| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,138,489 | A→G | T297A (ACG→GCG) | flgK → | hook‑filament junction protein 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,138,489 | 0 | A | G | 88.3% | 727.1 / 74.6 | 283 | T297A (ACG→GCG) | flgK | hook‑filament junction protein 1 |
| Reads supporting (aligned to +/- strand): ref base A (17/16); new base G (121/129); total (138/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
Only 100 of 286 total aligned reads displayed.
ATATTGAGATCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGAAGATTT > NC_000913/1138400‑1138580 | atatTGAGATCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATgcgc > 2:1887688/1‑93 (MQ=255) tatTGAGATCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCt < 1:4017872/93‑1 (MQ=255) tatTGAGATCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCt > 1:4335029/1‑93 (MQ=255) atTGAGATCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCtt < 2:388399/93‑1 (MQ=255) gagaTCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGa < 2:1513715/93‑1 (MQ=255) gaTCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACa > 2:3631178/1‑93 (MQ=255) aTCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACaa > 2:1241357/1‑93 (MQ=255) tCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAAc > 1:498625/1‑93 (MQ=255) ccGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTg < 2:3123980/93‑1 (MQ=255) ccGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTg < 1:4469988/93‑1 (MQ=255) ccGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTg < 2:2863673/93‑1 (MQ=255) ccGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTg > 2:2609988/1‑93 (MQ=255) cGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTgg < 2:6885194/93‑1 (MQ=255) ggAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGgc < 2:6258605/93‑1 (MQ=255) ggAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGgc < 2:4279397/93‑1 (MQ=255) ggAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGgc > 1:3574304/1‑93 (MQ=255) ggAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGgc > 1:745141/1‑93 (MQ=255) agaAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGgcgc < 1:5895438/93‑1 (MQ=255) agaAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGgcgc < 2:4517407/93‑1 (MQ=255) agaAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGgcgc > 2:5362744/1‑93 (MQ=255) gaAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCt > 1:3904699/1‑93 (MQ=255) aaaTTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTg < 2:139093/93‑1 (MQ=255) aaTTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTgg < 1:4555203/93‑1 (MQ=255) aaTTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTgg > 2:5721793/1‑93 (MQ=255) aTTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGc > 2:3705064/1‑93 (MQ=255) tACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCAt < 2:6074848/93‑1 (MQ=255) aCTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCAtt > 2:6697244/1‑93 (MQ=255) aCTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCAtt < 2:7256169/93‑1 (MQ=255) cTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCAttt < 1:5787368/93‑1 (MQ=255) cTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCAttt < 1:5647443/93‑1 (MQ=255) gAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGc < 1:3465126/93‑1 (MQ=255) aTACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCg > 1:177404/1‑93 (MQ=255) aTACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCg > 2:6552108/1‑93 (MQ=255) tACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGa < 2:2457844/93‑1 (MQ=255) tACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGa > 1:650850/1‑93 (MQ=255) aCCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAg > 2:3006097/1‑93 (MQ=255) gggTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCt > 2:5322992/1‑93 (MQ=255) ggTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCtt < 2:1654703/93‑1 (MQ=255) ggTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCtt > 1:2280838/1‑93 (MQ=255) gTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCttt < 1:931333/93‑1 (MQ=255) tCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTc > 1:6672761/1‑93 (MQ=255) gCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCaa < 2:4032202/93‑1 (MQ=255) gCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTAGCATTTGCCGAGGCTTTCaa < 2:5603140/93‑1 (MQ=255) gggCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAacac > 2:5635298/1‑93 (MQ=255) ggcggcATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACAcc > 1:2205527/1‑93 (MQ=255) ggcATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCaa > 2:2049864/1‑93 (MQ=255) ggcATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCaa > 2:7092382/1‑93 (MQ=255) ggcATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCaa > 2:5009410/1‑93 (MQ=255) ggcATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCaa > 2:836750/1‑93 (MQ=255) gcATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAac > 2:5900710/1‑93 (MQ=255) gcATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAac < 2:4208354/93‑1 (MQ=255) gcATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAac < 2:1306414/93‑1 (MQ=255) cATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAaca < 2:1956802/93‑1 (MQ=255) aTTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAacac > 1:1024625/1‑93 (MQ=255) aTTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAacac < 1:7372463/93‑1 (MQ=255) aTTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAacac > 1:4900350/1‑93 (MQ=255) aTTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAacac > 2:6641491/1‑93 (MQ=255) ttCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAAcgca > 1:4088180/1‑93 (MQ=255) cTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACaaa < 1:5493650/93‑1 (MQ=255) cTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACaaa < 1:4597626/93‑1 (MQ=255) cTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACaaa < 1:1947215/93‑1 (MQ=255) tGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAg > 1:5327398/1‑93 (MQ=255) gACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGc > 1:6237742/1‑93 (MQ=255) gACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGc < 2:3295776/93‑1 (MQ=255) aCATTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGcc < 1:2723529/93‑1 (MQ=255) aTTCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCgg < 2:3259309/93‑1 (MQ=255) ttCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGa > 2:6004077/1‑93 (MQ=255) ttCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGa > 2:1751523/1‑93 (MQ=255) ttCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGa > 2:4397543/1‑93 (MQ=255) tCCGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGAt < 1:3156344/93‑1 (MQ=255) tCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGAt < 1:4538862/93‑1 (MQ=255) cGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGGttt > 1:6971105/1‑93 (MQ=255) cGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGAttt < 2:1825184/93‑1 (MQ=255) cGTTCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGAttt > 1:3024612/1‑93 (MQ=255) ttCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGa > 1:4685063/1‑93 (MQ=255) ttCTCAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGa > 2:512768/1‑93 (MQ=255) tctcAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGAt < 1:3768168/93‑1 (MQ=255) tctcAGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGAt > 2:4734799/1‑93 (MQ=255) tcAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGc < 1:1314637/93‑1 (MQ=255) aGGATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTa < 1:2883372/93‑1 (MQ=255) ggATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTaa > 2:641746/1‑93 (MQ=255) gATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAAc > 1:2533965/1‑93 (MQ=255) gATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAAc < 2:5472271/93‑1 (MQ=255) gATCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAAc < 1:6789911/93‑1 (MQ=255) aTCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACg < 2:110598/93‑1 (MQ=255) tCTGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACgg < 2:2265653/93‑1 (MQ=255) tGGACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCg > 1:1484685/1‑93 (MQ=255) ggACCAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGa < 1:5383006/93‑1 (MQ=255) ggACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGa < 1:703202/93‑1 (MQ=255) ccAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGc < 2:4890443/93‑1 (MQ=255) ccAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGc < 2:7529059/93‑1 (MQ=255) cAGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGcc < 1:5131020/93‑1 (MQ=255) aGACGCGTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCg < 2:2827804/93‑1 (MQ=255) gcgTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGa < 1:4198264/93‑1 (MQ=255) gcgTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGa > 1:2060069/1‑93 (MQ=255) cgTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGaa < 2:5813826/93‑1 (MQ=255) cgTAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGaa < 1:2429377/93‑1 (MQ=255) tAATGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGAAGa > 1:2143459/1‑93 (MQ=255) aaTGCGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGAAGAt < 1:5557698/93‑1 (MQ=255) aTACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGAAGAtt > 1:1906914/1‑93 (MQ=255) | ATATTGAGATCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGAAGATTT > NC_000913/1138400‑1138580 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |