BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,749,920	T→C	E645E (GAA→GAG)	b1673 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,749,920	0	T	C	84.7%	588.3 / 99.3	254	E645E (GAA→GAG)	b1673	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (19/20); new base C (92/123); total (111/143)
Fisher's exact test for biased strand distribution p-value = 5.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.92e-01

Only 100 of 255 total aligned reads displayed.

GTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATCAGTT  >  NC_000913/1749828‑1750011

gTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCt                                                                                             <  1:7014103/93‑1 (MQ=255)

          cAAGCTGTGGGTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGa                                                                                   >  1:2002068/1‑93 (MQ=255)

           aaGCTGTGGGTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGAc                                                                                  <  1:6456748/93‑1 (MQ=255)

           aaGCTGTGGGTCCCAGCCAATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGAc                                                                                  <  2:3005779/93‑1 (MQ=255)

             gCTGTGGGTCCCACCCCATTTCTTTGTAGAGCATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTCCCCTCAGTAAAGACCg                                                                                <  1:7491911/93‑1 (MQ=255)

               tgtgGGTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCggg                                                                              <  1:6671305/93‑1 (MQ=255)

               tgtgGGTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCggg                                                                              >  2:2440908/1‑93 (MQ=255)

               tgtgGGTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCggg                                                                              <  2:2522072/93‑1 (MQ=255)

                   ggTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCt                                                                          <  1:673923/93‑1 (MQ=255)

                    gTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTg                                                                         <  2:5583142/93‑1 (MQ=255)

                     tCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGc                                                                        <  1:2077306/93‑1 (MQ=255)

                     tCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGc                                                                        >  1:4365706/1‑93 (MQ=255)

                      cccAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCg                                                                       <  1:5411907/93‑1 (MQ=255)

                        cAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGa                                                                     >  2:2628162/1‑93 (MQ=255)

                         aGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGAt                                                                    <  2:3964275/93‑1 (MQ=255)

                            ccATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCt                                                                 >  2:3476070/1‑93 (MQ=255)

                             cATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCtt                                                                <  2:6292835/93‑1 (MQ=255)

                              aTTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTg                                                               <  1:1057940/93‑1 (MQ=255)

                              aTTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTg                                                               >  1:3937975/1‑93 (MQ=255)

                              aTTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTg                                                               <  1:2574069/93‑1 (MQ=255)

                               tttCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCttnn                                                              >  1:2271190/1‑91 (MQ=255)

                                 tCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCg                                                            <  2:3415709/93‑1 (MQ=255)

                                  cTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGa                                                           >  2:2838704/1‑93 (MQ=255)

                                   tttGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGaa                                                          <  1:3229575/93‑1 (MQ=255)

                                   tttGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGaa                                                          <  2:3518106/93‑1 (MQ=255)

                                       tAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATAcc                                                      <  2:2888914/93‑1 (MQ=255)

                                         gAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCa                                                    >  2:884330/1‑93 (MQ=255)

                                         gAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCa                                                    <  2:3866257/93‑1 (MQ=255)

                                         gAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCa                                                    <  1:5235306/93‑1 (MQ=255)

                                          aaCATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAg                                                   <  1:3519864/93‑1 (MQ=255)

                                           aCATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTGGAATACCCAgg                                                  >  2:4553086/1‑93 (MQ=255)

                                            cATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGa                                                 >  1:1349929/1‑93 (MQ=255)

                                             aTCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGaa                                                >  1:3869195/1‑93 (MQ=255)

                                             aTCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGaa                                                >  2:6934443/1‑93 (MQ=255)

                                             aTCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGaa                                                >  1:6269018/1‑93 (MQ=255)

                                              tCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAAc                                               >  1:2597139/1‑93 (MQ=255)

                                                gTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAg                                             <  2:4051809/93‑1 (MQ=255)

                                                gTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAg                                             <  1:6597463/93‑1 (MQ=255)

                                                gTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAg                                             <  1:1819340/93‑1 (MQ=255)

                                                 tGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGa                                            >  1:1660882/1‑93 (MQ=255)

                                                 tGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGa                                            >  2:1001728/1‑93 (MQ=255)

                                                    gCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATaa                                         <  1:2784022/93‑1 (MQ=255)

                                                     cGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAg                                        <  1:5965602/93‑1 (MQ=255)

                                                     cGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAg                                        <  1:5078858/93‑1 (MQ=255)

                                                     cGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAg                                        <  2:518406/93‑1 (MQ=255)

                                                      gAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGa                                       <  1:4526730/93‑1 (MQ=255)

                                                       aaGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGAt                                      <  1:3557723/93‑1 (MQ=255)

                                                        aGCATGCATATCGTCACGATCCATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATc                                     <  1:6197869/93‑1 (MQ=255)

                                                        aGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATc                                     <  2:2286945/93‑1 (MQ=255)

                                                        aGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATc                                     <  2:4589101/93‑1 (MQ=255)

                                                        aGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATc                                     <  2:5766311/93‑1 (MQ=255)

                                                        aGCATGCATATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATc                                     >  1:1423887/1‑93 (MQ=255)

                                                         gcatgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCg                                    >  1:6108566/1‑93 (MQ=255)

                                                          catgcatATCGTCACGATCCATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCgt                                   <  2:5491075/93‑1 (MQ=255)

                                                          catgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCgt                                   <  2:171408/93‑1 (MQ=255)

                                                          catgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCgt                                   <  2:6112261/93‑1 (MQ=255)

                                                           atgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCgtg                                  >  2:4994961/1‑93 (MQ=255)

                                                           atgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCgtg                                  >  1:739427/1‑93 (MQ=255)

                                                           atgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCgtg                                  <  2:1170461/93‑1 (MQ=255)

                                                           atgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCgtg                                  <  2:714464/93‑1 (MQ=255)

                                                           atgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCgtg                                  <  1:5337916/93‑1 (MQ=255)

                                                            tgcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTCTCGAATACCCAGGAACAGATAAGATCgagt                                 >  1:5756707/1‑93 (MQ=255)

                                                             gcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGtt                                >  1:3295744/1‑93 (MQ=255)

                                                             gcatATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGtt                                <  1:4249410/93‑1 (MQ=255)

                                                              catATCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTc                               >  1:2409824/1‑93 (MQ=255)

                                                               atatCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCa                              <  1:469723/93‑1 (MQ=255)

                                                                tatCGTCACGATCCATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCAt                             >  1:2928081/1‑93 (MQ=255)

                                                                tatCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCAt                             >  2:4366713/1‑93 (MQ=255)

                                                                 atCGTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCAtt                            <  1:5765046/93‑1 (MQ=255)

                                                                    gTCACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACg                         >  2:742629/1‑93 (MQ=255)

                                                                      cACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCa                       <  1:3582814/93‑1 (MQ=255)

                                                                      cACGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCa                       <  1:1988610/93‑1 (MQ=255)

                                                                        cGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCata                     <  2:3559651/93‑1 (MQ=255)

                                                                        cGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCata                     <  1:5555639/93‑1 (MQ=255)

                                                                        cGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCata                     <  2:2082750/93‑1 (MQ=255)

                                                                        cGATCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCata                     <  1:5667229/93‑1 (MQ=255)

                                                                           tCCATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCt                  <  2:2599209/93‑1 (MQ=255)

                                                                            ccATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCtt                 >  2:6755204/1‑93 (MQ=255)

                                                                            ccATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCtt                 >  1:7175121/1‑93 (MQ=255)

                                                                             cATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCttt                <  1:4108847/93‑1 (MQ=255)

                                                                             cATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCttt                <  1:4576304/93‑1 (MQ=255)

                                                                             cATTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCttt                <  2:2552198/93‑1 (MQ=255)

                                                                              aTTTTGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTg               <  2:5688031/93‑1 (MQ=255)

                                                                               ttttGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTgg              <  2:6015808/93‑1 (MQ=255)

                                                                               ttttGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTgg              >  2:211625/1‑93 (MQ=255)

                                                                               ttttGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTgg              >  1:6815984/1‑93 (MQ=255)

                                                                                 ttGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGtt            <  1:443420/93‑1 (MQ=255)

                                                                                 ttGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGtt            >  1:301990/1‑93 (MQ=255)

                                                                                 ttGTCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGtt            <  2:3781251/93‑1 (MQ=255)

                                                                                    tCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGc         >  2:5232677/1‑93 (MQ=255)

                                                                                    tCAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGc         >  2:1337093/1‑93 (MQ=255)

                                                                                     cAGTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCa        <  1:5742/93‑1 (MQ=255)

                                                                                       gTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATc      <  2:4838775/93‑1 (MQ=255)

                                                                                       gTACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATc      <  1:2995240/93‑1 (MQ=255)

                                                                                        tACCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATCa     >  2:184605/1‑93 (MQ=255)

                                                                                         aCCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATCAg    >  2:6714544/1‑93 (MQ=255)

                                                                                         aCCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATCAg    >  2:1818744/1‑93 (MQ=255)

                                                                                         aCCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATCAg    >  2:7470807/1‑93 (MQ=255)

                                                                                         aCCCTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATCAg    >  1:2260187/1‑93 (MQ=255)

                                                                                           cTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATCAGtt  <  1:6824771/93‑1 (MQ=255)

GTTGGACAACCAAGCTGTGGGTCCCAGCCCATTTCTTTGTAGAACATCGTGAGCGAAGCATGCATATCGTCACGATCCATTTTGTCAGTACCTTCAGTAAAGACCGGGATCTGCGGATCCTTGTCGAATACCCAGGAACAGATAAGATCGTGTTCATTACGCATATCTTTGGTTTGCATCAGTT  >  NC_000913/1749828‑1750011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`