BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,120,179	C→T	M1M (ATG→ATA) †	yceP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,120,179	0	C	T	84.1%	571.3 / 73.9	214	M1M (ATG→ATA) †	yceP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (11/23); new base T (71/109); total (82/132)
Fisher's exact test for biased strand distribution p-value = 5.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.52e-01

Only 100 of 230 total aligned reads displayed.

AAACGCAACATCAGCGCATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTA  >  NC_000913/1120087‑1120271

  aCGCAACATCAGCGCATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCcattat                                                                                            <  1:4699561/93‑1 (MQ=255)

    gCAACATCAGCGCATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATgg                                                                                          <  1:5606351/93‑1 (MQ=255)

     cAACATCAGCGCATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGc                                                                                         <  1:5104362/93‑1 (MQ=255)

      aaCATCAGCGCATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGcc                                                                                        <  2:3171373/93‑1 (MQ=255)

         aTCAGCGCATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGccccc                                                                                     <  1:1069821/93‑1 (MQ=255)

             gcgcATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAAt                                                                                 >  1:5858829/1‑93 (MQ=255)

               gcATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTc                                                                               <  1:7193779/93‑1 (MQ=255)

               gcATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTc                                                                               >  2:3286663/1‑93 (MQ=255)

               ccatcatAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTc                                                                               >  1:5437134/2‑93 (MQ=255)

                 atcatAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCgt                                                                             <  1:2391069/93‑1 (MQ=255)

                  tcatAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCgtg                                                                            >  2:7445579/1‑93 (MQ=255)

                   catAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCgtgt                                                                           >  1:4805469/1‑93 (MQ=255)

                    atAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGtt                                                                          <  1:4127419/93‑1 (MQ=255)

                     tAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTa                                                                         <  2:7264158/93‑1 (MQ=255)

                     tAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTa                                                                         >  1:4467084/1‑93 (MQ=255)

                      aGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTAc                                                                        <  1:100964/93‑1 (MQ=255)

                       gCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACt                                                                       <  2:4299815/93‑1 (MQ=255)

                       gCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACt                                                                       >  1:7066088/1‑93 (MQ=255)

                        cTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTa                                                                      <  1:3405318/93‑1 (MQ=255)

                        cTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTa                                                                      <  1:1649751/93‑1 (MQ=255)

                        cTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTa                                                                      <  1:4262304/93‑1 (MQ=255)

                         tATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAg                                                                     >  1:3834824/1‑93 (MQ=255)

                                ggTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAAcat                                                              <  2:2592201/93‑3 (MQ=255)

                                ggTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGt                                                              <  2:5032923/93‑1 (MQ=255)

                                ggTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGt                                                              <  1:134949/93‑1 (MQ=255)

                                ggTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGt                                                              <  1:1857460/93‑1 (MQ=255)

                                ggTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGt                                                              <  1:769303/93‑1 (MQ=255)

                                 gTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGtt                                                             >  1:213099/1‑93 (MQ=255)

                                 gTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGtt                                                             <  2:2446288/93‑1 (MQ=255)

                                  tGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTa                                                            <  1:5666132/93‑1 (MQ=255)

                                  tGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTa                                                            <  2:7161807/93‑1 (MQ=255)

                                  tGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTa                                                            >  1:5160131/1‑93 (MQ=255)

                                   gCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTAt                                                           <  2:3831736/93‑1 (MQ=255)

                                     tGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTc                                                         <  2:6388617/93‑1 (MQ=255)

                                     tGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTc                                                         >  2:254754/1‑93 (MQ=255)

                                     tGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTc                                                         <  2:7528650/93‑1 (MQ=255)

                                      gATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCg                                                        >  2:1666655/1‑93 (MQ=255)

                                       aTGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGa                                                       <  1:7383167/93‑1 (MQ=255)

                                         gTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAgg                                                     <  1:1486785/93‑1 (MQ=255)

                                         gTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAgg                                                     >  1:699017/1‑93 (MQ=255)

                                          tCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGt                                                    >  2:3492060/1‑93 (MQ=255)

                                           cccACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGtt                                                   >  2:4036436/1‑93 (MQ=255)

                                             cACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCa                                                 <  2:7347869/93‑1 (MQ=255)

                                             cACCCTACGAGCGGATGAGCCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCa                                                 >  1:7270421/1‑93 (MQ=255)

                                              aCCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCaa                                                <  1:3153538/93‑1 (MQ=255)

                                              aCCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCaa                                                >  2:1910880/1‑93 (MQ=255)

                                               cccTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAAt                                               <  1:6219995/93‑1 (MQ=255)

                                               cccTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAAt                                               <  1:3256199/93‑1 (MQ=255)

                                                ccTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATg                                              <  1:977943/93‑1 (MQ=255)

                                                ccTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATg                                              >  1:3564320/1‑93 (MQ=255)

                                                 cTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGc                                             <  1:2884422/93‑1 (MQ=255)

                                                 cTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGc                                             >  1:2024498/1‑93 (MQ=255)

                                                  tACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCg                                            >  2:4552297/1‑93 (MQ=255)

                                                   aCGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGt                                           <  2:225512/93‑1 (MQ=255)

                                                   aCGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGt                                           <  2:6041708/93‑1 (MQ=255)

                                                    cGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGtt                                          <  2:2034394/93‑1 (MQ=255)

                                                        cGGATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTa                                      <  1:1002798/93‑1 (MQ=255)

                                                         ggATGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTAt                                     >  1:3640092/1‑93 (MQ=255)

                                                            tGAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTg                                  <  2:7189516/93‑1 (MQ=255)

                                                             gAGTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGa                                 >  2:1979327/1‑93 (MQ=255)

                                                              aGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGaa                                <  2:7019333/93‑1 (MQ=255)

                                                               gTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAg                               >  2:5374776/1‑93 (MQ=255)

                                                               gTCTGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAg                               >  2:284086/1‑93 (MQ=255)

                                                                  tGAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCaa                            <  2:6857771/93‑1 (MQ=255)

                                                                   gAATGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAAc                           <  2:3526562/93‑1 (MQ=255)

                                                                     aTGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACtt                         >  2:1718229/1‑93 (MQ=255)

                                                                     aTGACTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACtt                         <  1:815377/93‑1 (MQ=255)

                                                                     aTGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACtt                         <  2:160778/93‑1 (MQ=255)

                                                                      tGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTc                        <  1:4655812/93‑1 (MQ=255)

                                                                       gACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCa                       >  2:5425915/1‑93 (MQ=255)

                                                                        aCTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAg                      <  2:5738232/93‑1 (MQ=255)

                                                                        aCTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAg                      <  2:6247130/93‑1 (MQ=255)

                                                                        aCTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAg                      >  2:4085043/1‑93 (MQ=255)

                                                                         cTTCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGt                     <  2:3694631/93‑1 (MQ=255)

                                                                          ttCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGta                    <  2:6956450/93‑1 (MQ=255)

                                                                          ttCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGta                    <  1:1829357/93‑1 (MQ=255)

                                                                          ttCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGta                    <  2:5675488/93‑1 (MQ=255)

                                                                           tCATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGtat                   <  1:5674136/93‑1 (MQ=255)

                                                                            cATTATTTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGtata                  >  1:3709065/1‑93 (MQ=255)

                                                                             attattTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATAc                 <  2:5781046/93‑1 (MQ=255)

                                                                              ttattTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATAcc                >  1:4395464/1‑93 (MQ=255)

                                                                              ttattTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATAcc                >  1:4085896/1‑93 (MQ=255)

                                                                               tattTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCa               >  2:2281528/1‑93 (MQ=255)

                                                                               tattTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCa               >  2:1314597/1‑93 (MQ=255)

                                                                                attTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa              <  1:1140583/93‑1 (MQ=255)

                                                                                attTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa              <  1:5280145/93‑1 (MQ=255)

                                                                                attTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa              <  2:4849405/93‑1 (MQ=255)

                                                                                attTTTTTCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa              <  1:2523977/93‑1 (MQ=255)

                                                                                attTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCaa              <  1:7167757/93‑1 (MQ=255)

                                                                                 tttttttCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAAt             >  2:6627942/1‑93 (MQ=255)

                                                                                   tttttCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAAtaa           >  2:4229970/1‑93 (MQ=255)

                                                                                   tttttCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAAtaa           <  1:2967197/93‑1 (MQ=255)

                                                                                      ttCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAAtaagta        <  2:243842/93‑1 (MQ=255)

                                                                                       tCCATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAAtaagtaa       <  1:1203502/93‑1 (MQ=255)

                                                                                        ccATTATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAAtaagtaag      <  1:6060129/93‑1 (MQ=255)

                                                                                         cattatGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAgg     >  1:4139190/1‑93 (MQ=255)

                                                                                         cattatGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAgg     >  2:4471563/1‑93 (MQ=255)

                                                                                         cattatGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAgg     <  1:2830090/93‑1 (MQ=255)

                                                                                         cattatGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAgg     <  2:1168976/93‑1 (MQ=255)

                                                                                           tcatGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGt   <  2:3934298/93‑1 (MQ=255)

AAACGCAACATCAGCGCATCATAGCTATCAACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTA  >  NC_000913/1120087‑1120271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`