Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,658,150 A→G P686P (CCA→CCG b1587 → putative oxidoreductase major subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,658,1500AG77.2% 480.1 / 170.8 272P686P (CCA→CCGb1587putative oxidoreductase major subunit
Reads supporting (aligned to +/- strand):  ref base A (30/32);  new base G (109/101);  total (139/133)
Fisher's exact test for biased strand distribution p-value = 6.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.55e-01

Only 100 of 272 total aligned reads displayed.

GGAACTGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCAGGAGGTG  >  NC_000913/1658060‑1658240
                                                                                          |                                                                                          
ggAACTGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACt                                                                                          <  1:174246/93‑1 (MQ=255)
    cTGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCaa                                                                                      <  2:5737427/93‑1 (MQ=255)
    cTGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCaa                                                                                      >  2:1496375/1‑93 (MQ=255)
     tGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAAc                                                                                     >  1:1512032/1‑93 (MQ=255)
     tGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAAc                                                                                     <  2:1217718/93‑1 (MQ=255)
     tGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAAc                                                                                     >  1:3720907/1‑93 (MQ=255)
      ggAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACt                                                                                    <  1:1386946/93‑1 (MQ=255)
          aaaGATGAAGTGATAAGCCCATTTCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGttt                                                                                <  2:6972919/93‑1 (MQ=255)
          aaaGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGttt                                                                                <  2:7443814/93‑1 (MQ=255)
           aaGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTg                                                                               <  1:889837/93‑1 (MQ=255)
           aaGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTg                                                                               <  2:5605280/93‑1 (MQ=255)
            aGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTgg                                                                              >  1:4227785/1‑93 (MQ=255)
              aTGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGtt                                                                            <  1:2083570/93‑1 (MQ=255)
              aTGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGtt                                                                            <  2:3594872/93‑1 (MQ=255)
               tGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGttt                                                                           >  2:1053923/1‑93 (MQ=255)
                gAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTc                                                                          <  2:5585999/93‑1 (MQ=255)
                gAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTc                                                                          <  1:2033305/93‑1 (MQ=255)
                 aaGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTcc                                                                         >  2:1595766/1‑93 (MQ=255)
                 aaGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTcc                                                                         >  1:666264/1‑93 (MQ=255)
                  aGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCa                                                                        <  2:2089217/93‑1 (MQ=255)
                    tGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCAtt                                                                      >  1:3845545/1‑93 (MQ=255)
                    tGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCAtt                                                                      >  1:6341209/1‑93 (MQ=255)
                     gATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTa                                                                     >  2:126122/1‑93 (MQ=255)
                     gATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTa                                                                     <  1:6089816/93‑1 (MQ=255)
                     gATAACCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTa                                                                     <  2:4847080/93‑1 (MQ=255)
                      aTAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTAc                                                                    >  2:6517472/1‑93 (MQ=255)
                       tAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACa                                                                   <  2:3816525/93‑1 (MQ=255)
                       tAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACa                                                                   <  2:4980937/93‑1 (MQ=255)
                        aaGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACaa                                                                  >  2:3440028/1‑93 (MQ=255)
                          gCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAAt                                                                <  1:602976/93‑1 (MQ=255)
                          gCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAAt                                                                >  1:1167347/1‑93 (MQ=255)
                          gCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAAt                                                                <  2:3781605/93‑1 (MQ=255)
                           cccATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATc                                                               >  2:1086451/1‑93 (MQ=255)
                            ccATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATcc                                                              <  2:7212061/93‑1 (MQ=255)
                            ccATTGCCAGTTTATGCCTCAACCTGTGAAGGCTGGATCTCCCCTGAGCGTAGAGCCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATcc                                                              <  2:6745161/93‑1 (MQ=255)
                             cATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATccc                                                             >  1:3446225/1‑93 (MQ=255)
                             cATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATccc                                                             <  1:3509924/93‑1 (MQ=255)
                              aTTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCg                                                            >  1:3233228/1‑93 (MQ=255)
                                 gCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTac                                                         >  2:1753800/1‑93 (MQ=255)
                                  ccAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTact                                                        <  2:6687723/93‑1 (MQ=255)
                                  ccAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTact                                                        >  2:1383541/1‑93 (MQ=255)
                                  ccAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTact                                                        <  2:2776764/93‑1 (MQ=255)
                                   cAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTactc                                                       >  1:5805048/1‑93 (MQ=255)
                                   cAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTactc                                                       >  2:3578726/1‑93 (MQ=255)
                                   cAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTactc                                                       >  1:5139488/1‑93 (MQ=255)
                                    aGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTactca                                                      >  2:19091/1‑93 (MQ=255)
                                     gTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTactcac                                                     <  2:6507965/93‑1 (MQ=255)
                                      tttATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTactcact                                                    >  2:5889034/1‑93 (MQ=255)
                                       ttATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTactcactc                                                   <  1:498885/93‑1 (MQ=255)
                                       ttATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTactcactc                                                   <  1:695507/93‑1 (MQ=255)
                                        tATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCg                                                  >  2:4225400/1‑93 (MQ=255)
                                          tGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGAc                                                >  1:783273/1‑93 (MQ=255)
                                            ccTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCt                                              <  1:6436988/93‑1 (MQ=255)
                                             cTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTa                                             >  2:6216120/1‑93 (MQ=255)
                                              tCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTAc                                            >  1:5520751/1‑93 (MQ=255)
                                              tCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTAc                                            <  1:4167858/93‑1 (MQ=255)
                                              tCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTAc                                            >  2:4301909/1‑93 (MQ=255)
                                                aaCCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACgg                                          >  1:1042392/1‑93 (MQ=255)
                                                 aCCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGc                                         >  2:2353403/1‑93 (MQ=255)
                                                 aCCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGc                                         <  1:3388574/93‑1 (MQ=255)
                                                 aCCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGc                                         <  2:483408/93‑1 (MQ=255)
                                                   cTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCaa                                       <  2:3007721/93‑1 (MQ=255)
                                                   cTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCaa                                       <  1:6399322/93‑1 (MQ=255)
                                                    tttGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAat                                      >  1:2466978/1‑93 (MQ=255)
                                                    tttGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAat                                      >  2:3496388/1‑93 (MQ=255)
                                                     ttGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGAGCTACGGCAata                                     <  2:2803755/93‑1 (MQ=255)
                                                     ttGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAata                                     <  2:639177/93‑1 (MQ=255)
                                                      tGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAatat                                    <  2:4009633/93‑1 (MQ=255)
                                                         aGGCTGGAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGa                                 <  2:2188902/93‑1 (MQ=255)
                                                         aGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTAACTCCACCTACGGCAATATTGa                                 >  1:2877342/1‑93 (MQ=255)
                                                            cTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTATGGCAATATTGAtct                              <  2:6441033/93‑1 (MQ=255)
                                                             tGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGAtctc                             >  2:1997246/1‑93 (MQ=255)
                                                              ggAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTcc                            <  1:5442078/93‑1 (MQ=255)
                                                              ggAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTcc                            <  2:4518487/93‑1 (MQ=255)
                                                              ggAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTcc                            <  2:4541302/93‑1 (MQ=255)
                                                               gAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCt                           <  1:6240555/93‑1 (MQ=255)
                                                               gAACTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCt                           <  1:2620174/93‑1 (MQ=255)
                                                                 aCTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGa                         <  2:3993853/93‑1 (MQ=255)
                                                                 aCTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGa                         >  1:7500496/1‑93 (MQ=255)
                                                                  cTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGaa                        <  1:439751/93‑1 (MQ=255)
                                                                  cTCCCCTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGaa                        >  2:6880782/1‑93 (MQ=255)
                                                                    ccccTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAgg                      >  2:3359520/1‑93 (MQ=255)
                                                                     cccTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGc                     <  1:1238457/93‑1 (MQ=255)
                                                                     cccTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGc                     >  1:5237815/1‑93 (MQ=255)
                                                                      ccTGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGct                    >  2:3676441/1‑93 (MQ=255)
                                                                        tGAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGctgc                  >  2:5259545/1‑93 (MQ=255)
                                                                        tGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGctgc                  <  2:2446224/93‑1 (MQ=255)
                                                                         gAACGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACCCGACCTACGGCAATATTGATCTCCTGAAGGctgcc                 >  1:7141354/1‑93 (MQ=255)
                                                                            cGTAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGctgcctgc              <  1:3112877/93‑1 (MQ=255)
                                                                             gTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCtgcctgcc             >  2:7151684/1‑93 (MQ=255)
                                                                             gTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCtgcctgcc             <  1:1935075/93‑1 (MQ=255)
                                                                              tAGAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCg            >  1:5732793/1‑93 (MQ=255)
                                                                               aGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGt           >  1:4474034/1‑93 (MQ=255)
                                                                                gAACCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTc          >  2:2560431/1‑93 (MQ=255)
                                                                                  aCCTTCCCGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCag        >  1:2227068/1‑93 (MQ=255)
                                                                                   ccTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCagg       >  1:7276410/1‑93 (MQ=255)
                                                                                     ttCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCaggag     >  2:7237940/1‑93 (MQ=255)
                                                                                       cccGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCaggagg  >  1:2420926/1‑92 (MQ=255)
                                                                                       cccGCTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCAGGAGgt   >  2:761911/1‑93 (MQ=255)
                                                                                        ccACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCAGGAGgtg  <  2:479957/93‑1 (MQ=255)
                                                                                          |                                                                                          
GGAACTGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCAGGAGGTG  >  NC_000913/1658060‑1658240

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: