BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,672,622	T→C	L229P (CTG→CCG)	b1601 →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,672,622	0	T	C	100.0%	861.1 / NA	253	L229P (CTG→CCG)	b1601	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (142/111); total (142/111)

Only 100 of 253 total aligned reads displayed.

TGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCT  >  NC_000913/1672532‑1672711

tGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCgg                                                                                         >  1:5290875/1‑93 (MQ=255)

tGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCgg                                                                                         >  2:2448768/1‑93 (MQ=255)

 gAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGc                                                                                        >  2:7422612/1‑93 (MQ=255)

    aaCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCtt                                                                                     >  2:4636777/1‑93 (MQ=255)

     aCAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCttt                                                                                    >  2:27864/1‑93 (MQ=255)

      cAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTg                                                                                   <  2:1006238/93‑1 (MQ=255)

       aGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTgc                                                                                  <  1:6811569/93‑1 (MQ=255)

        gCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTgcg                                                                                 <  1:562786/93‑1 (MQ=255)

        gCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTgcg                                                                                 >  2:6534937/1‑93 (MQ=255)

        gCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTgcg                                                                                 >  2:6283376/1‑93 (MQ=255)

         ccATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTgcgc                                                                                <  1:3210131/93‑1 (MQ=255)

          cATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCt                                                                               >  2:3215838/1‑93 (MQ=255)

           aTCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCtt                                                                              >  2:2824037/1‑93 (MQ=255)

            tCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGGTTGCCGGCCTTTGCGCTTa                                                                             >  1:6777941/1‑93 (MQ=255)

            tCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTa                                                                             >  2:4022978/1‑93 (MQ=255)

             cAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTaa                                                                            <  2:712035/93‑1 (MQ=255)

              aGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAt                                                                           >  1:1786855/1‑93 (MQ=255)

              aGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAt                                                                           <  1:3384363/93‑1 (MQ=255)

               gCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAtt                                                                          >  1:6312301/1‑93 (MQ=255)

               gCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAtt                                                                          >  2:1570935/1‑93 (MQ=255)

               gCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAAtt                                                                          >  2:3755718/1‑93 (MQ=255)

                catcatCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTa                                                                         >  2:3417563/1‑93 (MQ=255)

                 atcatcACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTAc                                                                        <  1:1102452/93‑1 (MQ=255)

                 atcatcACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTAc                                                                        >  1:418685/1‑93 (MQ=255)

                 atcatcACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTAc                                                                        <  2:7435664/93‑1 (MQ=255)

                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       <  1:189450/93‑1 (MQ=255)

                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       >  2:920269/1‑93 (MQ=255)

                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       <  1:5478703/93‑1 (MQ=255)

                  tcatcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       >  2:5567066/1‑93 (MQ=255)

                  tcatcaCCGGCCTGGTCGCCTGGGAGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACa                                                                       >  2:7358561/1‑93 (MQ=255)

                    atcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATc                                                                     <  2:1998746/93‑1 (MQ=255)

                     tcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATcc                                                                    <  2:5066233/93‑1 (MQ=255)

                     tcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATcc                                                                    >  2:5035116/1‑93 (MQ=255)

                     tcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATcc                                                                    >  1:5798177/1‑93 (MQ=255)

                     tcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATcc                                                                    <  1:1355467/93‑1 (MQ=255)

                     tcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATcc                                                                    >  2:405592/1‑93 (MQ=255)

                     tcaCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATcc                                                                    <  1:3980434/93‑1 (MQ=255)

                       aCCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCg                                                                  <  2:1217485/93‑1 (MQ=255)

                         cGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGaa                                                                <  2:276829/93‑1 (MQ=255)

                           gCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAata                                                              <  1:7297429/93‑1 (MQ=255)

                           gCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAata                                                              >  1:2721747/1‑93 (MQ=255)

                            ccTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAatat                                                             <  1:3525656/93‑1 (MQ=255)

                             cTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATAtt                                                            <  2:5471188/93‑1 (MQ=255)

                              tGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTg                                                           >  2:4423916/1‑93 (MQ=255)

                              tGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTg                                                           >  1:5538311/1‑93 (MQ=255)

                              tGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTg                                                           >  1:3907042/1‑93 (MQ=255)

                              tGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTg                                                           >  2:220664/1‑93 (MQ=255)

                               ggTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTgg                                                          <  2:6008429/93‑1 (MQ=255)

                                 tCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGtt                                                        >  2:5819206/1‑93 (MQ=255)

                                  cGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTc                                                       <  1:37935/93‑1 (MQ=255)

                                   gCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCa                                                      >  1:2264500/1‑93 (MQ=255)

                                      tGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTc                                                   >  1:6144364/1‑93 (MQ=255)

                                        ggCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCt                                                 <  1:6958751/93‑1 (MQ=255)

                                        ggCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCt                                                 >  1:6515558/1‑93 (MQ=255)

                                           gATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgc                                              <  1:2914908/93‑1 (MQ=255)

                                           gATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgc                                              >  2:3005550/1‑93 (MQ=255)

                                            aTGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgcg                                             <  2:3796429/93‑1 (MQ=255)

                                            aTGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTcgcg                                             >  1:1163085/1‑93 (MQ=255)

                                              gCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGc                                           <  2:3862691/93‑1 (MQ=255)

                                                tCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCaa                                         <  2:5956211/93‑1 (MQ=255)

                                                  gccgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATc                                       <  2:1731457/93‑1 (MQ=255)

                                                    cgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATccc                                     <  2:4445252/93‑1 (MQ=255)

                                                    cgcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATccc                                     >  2:2747168/1‑93 (MQ=255)

                                                     gcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccc                                    >  2:6633548/1‑93 (MQ=255)

                                                     gcACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccc                                    <  2:1899850/93‑1 (MQ=255)

                                                      cACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATccccc                                   <  1:3648853/93‑1 (MQ=255)

                                                      cACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATccccc                                   <  2:3585835/93‑1 (MQ=255)

                                                       aCTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATcccccc                                  <  1:83425/93‑1 (MQ=255)

                                                        cTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCt                                 >  1:1782125/1‑93 (MQ=255)

                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                <  2:6764161/93‑1 (MQ=255)

                                                         tCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTa                                <  1:4896524/93‑1 (MQ=255)

                                                          cGATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTAt                               >  1:1834425/1‑93 (MQ=255)

                                                           gATGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATc                              <  2:6506960/93‑1 (MQ=255)

                                                            aTGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCg                             >  1:1640073/1‑93 (MQ=255)

                                                             tGTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGc                            >  1:2549495/1‑93 (MQ=255)

                                                             nnttcgcttcgcTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGc                            <  2:2576579/91‑1 (MQ=255)

                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           >  2:6345976/1‑93 (MQ=255)

                                                              gTTCGCTTCGCTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCt                           >  2:5430047/1‑93 (MQ=255)

                                                               ttcgcttcgcTTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTc                          >  2:6237220/1‑93 (MQ=255)

                                                                tcgcttcgctTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCa                         >  1:6643212/1‑93 (MQ=255)

                                                                tcgcttcgctTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCa                         >  1:4420980/1‑93 (MQ=255)

                                                                tcgcttcgctTTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCa                         <  2:6933074/93‑1 (MQ=255)

                                                                  gcttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAgg                       <  1:4691819/93‑1 (MQ=255)

                                                                  gcttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAgg                       >  2:4800937/1‑93 (MQ=255)

                                                                  gcttcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAgg                       <  1:738510/93‑1 (MQ=255)

                                                                     tcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTAc                    >  2:5702514/1‑93 (MQ=255)

                                                                     tcgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTAc                    >  1:7178716/1‑93 (MQ=255)

                                                                      cgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACt                   <  1:3045719/93‑1 (MQ=255)

                                                                      cgcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACt                   >  1:6397397/1‑93 (MQ=255)

                                                                       gcttTTGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTg                  >  2:1360416/1‑93 (MQ=255)

                                                                         ttttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGgt                <  2:1267451/93‑1 (MQ=255)

                                                                           ttGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGgtgt              <  1:1517047/93‑1 (MQ=255)

                                                                            tGTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGtt             >  1:2353081/1‑93 (MQ=255)

                                                                             gTCTGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGttt            >  1:1348983/1‑93 (MQ=255)

                                                                                tGGGGATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAAt         >  2:2165063/1‑93 (MQ=255)

                                                                                 ggggATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATg        <  1:5688154/93‑1 (MQ=255)

                                                                                 ggggATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATg        >  2:5275216/1‑93 (MQ=255)

                                                                                  gggATTGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATgg       >  2:6890738/1‑93 (MQ=255)

                                                                                      ttGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTc   >  2:5388773/1‑93 (MQ=255)

                                                                                      ttGCCGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTc   <  2:5638833/93‑1 (MQ=255)

TGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCT  >  NC_000913/1672532‑1672711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`