Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,176,507 T→C R222R (CGT→CGC ycfV → putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,176,5070TC86.5% 651.0 / 86.9 267R222R (CGT→CGCycfVputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base T (14/22);  new base C (101/130);  total (115/152)
Fisher's exact test for biased strand distribution p-value = 7.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01

Only 100 of 273 total aligned reads displayed.

TCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGACGGCGGCGC  >  NC_000913/1176417‑1176599
                                                                                          |                                                                                            
tCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCt                                                                                            <  1:5169185/93‑1 (MQ=255)
tCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCt                                                                                            >  2:1074119/1‑93 (MQ=255)
tCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCt                                                                                            >  2:2198641/1‑93 (MQ=255)
  gCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGa                                                                                          >  1:6794393/1‑93 (MQ=255)
     tGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGAcgg                                                                                       <  2:3508009/93‑1 (MQ=255)
      gCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGAcggc                                                                                      <  1:3447955/93‑1 (MQ=255)
             aCCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTg                                                                               >  1:5887802/1‑93 (MQ=255)
                gCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGc                                                                            >  2:5921857/1‑93 (MQ=255)
                gCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGc                                                                            >  2:4031238/1‑93 (MQ=255)
                 ccTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGcc                                                                           >  1:1113857/1‑93 (MQ=255)
                  cTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCt                                                                          >  2:117024/1‑93 (MQ=255)
                  cTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCt                                                                          <  1:4467346/93‑1 (MQ=255)
                   ttCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTg                                                                         >  1:4724757/1‑93 (MQ=255)
                   ttCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTg                                                                         >  2:2390348/1‑93 (MQ=255)
                    tCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGa                                                                        >  2:4293484/1‑93 (MQ=255)
                    tCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGa                                                                        >  2:4591424/1‑93 (MQ=255)
                    tCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGa                                                                        >  2:7118756/1‑93 (MQ=255)
                     ccTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGAt                                                                       <  2:5536612/93‑1 (MQ=255)
                     ccTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGAt                                                                       <  2:6190651/93‑1 (MQ=255)
                      cTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATg                                                                      <  2:953320/93‑1 (MQ=255)
                       tggtggTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATgg                                                                     <  1:1895267/93‑1 (MQ=255)
                       tggtggTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATgg                                                                     >  1:533897/1‑93 (MQ=255)
                         gtggtTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATgggg                                                                   >  2:7483400/1‑93 (MQ=255)
                           ggtTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGc                                                                 <  1:159253/93‑1 (MQ=255)
                            gtTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCg                                                                <  1:826460/93‑1 (MQ=255)
                            gtTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCg                                                                <  1:6099374/93‑1 (MQ=255)
                             ttACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCgg                                                               >  2:6732028/1‑93 (MQ=255)
                              tACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATTGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGa                                                              <  2:635298/93‑1 (MQ=255)
                              tACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGa                                                              <  2:6432232/93‑1 (MQ=255)
                                cTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGt                                                            >  2:1330275/1‑93 (MQ=255)
                                 tCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTa                                                           <  1:2597405/93‑1 (MQ=255)
                                   aCGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAAt                                                         <  1:1099154/93‑1 (MQ=255)
                                   aCGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAAt                                                         <  1:4045228/93‑1 (MQ=255)
                                    cGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATg                                                        <  2:6021960/93‑1 (MQ=255)
                                    cGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATg                                                        >  2:3670035/1‑93 (MQ=255)
                                    cGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATg                                                        <  1:5405204/93‑1 (MQ=255)
                                     gACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATgg                                                       <  2:5109116/93‑1 (MQ=255)
                                      aCCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGc                                                      >  2:2777731/1‑93 (MQ=255)
                                      aCCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGc                                                      <  2:850393/93‑1 (MQ=255)
                                       ccTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCg                                                     >  2:3346734/1‑93 (MQ=255)
                                        cTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGa                                                    <  2:6682477/93‑1 (MQ=255)
                                        cTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGa                                                    >  1:6933462/1‑93 (MQ=255)
                                         tGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGAt                                                   <  2:7026120/93‑1 (MQ=255)
                                         tGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGAt                                                   >  1:5755981/1‑93 (MQ=255)
                                         tGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGAt                                                   >  1:2089431/1‑93 (MQ=255)
                                         tGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGAt                                                   >  2:518369/1‑93 (MQ=255)
                                           cAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGc                                                 <  1:223879/93‑1 (MQ=255)
                                           cAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGc                                                 <  1:3046439/93‑1 (MQ=255)
                                             aCTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCt                                               >  1:496867/1‑93 (MQ=255)
                                              cTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCtt                                              <  2:158079/93‑1 (MQ=255)
                                              cTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCtt                                              <  2:5847441/93‑1 (MQ=255)
                                                ggCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTa                                            <  1:557470/93‑1 (MQ=255)
                                                  cGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATc                                          <  2:5605163/93‑1 (MQ=255)
                                                  cGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATc                                          <  1:431119/93‑1 (MQ=255)
                                                   gAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCg                                         <  2:1929891/93‑1 (MQ=255)
                                                   gAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCg                                         >  2:695666/1‑93 (MQ=255)
                                                   gAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCg                                         >  1:2359/1‑93 (MQ=255)
                                                      aCGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGtta                                      <  1:3728371/93‑1 (MQ=255)
                                                       cGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGttat                                     <  2:1893341/93‑1 (MQ=255)
                                                       cGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGttat                                     >  1:4524635/1‑93 (MQ=255)
                                                       cGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGttat                                     >  1:2258550/1‑93 (MQ=255)
                                                        gTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGttatt                                    >  1:3921247/1‑93 (MQ=255)
                                                           tGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAAt                                 <  2:2472769/93‑1 (MQ=255)
                                                           tGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAAt                                 <  2:4158465/93‑1 (MQ=255)
                                                           tGAGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAAt                                 >  2:4694180/1‑93 (MQ=255)
                                                             aGCCGCCAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTg                               <  2:1404747/93‑1 (MQ=255)
                                                               ccgccAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGc                             >  1:1826291/1‑93 (MQ=255)
                                                                cgccAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGcc                            <  2:5694221/93‑1 (MQ=255)
                                                                   cAGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGc                         >  2:4913207/1‑93 (MQ=255)
                                                                    aGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCg                        >  2:3142220/1‑93 (MQ=255)
                                                                    aGTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCg                        >  1:3509088/1‑93 (MQ=255)
                                                                     gTTAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGt                       >  1:3548414/1‑93 (MQ=255)
                                                                      ttAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGtt                      <  2:3590942/93‑1 (MQ=255)
                                                                      ttAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGtt                      >  1:6770757/1‑93 (MQ=255)
                                                                      ttAGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGtt                      >  1:7167866/1‑93 (MQ=255)
                                                                        aGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGtttt                    <  1:3761701/93‑1 (MQ=255)
                                                                        aGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGtttt                    <  2:6136187/93‑1 (MQ=255)
                                                                        aGAAATGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGtttt                    <  2:1791540/93‑1 (MQ=255)
                                                                         gAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTa                   >  2:27342/1‑93 (MQ=255)
                                                                           aaTGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGt                 >  2:2998837/1‑93 (MQ=255)
                                                                           aaTGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGt                 <  1:7156974/93‑1 (MQ=255)
                                                                           aaTGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGt                 >  2:6053867/1‑93 (MQ=255)
                                                                            aTGCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTc                <  1:4151412/93‑1 (MQ=255)
                                                                             tGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTcg               >  2:4752631/1‑93 (MQ=255)
                                                                              gCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTcgc              <  1:1316126/93‑1 (MQ=255)
                                                                              gCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTcgc              <  1:7480455/93‑1 (MQ=255)
                                                                              gCGTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTcgc              <  2:290914/93‑1 (MQ=255)
                                                                               tgTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTcgcg             <  1:6486459/92‑1 (MQ=255)
                                                                                gTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCgg            >  2:3917222/1‑93 (MQ=255)
                                                                                gTGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCgg            >  1:5551751/1‑93 (MQ=255)
                                                                                 tGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGa           <  1:6688122/93‑1 (MQ=255)
                                                                                 tGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGa           <  1:2561474/93‑1 (MQ=255)
                                                                                 tGATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGa           >  1:5064364/1‑93 (MQ=255)
                                                                                  gATGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGAc          >  1:2455808/1‑93 (MQ=255)
                                                                                   aTGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGAcg         <  2:7377778/93‑1 (MQ=255)
                                                                                    tGGTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGAcgg        <  2:6268615/93‑1 (MQ=255)
                                                                                     ggTCGCCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGAcggc       <  1:2895994/93‑1 (MQ=255)
                                                                                       tcgccTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGAcggcgg     <  1:313206/93‑1 (MQ=255)
                                                                                       tcgccTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGAcggcgg     <  2:2703957/93‑1 (MQ=255)
                                                                                         gtcTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGACGgcggcg   >  1:6354406/1‑93 (MQ=255)
                                                                                          |                                                                                            
TCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGACGGCGGCGC  >  NC_000913/1176417‑1176599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: