BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,098,156	A→G	T19A (ACA→GCA)	ycdX →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,098,156	0	A	G	85.7%	595.4 / 88.7	252	T19A (ACA→GCA)	ycdX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (20/16); new base G (114/102); total (134/118)
Fisher's exact test for biased strand distribution p-value = 8.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01

Only 100 of 258 total aligned reads displayed.

GCTATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGCGCCGCAT  >  NC_000913/1098066‑1098248

gCTATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGcgca                                                                                            >  2:6435176/1‑93 (MQ=255)

gCTATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGcgca                                                                                            >  2:6756102/1‑93 (MQ=255)

gCTATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGcaca                                                                                            <  1:2735147/93‑1 (MQ=255)

  tATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCAtt                                                                                          <  2:895858/93‑1 (MQ=255)

  tATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCAtt                                                                                          <  2:7218087/93‑1 (MQ=255)

   aTCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTa                                                                                         <  1:5965084/93‑1 (MQ=255)

    tCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTaa                                                                                        <  1:1379292/93‑1 (MQ=255)

    tCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTaa                                                                                        <  1:844947/93‑1 (MQ=255)

    tCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTaa                                                                                        >  2:5070217/1‑93 (MQ=255)

    tCCTTGGCGGGAATGGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTaa                                                                                        >  2:5183693/1‑93 (MQ=255)

     ccTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAg                                                                                       <  1:3794337/93‑1 (MQ=255)

     ccTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAg                                                                                       <  2:5378420/93‑1 (MQ=255)

      cTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGt                                                                                      >  1:3305677/1‑93 (MQ=255)

       ttGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTg                                                                                     >  1:1512048/1‑93 (MQ=255)

       ttGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTg                                                                                     >  1:4239901/1‑93 (MQ=255)

        tGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGa                                                                                    <  1:1003303/93‑1 (MQ=255)

           cGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTa                                                                                 <  2:1719019/93‑1 (MQ=255)

           cGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTa                                                                                 <  2:1485408/93‑1 (MQ=255)

            gggAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTAc                                                                                <  2:5532614/93‑1 (MQ=255)

            gggAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTAc                                                                                <  1:2493062/93‑1 (MQ=255)

            gggAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTAc                                                                                >  1:6632923/1‑93 (MQ=255)

             ggAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACa                                                                               >  1:7262604/1‑93 (MQ=255)

             ggAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACa                                                                               >  1:4400043/1‑93 (MQ=255)

             ggAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACa                                                                               >  2:4790095/1‑93 (MQ=255)

             ggAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACa                                                                               >  2:5651258/1‑93 (MQ=255)

              gAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACAt                                                                              <  2:3389524/93‑1 (MQ=255)

                aTTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTg                                                                            >  1:2338478/1‑93 (MQ=255)

                 ttGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGc                                                                           >  1:2137424/1‑93 (MQ=255)

                 ttGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGc                                                                           <  2:2518975/93‑1 (MQ=255)

                  tGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGcc                                                                          <  1:3697249/93‑1 (MQ=255)

                    aaTACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCa                                                                        >  1:2617189/1‑93 (MQ=255)

                     aTACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAg                                                                       >  1:3625800/1‑93 (MQ=255)

                       aCAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGc                                                                     >  1:448113/1‑93 (MQ=255)

                        cAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGcc                                                                    <  2:3584842/93‑1 (MQ=255)

                        cAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGcc                                                                    >  1:1187850/1‑93 (MQ=255)

                             gagagTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCcaaaca                                                               <  1:6305443/93‑1 (MQ=255)

                                agTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACaaaa                                                            >  1:5221186/1‑93 (MQ=255)

                                agTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACaaaa                                                            <  2:7046911/93‑1 (MQ=255)

                                agTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACaaaa                                                            <  1:7468071/93‑1 (MQ=255)

                                  ttATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAgg                                                          <  1:7075682/93‑1 (MQ=255)

                                  ttATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAgg                                                          >  1:2896611/1‑93 (MQ=255)

                                  ttATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAgg                                                          <  1:577044/93‑1 (MQ=255)

                                  ttATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAgg                                                          >  1:4848141/1‑93 (MQ=255)

                                  ttATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAgg                                                          <  2:4962484/93‑1 (MQ=255)

                                  ttATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAgg                                                          <  1:2689783/93‑1 (MQ=255)

                                    aTGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGc                                                        <  1:5554549/93‑1 (MQ=255)

                                    aTGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGc                                                        <  2:4248001/93‑1 (MQ=255)

                                    aTGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGc                                                        <  2:6351817/93‑1 (MQ=255)

                                     tGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCa                                                       >  2:5002238/1‑93 (MQ=255)

                                      gTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCAt                                                      <  2:1972663/93‑1 (MQ=255)

                                        aTCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTa                                                    >  1:789122/1‑93 (MQ=255)

                                        aTCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTa                                                    >  1:3234943/1‑93 (MQ=255)

                                        aTCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTa                                                    >  2:2435834/1‑93 (MQ=255)

                                           ccGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAAc                                                 >  1:5655980/1‑93 (MQ=255)

                                           ccGTCGACCTTCATATGCATACCGTAGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAAc                                                 <  1:2038703/93‑1 (MQ=255)

                                             gTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACtt                                               >  1:6598127/1‑93 (MQ=255)

                                              tCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACttt                                              <  2:2194005/93‑1 (MQ=255)

                                                gACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACttttt                                            <  1:7394339/93‑1 (MQ=255)

                                                 aCCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTg                                           >  2:1286525/1‑93 (MQ=255)

                                                 aCCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTg                                           >  1:7349549/1‑93 (MQ=255)

                                                 aCCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTg                                           <  2:3967397/93‑1 (MQ=255)

                                                  ccTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGc                                          <  1:1854101/93‑1 (MQ=255)

                                                   cTTCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCGTTAAACTTTTTGCg                                         >  1:3590150/1‑93 (MQ=255)

                                                     tCATATGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGAt                                       >  1:4074883/1‑93 (MQ=255)

                                                       atatGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAATGGCATTAAACTTTTTGCGATCa                                     <  2:4598972/93‑1 (MQ=255)

                                                        tatGCATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCAc                                    <  2:7158333/93‑1 (MQ=255)

                                                            cATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCggt                                <  2:1815270/93‑3 (MQ=255)

                                                            cATACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGAt                                <  2:2650325/93‑1 (MQ=255)

                                                              tACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCa                              >  1:5433912/1‑93 (MQ=255)

                                                              tACCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCa                              >  1:1451972/1‑93 (MQ=255)

                                                               aCCGTTGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCAt                             <  2:6160096/93‑1 (MQ=255)

                                                                   ttGCCAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGcc                         >  2:4438189/1‑93 (MQ=255)

                                                                    tGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGccc                        <  2:6053693/93‑1 (MQ=255)

                                                                      ccAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCgg                      >  1:4862382/1‑93 (MQ=255)

                                                                       cAGCACACATGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGa                     >  1:2365829/1‑93 (MQ=255)

                                                                         gCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGata                   <  1:4524077/93‑1 (MQ=255)

                                                                         gCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGata                   <  1:587975/93‑1 (MQ=255)

                                                                          cacacaTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGatat                  <  1:6068770/93‑1 (MQ=255)

                                                                           acacaTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCTTTAAACTTTTTGCGATCACCGATCATGGCCCGGATATg                 >  2:5920967/1‑93 (MQ=255)

                                                                           acacaTGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATg                 >  1:1960119/1‑93 (MQ=255)

                                                                            cacaTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATgg                >  2:362671/1‑93 (MQ=255)

                                                                            cacaTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATgg                >  2:53284/1‑93 (MQ=255)

                                                                              caTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGaa              <  1:2558271/93‑1 (MQ=255)

                                                                              caTGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGaa              <  1:4755280/93‑1 (MQ=255)

                                                                               aTGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAg             >  2:4217336/1‑93 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa            <  2:416308/93‑1 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa            <  1:5060962/93‑1 (MQ=255)

                                                                                tGCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGa            <  2:6212240/93‑1 (MQ=255)

                                                                                 gCATATAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGAt           <  1:1199821/93‑1 (MQ=255)

                                                                                   atatAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgc         >  2:5451107/1‑93 (MQ=255)

                                                                                   atatAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgc         >  2:6659740/1‑93 (MQ=255)

                                                                                   atatAGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgc         <  2:110525/93‑1 (MQ=255)

                                                                                    tataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcg        >  1:3501141/1‑93 (MQ=255)

                                                                                    tataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcg        >  1:470306/1‑93 (MQ=255)

                                                                                    tataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcg        >  2:4353731/1‑93 (MQ=255)

                                                                                    tataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcg        >  2:6922862/1‑93 (MQ=255)

                                                                                     ataGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATgcgc       >  1:1070734/1‑93 (MQ=255)

                                                                                       aGCGCATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGcgccg     >  2:6822812/1‑93 (MQ=255)

                                                                                          acaTTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGCGCCGCAt  >  2:2925705/1‑93 (MQ=255)

                                                                                          acaTTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGCGCCGCAt  >  2:1056009/1‑93 (MQ=255)

GCTATCCTTGGCGGGAATTGAATACAGGAGAGAGTTATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGCGCCGCAT  >  NC_000913/1098066‑1098248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`