Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,329,903 A→G S278G (AGT→GGT)  topA → DNA topoisomerase type I omega protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,329,9030AG90.2% 630.1 / 53.8 236S278G (AGT→GGT) topADNA topoisomerase type I omega protein
Reads supporting (aligned to +/- strand):  ref base A (9/14);  new base G (108/105);  total (117/119)
Fisher's exact test for biased strand distribution p-value = 3.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.56e-01

Only 100 of 238 total aligned reads displayed.

GTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATG  >  NC_000913/1329811‑1329992
                                                                                            |                                                                                         
  ccgGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGt                                                                                         <  2:1806336/93‑1 (MQ=255)
   cgGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTa                                                                                        <  1:6043614/93‑1 (MQ=255)
   cgGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTa                                                                                        >  1:4097535/1‑93 (MQ=255)
    ggTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTATAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTaa                                                                                       >  1:3952372/1‑93 (MQ=255)
    ggTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTaa                                                                                       <  2:4767504/93‑1 (MQ=255)
    ggTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTaa                                                                                       >  1:3836417/1‑93 (MQ=255)
     gTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTaaa                                                                                      >  2:5835913/1‑93 (MQ=255)
      tCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAAc                                                                                     <  2:4732886/93‑1 (MQ=255)
         acaaAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTg                                                                                  >  1:4368107/1‑93 (MQ=255)
          caaAGAACAAACTCAGGCTGTGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTgg                                                                                 <  2:188534/93‑1 (MQ=255)
          caaAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTgg                                                                                 >  2:5360792/1‑93 (MQ=255)
           aaaGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGgc                                                                                >  2:2337591/1‑93 (MQ=255)
           aaaGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGgc                                                                                >  1:2292953/1‑93 (MQ=255)
             aGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGgcgc                                                                              >  1:5922873/1‑93 (MQ=255)
             aGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGgcgc                                                                              <  1:3396706/93‑1 (MQ=255)
              gAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCt                                                                             >  1:4005854/1‑93 (MQ=255)
              gAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCt                                                                             <  2:2217313/93‑1 (MQ=255)
                aCAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTcc                                                                           <  2:2590160/93‑1 (MQ=255)
                aCAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTcc                                                                           >  1:1809889/1‑93 (MQ=255)
                   aaCTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCttt                                                                        <  2:1250589/93‑1 (MQ=255)
                    aCTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCtttt                                                                       >  2:1002202/1‑93 (MQ=255)
                    aCTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCtttt                                                                       >  2:5920590/1‑93 (MQ=255)
                     cTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTtta                                                                      >  1:6869005/1‑93 (MQ=255)
                     cTCAGGCTGCGGTAAGTCTGAAGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTtta                                                                      <  1:2611243/93‑1 (MQ=255)
                      tCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTttat                                                                     <  1:7450180/93‑1 (MQ=255)
                      tCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTttat                                                                     <  1:1710655/93‑1 (MQ=255)
                         ggCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTAc                                                                  <  2:5975535/93‑1 (MQ=255)
                         ggCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTAc                                                                  >  1:1003085/1‑93 (MQ=255)
                         ggCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTAc                                                                  <  1:5060230/93‑1 (MQ=255)
                              cGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTa                                                             <  1:4314790/93‑1 (MQ=255)
                              cGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTa                                                             <  1:6461281/93‑1 (MQ=255)
                              cGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTa                                                             <  2:1978016/93‑1 (MQ=255)
                               ggTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTAc                                                            <  1:6087586/93‑1 (MQ=255)
                               ggTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTAc                                                            <  2:5465365/93‑1 (MQ=255)
                                 tAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGc                                                          <  2:1567454/93‑1 (MQ=255)
                                 tAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGc                                                          >  2:1414758/1‑93 (MQ=255)
                                  aaGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCt                                                         >  2:2952754/1‑93 (MQ=255)
                                    gTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGc                                                       <  1:1243511/93‑1 (MQ=255)
                                    gTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGc                                                       >  2:1270777/1‑93 (MQ=255)
                                    gTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGc                                                       >  1:2716359/1‑93 (MQ=255)
                                     tCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGca                                                      >  2:3291884/1‑93 (MQ=255)
                                      ctgctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGcaa                                                     <  1:1428986/93‑1 (MQ=255)
                                       tgctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGcaac                                                    >  2:6272075/1‑93 (MQ=255)
                                       tgctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGcaac                                                    >  1:857229/1‑93 (MQ=255)
                                        gctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGcaaca                                                   >  2:3515264/1‑93 (MQ=255)
                                        gctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGcaaca                                                   >  1:7377156/1‑93 (MQ=255)
                                        gctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGcaaca                                                   >  2:4329632/1‑93 (MQ=255)
                                         ctgGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGcaacaa                                                  <  2:6567337/93‑1 (MQ=255)
                                           ggAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGc                                                >  2:5883040/1‑93 (MQ=255)
                                            gAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCt                                               >  2:4919166/1‑93 (MQ=255)
                                             aaaaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTg                                              <  1:2187902/93‑1 (MQ=255)
                                              aaaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGc                                             >  1:1088347/1‑93 (MQ=255)
                                               aaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGcc                                            >  1:285835/1‑93 (MQ=255)
                                               aaaGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGcc                                            >  2:7373672/1‑93 (MQ=255)
                                                 aGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAg                                          >  1:3548153/1‑93 (MQ=255)
                                                      gcTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCAccc                                     >  2:616942/1‑93 (MQ=255)
                                                        tACAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGt                                   >  1:5126709/1‑93 (MQ=255)
                                                         aCAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTc                                  >  2:729672/1‑93 (MQ=255)
                                                          cAGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCt                                 <  1:1158409/93‑1 (MQ=255)
                                                          cAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCt                                 >  2:1065133/1‑93 (MQ=255)
                                                          cAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCt                                 <  2:1634675/93‑1 (MQ=255)
                                                           aGCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCtt                                >  2:4570990/1‑93 (MQ=255)
                                                           aGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCtt                                <  2:451510/93‑1 (MQ=255)
                                                            gCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTg                               <  2:7312744/93‑1 (MQ=255)
                                                            gCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTg                               <  2:3135006/93‑1 (MQ=255)
                                                            gCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTg                               <  1:1816531/93‑1 (MQ=255)
                                                            gCGTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTg                               <  2:5097483/93‑1 (MQ=255)
                                                              gTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGa                             >  2:4877835/1‑93 (MQ=255)
                                                              gTGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGa                             <  2:2644480/93‑1 (MQ=255)
                                                               tGCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAt                            >  2:2818246/1‑93 (MQ=255)
                                                                gCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAtt                           >  2:3921681/1‑93 (MQ=255)
                                                                gCTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAtt                           <  1:2915559/93‑1 (MQ=255)
                                                                 cTGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGAttt                          <  1:5949054/93‑1 (MQ=255)
                                                                  tGGAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTg                         >  2:532403/1‑93 (MQ=255)
                                                                   ggAACGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTgg                        >  1:2996115/1‑93 (MQ=255)
                                                                     aaCGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCg                      <  1:1554122/93‑1 (MQ=255)
                                                                      aCGTGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGt                     >  1:6622262/1‑93 (MQ=255)
                                                                         tGAAGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaa                  <  2:1149467/93‑1 (MQ=255)
                                                                           aaGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaa                <  2:6461743/93‑1 (MQ=255)
                                                                            aGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaa               >  1:1529679/1‑93 (MQ=255)
                                                                            aGACAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaa               <  1:5712724/93‑1 (MQ=255)
                                                                              aCAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaaaa             >  2:3361677/1‑93 (MQ=255)
                                                                              aCAAACCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGaaaaaaa             >  2:7447301/1‑93 (MQ=255)
                                                                                 aaCCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCa          <  2:874623/93‑1 (MQ=255)
                                                                                 aaCCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCa          <  1:7272370/93‑1 (MQ=255)
                                                                                 aaCCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCa          <  2:422224/93‑1 (MQ=255)
                                                                                  aCCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCat         <  1:3474378/93‑1 (MQ=255)
                                                                                  aCCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCat         >  1:5526385/1‑93 (MQ=255)
                                                                                  aCCGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCat         <  2:560742/93‑1 (MQ=255)
                                                                                   ccGACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatg        >  1:2811909/1‑93 (MQ=255)
                                                                                     gACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgat      >  1:6371569/1‑93 (MQ=255)
                                                                                     gACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgat      <  1:239340/93‑1 (MQ=255)
                                                                                     gACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgat      <  1:1270256/93‑1 (MQ=255)
                                                                                     gACAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgat      <  2:3371659/93‑1 (MQ=255)
                                                                                     gACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgat      <  2:6733358/93‑1 (MQ=255)
                                                                                       cAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatga    <  1:5326572/93‑1 (MQ=255)
                                                                                       cAACCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatga    <  2:7195441/93‑1 (MQ=255)
                                                                                        aaCCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatgat   <  1:5571367/93‑1 (MQ=255)
                                                                                        aaCCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatgat   <  1:6704848/93‑1 (MQ=255)
                                                                                         aCCGGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCatgatgatg  >  2:6927322/1‑93 (MQ=255)
                                                                                            |                                                                                         
GTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATG  >  NC_000913/1329811‑1329992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: