BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,192,608	A→G	V130A (GTA→GCA)	ycfB ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,192,608	0	A	G	87.5%	581.0 / 72.6	239	V130A (GTA→GCA)	ycfB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (15/15); new base G (102/107); total (117/122)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.68e-01

Only 100 of 254 total aligned reads displayed.

TGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGCACAGAATA  >  NC_000913/1192518‑1192700

tGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGacgtgcg                                                                                            >  1:4863956/1‑93 (MQ=255)

 ggCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGacgtgcgt                                                                                           <  2:4255632/93‑1 (MQ=255)

  gCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGAcgtgcgta                                                                                          <  1:3758133/93‑1 (MQ=255)

   cTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTaa                                                                                         <  1:4276511/93‑1 (MQ=255)

   cTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTaa                                                                                         <  2:1878990/93‑1 (MQ=255)

    tGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAAt                                                                                        >  1:6151640/1‑93 (MQ=255)

    tGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAAt                                                                                        <  2:4095821/93‑1 (MQ=255)

    tGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAAt                                                                                        <  2:2216509/93‑1 (MQ=255)

       gCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACGTCGGCCCGACGTGCGTAATGAc                                                                                     <  1:1615532/93‑1 (MQ=255)

       gCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGAc                                                                                     <  1:7004661/93‑1 (MQ=255)

        cGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGAcc                                                                                    >  1:5252422/1‑93 (MQ=255)

         gTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCg                                                                                   >  2:206148/1‑93 (MQ=255)

           ataAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGt                                                                                 >  1:4627351/1‑93 (MQ=255)

            taAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTa                                                                                >  1:6357846/1‑93 (MQ=255)

            taAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTa                                                                                <  2:1073882/93‑1 (MQ=255)

              aaGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGc                                                                              <  1:2313872/93‑1 (MQ=255)

              aaGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGc                                                                              <  1:4129494/93‑1 (MQ=255)

               aGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCg                                                                             >  2:1586423/1‑93 (MQ=255)

                 gAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGat                                                                           <  2:4420646/93‑1 (MQ=255)

                  aaGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGata                                                                          <  2:6136417/93‑1 (MQ=255)

                   aGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGatat                                                                         >  1:7022276/1‑93 (MQ=255)

                    gTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGAtata                                                                        >  1:2363217/1‑93 (MQ=255)

                    gTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGAtata                                                                        >  1:891323/1‑93 (MQ=255)

                    gTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGAtata                                                                        >  2:3377486/1‑93 (MQ=255)

                      aGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAAt                                                                      <  1:5796549/93‑1 (MQ=255)

                       gCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATc                                                                     >  2:3793485/1‑93 (MQ=255)

                       gCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATc                                                                     >  1:6738545/1‑93 (MQ=255)

                       gCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATc                                                                     <  1:2809902/93‑1 (MQ=255)

                       gCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATc                                                                     <  1:246629/93‑1 (MQ=255)

                       gCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGATATAATc                                                                     <  1:3856204/93‑1 (MQ=255)

                         tctGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCgg                                                                   <  1:3579743/93‑1 (MQ=255)

                           tGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCa                                                                 >  1:5105903/1‑93 (MQ=255)

                           tGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCa                                                                 >  1:7235739/1‑93 (MQ=255)

                            ggTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGATATAATCGGCAc                                                                >  1:3334282/1‑93 (MQ=255)

                              tCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCt                                                              >  2:1002267/1‑93 (MQ=255)

                              tCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCt                                                              <  2:5797728/93‑1 (MQ=255)

                               cTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTa                                                             <  1:1370295/93‑1 (MQ=255)

                                tttATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGATATAATCGGCACCTaa                                                            >  1:881151/1‑93 (MQ=255)

                                 ttATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTaaa                                                           >  2:5875632/1‑93 (MQ=255)

                                 ttATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTaaa                                                           <  1:4419182/93‑1 (MQ=255)

                                  tATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAAt                                                          >  2:324687/1‑93 (MQ=255)

                                  tATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGATATAATCGGCACCTAAAt                                                          <  1:5566500/93‑1 (MQ=255)

                                   aTTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATc                                                         <  1:2996967/93‑1 (MQ=255)

                                   aTTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATc                                                         >  1:3672595/1‑93 (MQ=255)

                                   aTTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATc                                                         >  2:5368217/1‑93 (MQ=255)

                                    ttGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCt                                                        >  1:1952224/1‑93 (MQ=255)

                                    ttGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCt                                                        <  1:2095384/93‑1 (MQ=255)

                                    ttGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCt                                                        <  1:3934472/93‑1 (MQ=255)

                                    ttGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCt                                                        >  1:1525722/1‑93 (MQ=255)

                                     tGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCtt                                                       <  2:7418361/93‑1 (MQ=255)

                                      gCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTc                                                      <  2:1547514/93‑1 (MQ=255)

                                      gCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTc                                                      >  1:1723142/1‑93 (MQ=255)

                                       cTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTcg                                                     <  1:6319135/93‑1 (MQ=255)

                                          tCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCCCCCAAATTTTcggcg                                                  >  1:1579335/1‑93 (MQ=255)

                                          tCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTcggcg                                                  <  2:904519/93‑1 (MQ=255)

                                           ccAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTcggcgg                                                 <  2:6708623/93‑1 (MQ=255)

                                             aGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCa                                               <  2:4393543/93‑1 (MQ=255)

                                              gACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCaa                                              >  2:1442982/1‑93 (MQ=255)

                                               aCCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCaaa                                             >  2:4714440/1‑93 (MQ=255)

                                                 cACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAAtt                                           >  2:5423454/1‑93 (MQ=255)

                                                  aCGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTc                                          <  2:4598478/93‑1 (MQ=255)

                                                    gcagcaGGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGa                                        >  1:6514146/1‑93 (MQ=255)

                                                     cagcagGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAg                                       <  2:3918515/93‑1 (MQ=255)

                                                      agcagGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAgg                                      >  2:3206801/1‑93 (MQ=255)

                                                      agcagGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAgg                                      <  1:537480/93‑1 (MQ=255)

                                                       gcagGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGa                                     <  1:3217393/93‑1 (MQ=255)

                                                       gcagGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGa                                     >  2:561423/1‑93 (MQ=255)

                                                       gcagGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGa                                     >  2:2873620/1‑93 (MQ=255)

                                                       gcagGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCAACTAAATCTTCGGCGGCAAATTCGAGGa                                     >  2:2927116/1‑93 (MQ=255)

                                                         agGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAg                                   <  1:3059428/93‑1 (MQ=255)

                                                         agGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAg                                   >  1:7508356/1‑93 (MQ=255)

                                                         agGCGGCTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAg                                   >  1:1227894/1‑93 (MQ=255)

                                                           gcggcTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGc                                 >  1:5465720/1‑93 (MQ=255)

                                                            cggcTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCt                                >  2:31/1‑93 (MQ=255)

                                                              gcTCTTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCttt                              >  2:5690919/1‑93 (MQ=255)

                                                                tctTGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTaa                            <  2:7212502/93‑1 (MQ=255)

                                                                  ttGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAAt                          >  2:938174/1‑93 (MQ=255)

                                                                  ttGCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAAt                          <  1:4046767/93‑1 (MQ=255)

                                                                    gCCATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAAttt                        <  1:6948418/93‑1 (MQ=255)

                                                                     ccATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTg                       <  2:5025028/93‑1 (MQ=255)

                                                                     ccATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTg                       <  2:1325377/93‑1 (MQ=255)

                                                                      cATCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGa                      <  2:2998754/93‑1 (MQ=255)

                                                                       aTCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGAt                     >  1:2902364/1‑93 (MQ=255)

                                                                        tCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGAtc                    >  2:86179/1‑93 (MQ=255)

                                                                        tCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGAtc                    <  2:2371558/93‑1 (MQ=255)

                                                                        tCGACATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGAtc                    >  2:6564014/1‑93 (MQ=255)

                                                                           aCATCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATctct                 >  2:5110943/1‑93 (MQ=255)

                                                                             aTCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCttt               <  2:2782713/93‑1 (MQ=255)

                                                                              tCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTttg              >  2:3848832/1‑93 (MQ=255)

                                                                              tCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTttg              >  2:6934530/1‑93 (MQ=255)

                                                                              tCGGCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTttg              <  2:676539/93‑1 (MQ=255)

                                                                               cGGCCCGACGTGCGTAATGACCGGTAGCGATAT‑ATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTttgtt            <  2:7387458/93‑1 (MQ=255)

                                                                                ggCCCGACGTGCGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTttgtt            <  1:4705865/93‑1 (MQ=255)

                                                                                   ccGACGTGCGTGATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGca         <  1:6819950/93‑1 (MQ=255)

                                                                                       cgtgcgtaATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGCACAGa     <  1:7380631/93‑1 (MQ=255)

                                                                                       cgtgcgtaATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGCACAGa     <  2:3650940/93‑1 (MQ=255)

                                                                                         tacgtaATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGCACAGAat   >  1:2187778/1‑93 (MQ=255)

                                                                                         tacgtaATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGCACAGAat   >  1:5278341/1‑93 (MQ=255)

                                                                                         tacgtaATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGCACAGAat   >  1:1993973/1‑93 (MQ=255)

                                                                                          acgtaATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGCACAGAata  <  2:7288355/93‑1 (MQ=255)

TGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACGTAATGACCGGTAGCGATATAATCGGCACCTAAATCTTCGGCGGCAAATTCGAGGAAGGCTTTAAATTTGATCTCTTTGTTGCACAGAATA  >  NC_000913/1192518‑1192700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`