| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,089,129 | T→C | H795R (CAC→CGC) | ycdS ← | putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,089,129 | 0 | T | C | 87.4% | 717.0 / 86.6 | 285 | H795R (CAC→CGC) | ycdS | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (18/18); new base C (146/103); total (164/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 286 total aligned reads displayed.
ACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAG > NC_000913/1089039‑1089218 | aCTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTgcgt > 2:6841060/1‑93 (MQ=255) gCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTc < 1:2877232/93‑1 (MQ=255) gCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTc < 1:1770607/93‑1 (MQ=255) aTCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTcgc > 2:2465026/1‑91 (MQ=255) aTCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCAc < 2:4104109/93‑1 (MQ=255) tCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCAcc > 2:7479075/1‑93 (MQ=255) tCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCGcc > 2:6323999/1‑93 (MQ=255) cAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCg > 1:1281445/1‑93 (MQ=255) aGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGt > 2:6298528/1‑93 (MQ=255) aGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGt > 2:6380855/1‑93 (MQ=255) ggAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTc > 2:2848574/1‑93 (MQ=255) agaTATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCAt > 1:3484325/1‑93 (MQ=255) gaTATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATa > 2:1941477/1‑93 (MQ=255) atatTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATaa > 2:2176252/1‑93 (MQ=255) atatTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATaa < 2:7303209/93‑1 (MQ=255) atatTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATaa > 1:5478893/1‑93 (MQ=255) atatTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATaa > 2:3145416/1‑93 (MQ=255) tatttattTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAg > 2:6280218/1‑93 (MQ=255) tatttattTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAg > 2:5131852/1‑93 (MQ=255) atttatttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAgg > 1:7056376/1‑93 (MQ=255) atttatttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAgg < 1:7219364/93‑1 (MQ=255) atttatttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAgg > 1:5563402/1‑93 (MQ=255) tttatttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGt < 1:3289135/93‑1 (MQ=255) ttatttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTc > 1:4657368/1‑93 (MQ=255) tatttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCg < 1:1844900/93‑1 (MQ=255) tttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGtt > 1:2024493/1‑93 (MQ=255) tttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGtt > 1:4713803/1‑93 (MQ=255) tttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGtt > 2:44465/1‑93 (MQ=255) tttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGtt > 2:4772102/1‑93 (MQ=255) ttCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGttt < 2:5045448/93‑1 (MQ=255) tCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGtttt < 2:4288148/93‑1 (MQ=255) aTTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTcc > 2:5570003/1‑93 (MQ=255) aTTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTcc > 1:7290272/1‑93 (MQ=255) aTTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTcc > 1:6999878/1‑93 (MQ=255) ttACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTccc > 2:6053734/1‑93 (MQ=255) aCGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCag > 2:7159311/1‑93 (MQ=255) gTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCagcg > 2:1173504/1‑93 (MQ=255) gTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCagcg > 2:6948525/1‑93 (MQ=255) gTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCagcg > 1:283088/1‑93 (MQ=255) aaCATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCagcgta < 1:1076318/93‑1 (MQ=255) aaCATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCagcgta < 1:5942534/93‑1 (MQ=255) aaCATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCagcgta > 2:2559076/1‑93 (MQ=255) atatTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCagcgtagcg < 2:4340837/93‑1 (MQ=255) tatTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCagcgtagcgt > 1:6498293/1‑93 (MQ=255) tatTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCagcgtagcgt < 1:2608588/93‑1 (MQ=255) tatTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCagcgtagcgt > 1:3545384/1‑93 (MQ=255) tttATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTg > 1:208130/1‑93 (MQ=255) tCCTTAAAATCTGAATGTCATATCGAAGTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGcc > 2:6421758/1‑93 (MQ=255) ccTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCa > 2:4671554/1‑93 (MQ=255) cTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAg > 1:1604634/1‑93 (MQ=255) cTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAg > 1:6265545/1‑93 (MQ=255) ttAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGc < 1:5660487/93‑1 (MQ=255) ttAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGc > 2:1379571/1‑93 (MQ=255) aaTCTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatca > 2:1087512/1‑93 (MQ=255) cTGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatcaatc > 1:2271571/1‑93 (MQ=255) tGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatcaatca < 2:422640/93‑1 (MQ=255) tGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatcaatca > 1:669765/1‑93 (MQ=255) tGAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCatcaatca < 1:4259160/93‑1 (MQ=255) gAATGTCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCAc < 2:671853/93‑1 (MQ=255) tCATATCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCAt > 1:7324290/1‑93 (MQ=255) cATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCAtt < 2:5355442/93‑1 (MQ=255) atatCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTc > 2:223/1‑93 (MQ=255) atatCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTc > 2:7360760/1‑93 (MQ=255) atatCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTc < 2:5171648/93‑1 (MQ=255) atatCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTc < 2:909187/93‑1 (MQ=255) atatCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTc > 1:6390667/1‑93 (MQ=255) tatCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTcc < 1:570934/93‑1 (MQ=255) tatCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTcc < 2:1319487/93‑1 (MQ=255) tatCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTcc > 1:3397577/1‑93 (MQ=255) atCGAATTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCa < 2:5900947/93‑1 (MQ=255) tCGAATTCAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCaa < 1:1984114/93‑1 (MQ=255) gAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACt < 1:5321841/93‑1 (MQ=255) aaTTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTa > 1:4380478/1‑93 (MQ=255) aaTTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTa > 1:5032899/1‑93 (MQ=255) aTTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTaa < 1:3909071/93‑1 (MQ=255) aTTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTaa < 2:30230/93‑1 (MQ=255) aTTCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTaa > 2:1115893/1‑93 (MQ=255) ttCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAAt > 1:1199209/1‑93 (MQ=255) tCAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATg < 1:2757404/93‑1 (MQ=255) cAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATgg < 1:4873912/93‑2 (MQ=255) cAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGc < 1:3056056/93‑1 (MQ=255) cAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGc < 2:2120591/93‑1 (MQ=255) cAACGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGc < 2:3510932/93‑1 (MQ=255) cAACGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGc < 1:3845727/93‑1 (MQ=255) aaCGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCg < 1:2224081/93‑1 (MQ=255) aCGTATAAGTTGCGTTCTCTGTCGCCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGt > 2:2273988/1‑93 (MQ=255) aCGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGt > 2:5776173/1‑93 (MQ=255) cGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGtt < 2:166514/93‑1 (MQ=255) cGTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGtt < 2:857134/93‑1 (MQ=255) gTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTg > 2:6517412/1‑93 (MQ=255) gTATAAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTg > 1:755200/1‑93 (MQ=255) tataAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGc < 2:3924650/93‑1 (MQ=255) tataAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGc > 2:3389742/1‑93 (MQ=255) ataAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGcc > 2:2798897/1‑93 (MQ=255) taAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGccc < 2:494081/93‑1 (MQ=255) taAGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGccc > 1:215148/1‑93 (MQ=255) aGTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGt > 2:1752438/1‑93 (MQ=255) gTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTa > 1:1917919/1‑93 (MQ=255) gTTGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTa < 1:3161206/93‑1 (MQ=255) ttGCGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAg < 1:2507753/93‑1 (MQ=255) | ACTCACCAGCATCAGGAGATATTTATTTCCATTACGTAACATATTTATCCTTAAAATCTGAATGTCATATCGAATTCAACGTATAAGTTGTGTTCTCTGTCACCGTCATAAGGTCGTTTTTCCCAGCGTAGCGTTGCGCCAGCATCAATCACGTCATTCCAACTAATGCGTTGCCCGTAG > NC_000913/1089039‑1089218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |