Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,666,596 T→C intergenic (‑8/+127) mlc ← / ← ynfL putative NAGC‑like transcriptional regulator/putative transcriptional regulator LYSR‑type

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,666,5960TC86.1% 566.2 / 81.4 237intergenic (‑8/+127)mlc/ynfLputative NAGC‑like transcriptional regulator/putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand):  ref base T (21/12);  new base C (99/105);  total (120/117)
Fisher's exact test for biased strand distribution p-value = 1.34e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.19e-01

Only 100 of 240 total aligned reads displayed.

AAGCTGATCAATCAGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACA  >  NC_000913/1666505‑1666688
                                                                                           |                                                                                            
 aGCTGATCAATCAGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATAcccc                                                                                            >  1:2562654/1‑93 (MQ=255)
 aGCTGATCAATCAGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATAcccc                                                                                            <  1:6867378/93‑1 (MQ=255)
   cTGATCAATCAGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCt                                                                                          <  2:4519806/93‑1 (MQ=255)
     gATCAATCAGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCtat                                                                                        >  1:3543555/1‑93 (MQ=255)
     gATCAATCAGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCtat                                                                                        >  1:6861416/1‑93 (MQ=255)
        caatcaGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATAtt                                                                                     <  2:1948686/93‑1 (MQ=255)
        caatcaGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATAtt                                                                                     >  1:6591567/1‑93 (MQ=255)
        caatcaGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATAtt                                                                                     <  1:4454220/93‑1 (MQ=255)
         aatcaGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATAttt                                                                                    >  2:5331750/1‑93 (MQ=255)
         aatcaGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATAttt                                                                                    >  1:4330294/1‑93 (MQ=255)
             aGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTcgc                                                                                >  2:1976204/1‑93 (MQ=255)
                 gATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTc                                                                            >  2:4805097/1‑93 (MQ=255)
                  aTAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTcc                                                                           >  2:878991/1‑93 (MQ=255)
                      aCCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGaaa                                                                       <  1:5242398/93‑1 (MQ=255)
                       ccGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAaat                                                                      >  2:3695941/1‑93 (MQ=255)
                       ccGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAaat                                                                      <  1:4393546/93‑1 (MQ=255)
                       ccGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAaat                                                                      <  2:1472668/93‑1 (MQ=255)
                         gcgcCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAaataa                                                                    <  2:4847576/93‑1 (MQ=255)
                           gcCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATc                                                                  <  1:6113941/93‑1 (MQ=255)
                           gcCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATc                                                                  >  2:1037496/1‑93 (MQ=255)
                           gcCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATc                                                                  <  1:5056724/93‑1 (MQ=255)
                            cccGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCt                                                                 <  2:1219530/93‑1 (MQ=255)
                            cccGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCt                                                                 >  2:2897447/1‑93 (MQ=255)
                             ccGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTg                                                                <  2:6631308/93‑1 (MQ=255)
                               gcgTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTa                                                              <  2:3863125/93‑1 (MQ=255)
                               gcgTTGGTCTGCTTTATATGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTa                                                              <  2:4321016/93‑1 (MQ=255)
                                cgTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAg                                                             >  2:645510/1‑93 (MQ=255)
                                cgTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAg                                                             <  1:3025928/93‑1 (MQ=255)
                                cgTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAg                                                             <  1:425970/93‑1 (MQ=255)
                                 gTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAgg                                                            <  2:1629733/93‑1 (MQ=255)
                                 gTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAgg                                                            <  1:1559614/93‑1 (MQ=255)
                                  ttGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGc                                                           <  2:6812652/93‑1 (MQ=255)
                                  ttGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGc                                                           <  2:17468/93‑1 (MQ=255)
                                   tGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCt                                                          <  2:5918153/93‑1 (MQ=255)
                                    ggTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTa                                                         >  2:6280744/1‑93 (MQ=255)
                                     gTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTAt                                                        >  2:3745078/1‑93 (MQ=255)
                                     gTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTAt                                                        >  1:6083550/1‑93 (MQ=255)
                                      tCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATg                                                       <  2:2744644/93‑1 (MQ=255)
                                      tCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATg                                                       >  2:6859865/1‑93 (MQ=255)
                                      tCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATg                                                       <  1:890563/93‑1 (MQ=255)
                                        tGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGt                                                     >  2:1957839/1‑93 (MQ=255)
                                         gCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTg                                                    <  1:1012779/93‑1 (MQ=255)
                                          cTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGa                                                   >  1:5804453/1‑93 (MQ=255)
                                           tttATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGaa                                                  >  2:2652256/1‑93 (MQ=255)
                                             tATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGc                                                >  1:6007967/1‑93 (MQ=255)
                                             tATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGc                                                >  2:6087081/1‑93 (MQ=255)
                                             tATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGc                                                <  2:5679228/93‑1 (MQ=255)
                                              aTTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCa                                               <  2:3294189/93‑1 (MQ=255)
                                               tttGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCAc                                              <  2:4636629/93‑1 (MQ=255)
                                               tttGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCAc                                              >  2:6124582/1‑93 (MQ=255)
                                               tttGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCAc                                              <  2:5148691/93‑1 (MQ=255)
                                                  gATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTc                                           <  2:7085307/93‑1 (MQ=255)
                                                   aTCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCa                                          >  1:2946955/1‑93 (MQ=255)
                                                   aTCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCa                                          <  1:5880214/93‑1 (MQ=255)
                                                    tCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCaa                                         >  1:4848385/1‑93 (MQ=255)
                                                    tCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCaa                                         >  2:5045802/1‑93 (MQ=255)
                                                    tCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCaa                                         >  1:3371687/1‑93 (MQ=255)
                                                    tCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCaa                                         >  1:3249886/1‑93 (MQ=255)
                                                      aaTGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATa                                       <  1:1963957/93‑1 (MQ=255)
                                                       aTGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATAc                                      <  2:1511542/93‑1 (MQ=255)
                                                       aTGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATAc                                      <  1:6707798/93‑1 (MQ=255)
                                                       aTGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATAc                                      >  2:728559/1‑93 (MQ=255)
                                                        tgtgCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAATCACTTCAATACg                                     <  1:7059669/93‑1 (MQ=255)
                                                        tgtgCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACg                                     <  1:862737/93‑1 (MQ=255)
                                                          tgCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACgtg                                   <  2:2792870/93‑1 (MQ=255)
                                                           gCCCAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACgtgt                                  <  1:5174086/93‑1 (MQ=255)
                                                             ccAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTgtcg                                >  2:2957449/1‑93 (MQ=255)
                                                             ccAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTgtcg                                >  2:4403565/1‑93 (MQ=255)
                                                              cAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTgtcgt                               >  1:3180004/1‑93 (MQ=255)
                                                              cAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTgtcgt                               <  2:764780/93‑1 (MQ=255)
                                                              cAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTgtcgt                               >  1:5380199/1‑93 (MQ=255)
                                                              cAGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTgtcgt                               >  2:4015937/1‑93 (MQ=255)
                                                               aGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCGCTTCAATACGTgtcgtc                              >  2:4009449/1‑93 (MQ=255)
                                                               aGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTgtcgtc                              >  1:7474462/1‑93 (MQ=255)
                                                               aGGCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTgtcgtc                              <  2:3177995/93‑1 (MQ=255)
                                                                ggCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCa                             >  2:4178388/1‑93 (MQ=255)
                                                                 gCTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCaa                            >  2:1113703/1‑93 (MQ=255)
                                                                  cTGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCaaa                           <  2:3381765/93‑1 (MQ=255)
                                                                   tGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAAt                          >  1:244594/1‑93 (MQ=255)
                                                                   tGGTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAAt                          <  2:1784155/93‑1 (MQ=255)
                                                                    ggTTTTCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAAtt                         >  1:3639748/1‑93 (MQ=255)
                                                                       tttCAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAAttttt                      >  1:4078057/1‑93 (MQ=255)
                                                                          cAGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACt                   <  1:2639176/93‑1 (MQ=255)
                                                                           aGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACtt                  <  1:409104/93‑1 (MQ=255)
                                                                           aGCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACtt                  >  1:2302650/1‑93 (MQ=255)
                                                                            gCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTa                 <  1:1826373/93‑1 (MQ=255)
                                                                            gCAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTa                 >  2:5467432/1‑93 (MQ=255)
                                                                            gCAACCACCGCATACCACCTATATATTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTa                 >  2:7362781/1‑93 (MQ=255)
                                                                             cAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAg                <  2:6697574/93‑1 (MQ=255)
                                                                             cAACCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAg                <  2:2169227/93‑1 (MQ=255)
                                                                              aaCCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAgg               >  1:2225877/1‑93 (MQ=255)
                                                                              aaCCACCGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAgg               >  1:1543556/1‑93 (MQ=255)
                                                                                ccaccGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCa             <  2:2339876/93‑1 (MQ=255)
                                                                                  accGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCAtg           >  1:7293786/1‑93 (MQ=255)
                                                                                  accGCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCAtg           >  1:1059529/1‑93 (MQ=255)
                                                                                   ccGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCAtgt          >  1:1222741/1‑93 (MQ=255)
                                                                                     gCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCGCTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGa        <  1:1801111/93‑1 (MQ=255)
                                                                                     gCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCGCTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGa        <  1:3328087/93‑1 (MQ=255)
                                                                                     gCATACCCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGa        <  2:62547/93‑1 (MQ=255)
                                                                                           tCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACa  <  1:4633663/93‑1 (MQ=255)
                                                                                           |                                                                                            
AAGCTGATCAATCAGGCGATAAACCGCGCCCGCGTTGGTCTGCTTTATTTGATCAATGTGCCCAGGCTGGTTTTCAGCAACCACCGCATACTCCCTATATTTTCGCGCTCCGAAATAATCTGTAGGCTATGGTGAAGCACTTCAATACGTGTCGTCAAATTTTTACTTAGGCATGTGATTAACA  >  NC_000913/1666505‑1666688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: