Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,899,288 G→A R108W (CGG→TGG)  yoaE ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,899,2880GA87.3% 846.4 / 74.0 291R108W (CGG→TGG) yoaEputative transport protein
Reads supporting (aligned to +/- strand):  ref base G (12/25);  new base A (116/138);  total (128/163)
Fisher's exact test for biased strand distribution p-value = 1.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.60e-01

Only 100 of 293 total aligned reads displayed.

GACGGCGTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACG  >  NC_000913/1899196‑1899379
                                                                                            |                                                                                           
gaCGGCGTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCg                                                                                             >  2:3904966/1‑93 (MQ=255)
   ggCGTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTc                                                                                          <  1:5891394/93‑1 (MQ=255)
   ggCGTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTc                                                                                          >  2:1995132/1‑93 (MQ=255)
    gCGTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCa                                                                                         >  2:2306508/1‑93 (MQ=255)
     cGTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCAt                                                                                        <  2:1009796/93‑1 (MQ=255)
      gTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATg                                                                                       >  2:2646974/1‑93 (MQ=255)
      gTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATg                                                                                       >  1:4884255/1‑93 (MQ=255)
      gTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATg                                                                                       >  2:1866611/1‑93 (MQ=255)
       tCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGc                                                                                      <  2:3633744/93‑1 (MQ=255)
       tCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGc                                                                                      <  1:6014846/93‑1 (MQ=255)
       tCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGc                                                                                      <  1:3520379/93‑1 (MQ=255)
       tCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGc                                                                                      <  2:6581048/93‑1 (MQ=255)
        cAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCa                                                                                     <  1:4044988/93‑1 (MQ=255)
        cAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCa                                                                                     <  1:2565557/93‑1 (MQ=255)
         aaGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAg                                                                                    >  1:5599245/1‑93 (MQ=255)
          aGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGt                                                                                   >  1:2042838/1‑93 (MQ=255)
          aGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGt                                                                                   >  1:6631073/1‑93 (MQ=255)
          aGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGt                                                                                   >  2:5223827/1‑93 (MQ=255)
           ggATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGtt                                                                                  <  1:1945920/93‑1 (MQ=255)
           ggATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGtt                                                                                  >  1:4952272/1‑93 (MQ=255)
            gATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCAGTTc                                                                                 >  2:911258/1‑93 (MQ=255)
              tGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCgg                                                                               <  2:5450533/93‑1 (MQ=255)
                aCAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGgtt                                                                             <  2:5911765/93‑1 (MQ=255)
                aCAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGgtt                                                                             <  1:6640682/93‑1 (MQ=255)
                  aaTCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGgttgt                                                                           <  1:4179793/93‑1 (MQ=255)
                     cTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGc                                                                        <  1:1053591/93‑1 (MQ=255)
                        tgtgACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCttt                                                                     <  1:6364336/93‑1 (MQ=255)
                          tgACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGa                                                                   <  1:2403725/93‑1 (MQ=255)
                            acgacCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAAc                                                                 <  2:5531208/93‑1 (MQ=255)
                            acgacCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAAc                                                                 <  2:7154715/93‑1 (MQ=255)
                              gacCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAg                                                               <  1:7226241/93‑1 (MQ=255)
                              gacCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAg                                                               <  1:1579929/93‑1 (MQ=255)
                              gacCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAg                                                               >  1:5404149/1‑93 (MQ=255)
                               accaccCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAACAGc                                                              <  1:7045003/93‑1 (MQ=255)
                                  accCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAg                                                           >  2:112469/1‑93 (MQ=255)
                                   cccAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGa                                                          >  2:3293502/1‑93 (MQ=255)
                                   cccAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGa                                                          <  1:750360/93‑1 (MQ=255)
                                     cAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAat                                                        >  1:5693330/1‑93 (MQ=255)
                                      aGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAata                                                       <  1:129388/93‑1 (MQ=255)
                                        aaaCTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATc                                                     <  2:3705018/93‑1 (MQ=255)
                                         aaCTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATcc                                                    <  1:4138465/93‑1 (MQ=255)
                                         aaCTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATcc                                                    <  2:6934414/93‑1 (MQ=255)
                                          aCTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATccc                                                   <  2:2925494/93‑1 (MQ=255)
                                          aCTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATccc                                                   <  2:1409506/93‑1 (MQ=255)
                                           cTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATcccc                                                  <  2:307781/93‑1 (MQ=255)
                                             ggCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATcccccc                                                <  2:6170890/93‑1 (MQ=255)
                                               cGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGa                                              >  1:1029061/1‑93 (MQ=255)
                                                gTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGaa                                             >  1:359817/1‑93 (MQ=255)
                                                gTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGaa                                             >  1:2777720/1‑93 (MQ=255)
                                                 tAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGaac                                            >  2:429154/1‑93 (MQ=255)
                                                 tAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGaac                                            <  1:4521830/93‑1 (MQ=255)
                                                  aGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGaaca                                           >  2:2084582/1‑93 (MQ=255)
                                                    ccTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGaacaac                                         >  2:6971617/1‑93 (MQ=255)
                                                     cTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAacaaca                                        <  1:2958649/93‑1 (MQ=255)
                                                      tttACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACAt                                       >  1:6867294/1‑93 (MQ=255)
                                                       ttACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATa                                      >  2:6104947/1‑93 (MQ=255)
                                                       ttACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATa                                      >  2:3442149/1‑93 (MQ=255)
                                                        tACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATaa                                     <  1:5023790/93‑1 (MQ=255)
                                                        tACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATaa                                     >  1:3664532/1‑93 (MQ=255)
                                                         aCCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAAt                                    >  1:5222046/1‑93 (MQ=255)
                                                          ccGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATc                                   <  1:6939052/93‑1 (MQ=255)
                                                          ccGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATc                                   <  2:6876687/93‑1 (MQ=255)
                                                          ccGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATc                                   <  2:6526153/93‑1 (MQ=255)
                                                           cGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCa                                  <  1:5499221/93‑1 (MQ=255)
                                                           cGTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCa                                  <  1:7297876/93‑1 (MQ=255)
                                                            gTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAg                                 <  2:7092559/93‑1 (MQ=255)
                                                            gTGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAg                                 <  1:2342128/93‑1 (MQ=255)
                                                             tGGCCGGAATCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAgg                                <  2:1603289/93‑1 (MQ=255)
                                                               gCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTc                              <  2:6429801/93‑1 (MQ=255)
                                                                    aaTCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTc                         <  2:20079/93‑1 (MQ=255)
                                                                     aTCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTcc                        >  2:441390/1‑93 (MQ=255)
                                                                     aTCATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTcc                        >  2:2819647/1‑93 (MQ=255)
                                                                       cATGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCgg                      >  1:3176206/1‑93 (MQ=255)
                                                                         tGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggag                    >  1:2919985/1‑93 (MQ=255)
                                                                         tGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggag                    >  1:480236/1‑93 (MQ=255)
                                                                         tGATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggag                    >  2:6657370/1‑93 (MQ=255)
                                                                          gATCGCGGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggaga                   <  2:4643828/93‑1 (MQ=255)
                                                                          gATCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggaga                   <  2:4066837/93‑1 (MQ=255)
                                                                           aTCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaa                  >  1:680160/1‑93 (MQ=255)
                                                                            tCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaag                 <  2:3715493/93‑1 (MQ=255)
                                                                            tCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaag                 <  1:4399324/93‑1 (MQ=255)
                                                                            tCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaag                 >  1:6083296/1‑93 (MQ=255)
                                                                            tCGCGGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaag                 >  2:5022352/1‑93 (MQ=255)
                                                                              gcgGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaagga               >  1:5311669/1‑93 (MQ=255)
                                                                               cgGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaaggag              <  2:5634578/93‑1 (MQ=255)
                                                                               cgGTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaaggag              <  2:5281506/93‑1 (MQ=255)
                                                                                ggTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaaggaga             <  2:477468/93‑1 (MQ=255)
                                                                                 gTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaaggagaa            >  1:2291340/1‑93 (MQ=255)
                                                                                 gTTTTCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCggagaaggagaa            >  1:3928360/1‑93 (MQ=255)
                                                                                  ttttCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGaaa           >  1:6602706/1‑93 (MQ=255)
                                                                                   tttCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAAt          >  2:800316/1‑93 (MQ=255)
                                                                                   tttCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAAt          >  2:2414771/1‑93 (MQ=255)
                                                                                    ttCCAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATc         >  1:1491138/1‑93 (MQ=255)
                                                                                      ccAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCa       >  1:2187318/1‑93 (MQ=255)
                                                                                      ccAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCa       <  2:739225/93‑1 (MQ=255)
                                                                                      ccAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCa       <  1:2757515/93‑1 (MQ=255)
                                                                                       cAGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCAt      >  2:7059270/1‑93 (MQ=255)
                                                                                        aGCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATg     >  1:4659810/1‑93 (MQ=255)
                                                                                         gCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGa    <  2:1191277/93‑1 (MQ=255)
                                                                                         gCCATTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGa    >  2:2472923/1‑93 (MQ=255)
                                                                                            |                                                                                           
GACGGCGTCAAGGATGACAATCTGTGTGACGACCACCCAGAAACTGGCGTAGCCTTTACCGTGGCCGGAATCATGATCGCGGTTTTCCAGCCGTTCATGCAGTTCGGTTGTTGCTTTGAACAGCAAGAATATCCCCCCGAACAACATAATCAGGTCGCGTCCGGAGAAGGAGAAATCCATGACG  >  NC_000913/1899196‑1899379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: