Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,358,630 A→G V101V (GTT→GTC b1297 ← putative glutamine synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,358,6300AG85.4% 571.9 / 88.6 246V101V (GTT→GTCb1297putative glutamine synthetase
Reads supporting (aligned to +/- strand):  ref base A (19/17);  new base G (109/101);  total (128/118)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.15e-01

Only 100 of 246 total aligned reads displayed.

GGGAGCGCCATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGC  >  NC_000913/1358540‑1358719
                                                                                          |                                                                                         
   aGCGCCATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGAcaca                                                                                      <  2:1150549/93‑1 (MQ=255)
   aGCGCCATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGAcaca                                                                                      <  2:5786797/93‑1 (MQ=255)
   aGCGCCATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGAcaca                                                                                      <  1:550698/93‑1 (MQ=255)
    gcgcCATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAg                                                                                     <  1:1304481/93‑1 (MQ=255)
     cgcCATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAgg                                                                                    <  2:2411845/93‑1 (MQ=255)
       ccATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAggga                                                                                  >  1:1512218/1‑91 (MQ=255)
       ccATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTa                                                                                  >  2:1674981/1‑93 (MQ=255)
       ccATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTa                                                                                  >  1:2953030/1‑93 (MQ=255)
       ccATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTa                                                                                  <  1:2414904/93‑1 (MQ=255)
        cATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTAc                                                                                 >  2:6158211/1‑93 (MQ=255)
        cATCTTCATCGACCATGGTCAGGACCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTAc                                                                                 >  1:7060967/1‑93 (MQ=255)
         aTCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACg                                                                                >  1:1544784/1‑93 (MQ=255)
         aTCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACg                                                                                >  1:4063413/1‑93 (MQ=255)
          tCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGa                                                                               >  1:7502819/1‑93 (MQ=255)
          tCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGa                                                                               >  2:186202/1‑93 (MQ=255)
           cTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGAt                                                                              <  1:4720529/93‑1 (MQ=255)
           cTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGAt                                                                              <  2:3723466/93‑1 (MQ=255)
            ttCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATc                                                                             <  2:7523780/93‑1 (MQ=255)
             tCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATcc                                                                            >  1:5203135/1‑93 (MQ=255)
             tCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATcc                                                                            <  1:1799538/93‑1 (MQ=255)
              cATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCg                                                                           <  1:4462885/93‑1 (MQ=255)
              cATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCg                                                                           >  1:64387/1‑93 (MQ=255)
               aTCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCgg                                                                          >  2:5259062/1‑93 (MQ=255)
                tCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGc                                                                         >  2:2740095/1‑93 (MQ=255)
                 cGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCt                                                                        >  2:5643349/1‑93 (MQ=255)
                  gACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTc                                                                       <  1:4987161/93‑1 (MQ=255)
                   aCCATGGCCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTAAGATCCGGCTCg                                                                      >  1:3685064/1‑93 (MQ=255)
                    ccATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGc                                                                     >  2:4195881/1‑93 (MQ=255)
                    ccATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGc                                                                     >  1:6305199/1‑93 (MQ=255)
                     cATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGcc                                                                    >  2:6630503/1‑93 (MQ=255)
                      aTGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGccc                                                                   <  1:4271480/93‑1 (MQ=255)
                      aTGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGccc                                                                   >  2:4622714/1‑93 (MQ=255)
                       tGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCa                                                                  >  1:1819006/1‑93 (MQ=255)
                         gTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCAtt                                                                <  1:1076703/93‑1 (MQ=255)
                             ggAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCCTTTCCt                                                            >  1:1071621/1‑93 (MQ=255)
                             ggAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCCTTTCCt                                                            >  2:3554220/1‑93 (MQ=255)
                             ggAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCt                                                            <  1:5022287/93‑1 (MQ=255)
                             ggAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCt                                                            <  2:1266597/93‑1 (MQ=255)
                               aGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGa                                                          <  2:3350930/93‑1 (MQ=255)
                                gCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGAc                                                         <  2:5210743/93‑1 (MQ=255)
                                   tCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCa                                                      >  2:5909663/1‑93 (MQ=255)
                                   tCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCa                                                      >  1:2036664/1‑93 (MQ=255)
                                      gACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGAc                                                   <  2:251173/93‑1 (MQ=255)
                                        ccGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCt                                                 <  2:3290446/93‑1 (MQ=255)
                                            tAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGctt                                             >  1:4002732/1‑93 (MQ=255)
                                            tAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGctt                                             >  1:2190639/1‑93 (MQ=255)
                                            tAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGctt                                             >  2:2844911/1‑93 (MQ=255)
                                             aaaCTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGcttc                                            <  2:199321/93‑1 (MQ=255)
                                             aaaCTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGcttc                                            <  2:1451399/93‑1 (MQ=255)
                                              aaCTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGcttct                                           >  2:6980919/1‑93 (MQ=255)
                                               aCTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCCGcttctt                                          >  1:68608/1‑93 (MQ=255)
                                                ctctGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCttcttc                                         <  1:2243145/93‑1 (MQ=255)
                                                ctctGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCttcttc                                         <  2:7168989/93‑1 (MQ=255)
                                                 tctGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTtcttct                                        >  2:4174040/1‑93 (MQ=255)
                                                   tGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTctac                                      >  2:17463/1‑93 (MQ=255)
                                                   tGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTctac                                      <  2:7410038/93‑1 (MQ=255)
                                                    ggATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTctact                                     >  2:1900580/1‑93 (MQ=255)
                                                      aTCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCtactac                                   <  2:105521/93‑1 (MQ=255)
                                                        cggcggCAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGt                                 >  1:3000829/1‑93 (MQ=255)
                                                         ggcggcAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGtt                                <  2:5457492/93‑1 (MQ=255)
                                                          gcggcAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTg                               >  2:7245185/1‑93 (MQ=255)
                                                           cggcAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGc                              <  2:6523882/93‑1 (MQ=255)
                                                             gcAGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGccc                            <  2:4153168/93‑1 (MQ=255)
                                                               aGAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAg                          >  2:2158557/1‑93 (MQ=255)
                                                                gAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGa                         >  1:3488584/1‑93 (MQ=255)
                                                                gAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGa                         >  1:3987964/1‑93 (MQ=255)
                                                                gAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGa                         >  2:5956506/1‑93 (MQ=255)
                                                                gAAGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGa                         >  1:2318687/1‑93 (MQ=255)
                                                                  aGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAat                       >  2:2493730/1‑93 (MQ=255)
                                                                  aGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAat                       >  2:7364688/1‑93 (MQ=255)
                                                                  aGGAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAat                       <  1:6952014/93‑1 (MQ=255)
                                                                   ggAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAata                      <  1:72960/93‑1 (MQ=255)
                                                                    gAGTTAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAatat                     >  1:4742469/1‑93 (MQ=255)
                                                                       ttAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCa                  >  1:1387784/1‑93 (MQ=255)
                                                                       nnaaGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCa                  <  2:3460952/91‑1 (MQ=255)
                                                                        tAAGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCAt                 >  2:6094279/1‑93 (MQ=255)
                                                                        tAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCAt                 >  1:719115/1‑93 (MQ=255)
                                                                         aaGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCAtt                <  2:4662196/93‑1 (MQ=255)
                                                                         aaGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCAtt                <  1:3321846/93‑1 (MQ=255)
                                                                          aGGAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTg               <  2:4899264/93‑1 (MQ=255)
                                                                           ggAACCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGc              <  1:6107507/93‑1 (MQ=255)
                                                                            gAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCa             <  1:4433775/93‑1 (MQ=255)
                                                                              aCCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCaaa           <  2:1138897/93‑1 (MQ=255)
                                                                              aCCGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCaaa           <  2:7470636/93‑1 (MQ=255)
                                                                               ccGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAAt          <  1:1352703/93‑1 (MQ=255)
                                                                                cGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATa         <  1:1769455/93‑1 (MQ=255)
                                                                                cGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATa         >  1:3859518/1‑93 (MQ=255)
                                                                                cGAGAACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATa         <  1:7012585/93‑1 (MQ=255)
                                                                                 gagaACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATAc        >  1:1983437/1‑93 (MQ=255)
                                                                                  agaACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATAcc       <  1:4349541/93‑1 (MQ=255)
                                                                                  agaACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATAcc       <  2:6286290/93‑1 (MQ=255)
                                                                                  agaACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATAcc       <  1:782988/93‑1 (MQ=255)
                                                                                  agaACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATAcc       <  1:895548/93‑1 (MQ=255)
                                                                                   gaACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCg      >  2:6865808/1‑93 (MQ=255)
                                                                                   gaACAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCg      >  2:3950533/1‑93 (MQ=255)
                                                                                    aaCAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGa     <  1:4666426/93‑1 (MQ=255)
                                                                                    aaCAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGa     <  2:5490660/93‑1 (MQ=255)
                                                                                    aaCAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGa     <  2:4569682/93‑1 (MQ=255)
                                                                                    aaCAGGGACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGa     <  1:6817218/93‑1 (MQ=255)
                                                                                     aCAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAg    <  1:4169381/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGGAGCGCCATCTTCATCGACCATGGTCAGGAGCATCTGACCGATAAACTCTGGATCGGCGGCAGAAGGAGTTAAGGAACCGAGAACAGGAACACAGGTACGATCCGGCTCGCCCATTTCCTGACCCAGACCTGCTTCTTCTACTACGTTGCCCAGAATATCCATTGCAAATACCGAGGC  >  NC_000913/1358540‑1358719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: