                                                                  >  2:5369629/1‑93 (MQ=255)

        tCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGAc                                                                                  <  2:1087873/93‑1 (MQ=255)

        tCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGAc                                                                                  >  1:3461432/1‑93 (MQ=255)

         cacaCCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGAcc                                                                                 >  2:1341894/1‑93 (MQ=255)

          acacCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGAccc                                                                                <  1:4941786/93‑1 (MQ=255)

          acacCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGAccc                                                                                >  1:3136724/1‑93 (MQ=255)

           cacCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCg                                                                               <  2:4074712/93‑1 (MQ=255)

             ccTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGa                                                                             >  1:6432390/1‑93 (MQ=255)

               ttATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACt                                                                           >  1:503441/1‑93 (MQ=255)

                tATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTg                                                                          >  1:777157/1‑93 (MQ=255)

                tATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTg                                                                          >  1:2466350/1‑93 (MQ=255)

                tATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTg                                                                          >  1:220740/1‑93 (MQ=255)

                  tGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGc                                                                        >  2:1300632/1‑93 (MQ=255)

                  tGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGc                                                                        >  1:4606163/1‑93 (MQ=255)

                  tGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGc                                                                        >  1:4887501/1‑93 (MQ=255)

                       tAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTAtc                                                                   <  2:6731854/93‑1 (MQ=255)

                        aaTTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTAtct                                                                  <  2:1980858/93‑1 (MQ=255)

                          ttgttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTcg                                                                >  1:7490682/1‑93 (MQ=255)

                          ttgttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTcg                                                                <  1:861125/93‑1 (MQ=255)

                          ttgttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTcg                                                                >  1:5425796/1‑93 (MQ=255)

                          ttgttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTcg                                                                >  2:1900903/1‑93 (MQ=255)

                            gttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTcgcc                                                              >  1:5131017/1‑93 (MQ=255)

                            gttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTcgcc                                                              >  2:66031/1‑93 (MQ=255)

                             ttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGCTTAAACACGCGATGGGACCCGGACTGGCTTATCTcgccg                                                             <  2:7380861/93‑1 (MQ=255)

                             ttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTcgccg                                                             >  2:3409151/1‑93 (MQ=255)

                             ttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTcgccg                                                             >  1:6953866/1‑93 (MQ=255)

                             ttgGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTcgccg                                                             >  2:415303/1‑93 (MQ=255)

                               ggTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCcgcg                                                           >  1:3847237/1‑93 (MQ=255)

                                gTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGt                                                          >  1:5946912/1‑93 (MQ=255)

                                gTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGt                                                          <  2:7084371/93‑1 (MQ=255)

                                gTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGt                                                          >  1:5274483/1‑93 (MQ=255)

                                    gTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGAc                                                      >  1:1582423/1‑93 (MQ=255)

                                    gTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGAc                                                      >  1:2107241/1‑93 (MQ=255)

                                     ttAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGAcc                                                     >  2:4935051/1‑93 (MQ=255)

                                     ttAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGAcc                                                     <  1:2917389/93‑1 (MQ=255)

                                     ttAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGAcc                                                     >  2:5015954/1‑93 (MQ=255)

                                        ggCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTAc                                                  >  2:5786676/1‑93 (MQ=255)

                                        ggCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTAc                                                  >  1:6091500/1‑93 (MQ=255)

                                        ggCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTAc                                                  >  1:5526583/1‑93 (MQ=255)

                                         gCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACt                                                 <  2:7117711/93‑1 (MQ=255)

                                          cTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTg                                                >  2:298307/1‑93 (MQ=255)

                                           tCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTgg                                               >  2:7191949/1‑93 (MQ=255)

                                             gACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGggt                                             >  1:897803/1‑93 (MQ=255)

                                              aCCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGggtg                                            >  2:3093860/1‑93 (MQ=255)

                                               ccTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGggtgg                                           >  2:5098231/1‑93 (MQ=255)

                                               ccTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGggtgg                                           >  1:1323623/1‑93 (MQ=255)

                                               ccTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGggtgg                                           <  2:700207/93‑1 (MQ=255)

                                               ccTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGggcgg                                           >  1:2586330/1‑93 (MQ=255)

                                                cTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGggtggt                                          <  2:2608345/93‑1 (MQ=255)

                                                 ttCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGgtggtg                                         >  2:1428468/1‑93 (MQ=255)

                                                 ttCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGgtggtg                                         >  2:7448853/1‑93 (MQ=255)

                                                   cAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCa                                       <  1:5760557/93‑1 (MQ=255)

                                                     aaGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCata                                     >  2:2167028/1‑93 (MQ=255)

                                                      aGATGGGAAGGGCGGGGGCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCatat                                    >  2:1366063/1‑93 (MQ=255)

                                                       gATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATAtt                                   >  1:4481424/1‑93 (MQ=255)

                                                       gATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATAtt                                   <  1:4321489/93‑1 (MQ=255)

                                                        aTGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTc                                  >  1:520135/1‑93 (MQ=255)

                                                        aTGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTc                                  <  1:5363780/93‑1 (MQ=255)

                                                        aTGGGAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTc                                  <  2:4437314/93‑1 (MQ=255)

                                                         tGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTcc                                 >  2:3734185/1‑93 (MQ=255)

                                                          gggAAGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTccc                                <  1:4157000/93‑1 (MQ=255)

                                                             aaGGGCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTAt                             <  1:7000270/93‑1 (MQ=255)

                                                              aGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATc                            <  2:5311183/93‑1 (MQ=255)

                                                               gggCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCt                           <  1:6895085/93‑1 (MQ=255)

                                                               gggCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCt                           >  2:6123767/1‑93 (MQ=255)

                                                                ggCGGGGTCAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTg                          >  2:6543988/1‑93 (MQ=255)

                                                                        cAGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACaaaa                  <  2:184117/93‑1 (MQ=255)

                                                                         aGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACaaaaa                 >  1:3512813/1‑93 (MQ=255)

                                                                         aGTACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACaaaaa                 <  2:3370203/93‑1 (MQ=255)

                                                                           tACCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAAcc               >  2:1256287/1‑93 (MQ=255)

                                                                            aCCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAAccc              <  1:479584/93‑1 (MQ=255)

                                                                            aCCTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAAccc              <  2:5977182/93‑1 (MQ=255)

                                                                             ccTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAAcccc             >  2:2225012/1‑93 (MQ=255)

                                                                             ccTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAAcccc             <  1:5433715/93‑1 (MQ=255)

                                                                              cTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCa            >  1:1084871/1‑93 (MQ=255)

                                                                              cTGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCa            >  2:1647400/1‑93 (MQ=255)

                                                                              cTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCa            >  2:3950056/1‑93 (MQ=255)

                                                                              cTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCa            >  1:6608520/1‑93 (MQ=255)

                                                                               tGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAg           <  1:2287116/93‑1 (MQ=255)

                                                                               tGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAg           >  1:4735462/1‑93 (MQ=255)

                                                                               tGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAg           <  1:3545109/93‑1 (MQ=255)

                                                                               tGGATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAg           >  1:846217/1‑93 (MQ=255)

                                                                                ggATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAgg          >  1:6820494/1‑93 (MQ=255)

                                                                                ggATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAgg          <  1:7201109/93‑1 (MQ=255)

                                                                                ggATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAgg          >  2:59387/1‑93 (MQ=255)

                                                                                 gATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAGGc         >  2:123350/1‑93 (MQ=255)

                                                                                 gATTAAACACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGCGCATATTCCCTATCTGGCACAAAAACCCCAGGc         >  2:2827590/1‑93 (MQ=255)

                                                                                     aaaCACGCGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAGGCAAtt     >  1:3239490/1‑93 (MQ=255)

                                                                                       acacgcGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAGGCAATTCt   >  2:2644674/1‑93 (MQ=255)

                                                                                       acacgcGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAGGCAATTCt   >  1:2837750/1‑93 (MQ=255)

ACTCTATTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAGGCAATTCTG  >  NC_000913/946598‑946778

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`