Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,391,027 A→G intergenic (+113/‑203) ycjZ → / → b1329 putative transcriptional regulator LYSR‑type/putative transport periplasmic protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,391,0270AG87.1% 637.6 / 75.6 255intergenic (+113/‑203)ycjZ/b1329putative transcriptional regulator LYSR‑type/putative transport periplasmic protein
Reads supporting (aligned to +/- strand):  ref base A (16/17);  new base G (118/104);  total (134/121)
Fisher's exact test for biased strand distribution p-value = 7.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.42e-01

Only 100 of 257 total aligned reads displayed.

TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAA  >  NC_000913/1390937‑1391118
                                                                                          |                                                                                           
ttaattCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGcc                                                                                           <  1:4599796/93‑1 (MQ=255)
 taattCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCg                                                                                          <  2:788961/93‑1 (MQ=255)
  aattCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGa                                                                                         >  2:6177764/1‑93 (MQ=255)
   attCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGaa                                                                                        >  1:6045406/1‑93 (MQ=255)
    ttcttcTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaaa                                                                                       >  2:2416661/1‑93 (MQ=255)
    ttcttcTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaaa                                                                                       >  1:3029959/1‑93 (MQ=255)
    ttcttcTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaaa                                                                                       >  2:323912/1‑93 (MQ=255)
    ttcttcTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGaaa                                                                                       >  2:501961/1‑93 (MQ=255)
     tcttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaaaa                                                                                      >  1:583197/1‑93 (MQ=255)
     tcttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGaaaa                                                                                      <  1:5299449/93‑1 (MQ=255)
      cttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAAc                                                                                     <  2:267349/93‑1 (MQ=255)
      cttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAAc                                                                                     <  2:7078713/93‑1 (MQ=255)
      cttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAAc                                                                                     >  2:7440427/1‑93 (MQ=255)
       ttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACg                                                                                    >  1:883618/1‑93 (MQ=255)
        tctcTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACgg                                                                                   <  1:3781167/93‑1 (MQ=255)
           ctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGtt                                                                                <  1:3197381/93‑1 (MQ=255)
           ctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGtt                                                                                <  2:2002443/93‑1 (MQ=255)
            ttAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGttt                                                                               >  1:5606265/1‑93 (MQ=255)
                 gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACg                                                                          >  1:6318087/1‑93 (MQ=255)
                   aTTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTg                                                                        >  2:4407925/1‑93 (MQ=255)
                    ttCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGc                                                                       >  1:1296831/1‑93 (MQ=255)
                    ttCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGc                                                                       >  1:4494172/1‑93 (MQ=255)
                       tcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa                                                                    <  2:402005/93‑1 (MQ=255)
                        cAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAg                                                                   >  1:5915683/1‑93 (MQ=255)
                         aGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGc                                                                  >  1:6964214/1‑93 (MQ=255)
                          gTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGcc                                                                 >  1:6476197/1‑93 (MQ=255)
                           ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                                >  1:1674648/1‑93 (MQ=255)
                           ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                                <  2:1187202/93‑1 (MQ=255)
                           ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                                >  1:7437467/1‑93 (MQ=255)
                           ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc                                                                >  1:1557607/1‑93 (MQ=255)
                            tCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCg                                                               >  2:6607003/1‑93 (MQ=255)
                              cTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGaa                                                             >  2:4695543/1‑93 (MQ=255)
                              cTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGaa                                                             >  1:2211389/1‑93 (MQ=255)
                               tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc                                                            >  1:4912121/1‑93 (MQ=255)
                               tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc                                                            >  1:1838873/1‑93 (MQ=255)
                                  cAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTa                                                         <  1:2674479/93‑1 (MQ=255)
                                   aaCGTTTTGGTCATTTTTTATTCTTCGTGCAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAg                                                        <  2:5747512/93‑1 (MQ=255)
                                   aaCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAg                                                        <  1:2497033/93‑1 (MQ=255)
                                   aaCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAg                                                        <  2:1482765/93‑1 (MQ=255)
                                   aaCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAg                                                        <  2:5580357/93‑1 (MQ=255)
                                    aCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgt                                                       >  2:4251717/1‑93 (MQ=255)
                                    aCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGGAgt                                                       >  1:6169562/1‑93 (MQ=255)
                                    aCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgt                                                       <  2:2721705/93‑1 (MQ=255)
                                     cGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgtg                                                      >  1:3831518/1‑93 (MQ=255)
                                     cGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgtg                                                      >  2:7262896/1‑93 (MQ=255)
                                      gTTTTGGTCGTTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgtgt                                                     <  2:1634863/93‑1 (MQ=255)
                                      gTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgtgt                                                     <  1:3107891/93‑1 (MQ=255)
                                       ttttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGtt                                                    <  1:6120620/93‑1 (MQ=255)
                                       ttttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGtt                                                    >  2:4763710/1‑93 (MQ=255)
                                       ttttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGtt                                                    >  2:2987065/1‑93 (MQ=255)
                                       ttttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGtt                                                    >  1:13351/1‑93 (MQ=255)
                                        tttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTc                                                   >  1:6364957/1‑93 (MQ=255)
                                              cATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGtt                                             >  2:6276751/1‑93 (MQ=255)
                                               aTTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTc                                            >  2:2555962/1‑93 (MQ=255)
                                               aTTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTc                                            >  1:5266791/1‑93 (MQ=255)
                                                  ttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAt                                         >  1:3653300/1‑93 (MQ=255)
                                                    ttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtgt                                       >  1:7175560/1‑93 (MQ=255)
                                                    ttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtgt                                       <  1:1929597/93‑1 (MQ=255)
                                                    ttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtgt                                       >  2:4195466/1‑93 (MQ=255)
                                                    ttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtgt                                       >  2:7257886/1‑93 (MQ=255)
                                                      aTTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGc                                     >  1:3569613/1‑93 (MQ=255)
                                                      aTTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGc                                     >  2:1588732/1‑93 (MQ=255)
                                                      aTTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGc                                     >  2:2887186/1‑93 (MQ=255)
                                                      aTTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGc                                     <  1:995749/93‑1 (MQ=255)
                                                      aTTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGc                                     >  2:5318129/1‑93 (MQ=255)
                                                        tcttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCtt                                   <  1:6205827/93‑1 (MQ=255)
                                                         cttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCttt                                  >  2:3965545/1‑93 (MQ=255)
                                                          ttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTa                                 <  2:4624303/93‑1 (MQ=255)
                                                          ttcGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTa                                 >  2:2277418/1‑93 (MQ=255)
                                                          ttcGTACAATGGCCACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTa                                 >  2:1333980/1‑93 (MQ=255)
                                                             gTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCg                              >  1:1100393/1‑93 (MQ=255)
                                                              tACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGc                             <  2:6923256/93‑1 (MQ=255)
                                                              tACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGc                             >  1:2931737/1‑93 (MQ=255)
                                                               aCAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCa                            >  1:5651407/1‑93 (MQ=255)
                                                                cAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAt                           <  1:5495132/93‑1 (MQ=255)
                                                                cAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAt                           <  1:3562991/93‑1 (MQ=255)
                                                                  aTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAttt                         >  1:5564319/1‑93 (MQ=255)
                                                                  aTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAttt                         <  2:4539315/93‑1 (MQ=255)
                                                                   tGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAtttt                        <  2:384572/93‑1 (MQ=255)
                                                                    ggCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTg                       <  2:5045785/93‑1 (MQ=255)
                                                                    ggCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTg                       <  1:7096896/93‑1 (MQ=255)
                                                                     gCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTgg                      >  2:3364118/1‑93 (MQ=255)
                                                                      cGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGga                     >  1:1021040/1‑93 (MQ=255)
                                                                      cGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGga                     <  1:5760132/93‑1 (MQ=255)
                                                                           gATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACta                >  1:2088851/1‑93 (MQ=255)
                                                                            aTGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtat               <  2:1685700/93‑1 (MQ=255)
                                                                                tGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTattatt           <  1:3322939/93‑1 (MQ=255)
                                                                                 gATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAttt          <  2:953607/93‑1 (MQ=255)
                                                                                  aTTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTa         >  1:4248171/1‑93 (MQ=255)
                                                                                   ttATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTac        >  1:6484025/1‑93 (MQ=255)
                                                                                    tATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTaca       <  1:5591882/93‑1 (MQ=255)
                                                                                    tATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTaca       <  1:4786918/93‑1 (MQ=255)
                                                                                    tATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTaca       <  1:3909353/93‑1 (MQ=255)
                                                                                     atgatgCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTacac      <  2:5863455/93‑1 (MQ=255)
                                                                                     atgatgCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTacac      <  1:509760/93‑1 (MQ=255)
                                                                                      tGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACt     <  2:524256/93‑1 (MQ=255)
                                                                                       gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa    <  1:6610689/93‑1 (MQ=255)
                                                                                       gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa    <  1:2307772/93‑1 (MQ=255)
                                                                                       gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa    >  1:761109/1‑93 (MQ=255)
                                                                                         tACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTaaa  <  2:195845/93‑1 (MQ=255)
                                                                                          |                                                                                           
TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAA  >  NC_000913/1390937‑1391118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: