Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,902,950 T→C R42R (CGT→CGC)  b1820 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,902,9500TC88.4% 636.4 / 63.5 251R42R (CGT→CGC) b1820hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (14/15);  new base C (111/111);  total (125/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 258 total aligned reads displayed.

ATCGCCGCACTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTTAATAACGACATGGTT  >  NC_000913/1902858‑1903042
                                                                                            |                                                                                            
aTCGCCGCACTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGt                                                                                              >  2:6113776/1‑93 (MQ=255)
  cgccgcCCTCCTGGCCTTCGCGATCTACGATCAGTTCATCATCCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCgg                                                                                            <  1:3027430/93‑1 (MQ=255)
  cgccgcCCTCCTGCCCTTCGCGATCTACGATCAGTTCATCATCCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCgg                                                                                            <  1:5154172/93‑1 (MQ=255)
   gccgccCTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGt                                                                                           <  2:747915/93‑1 (MQ=255)
   gccgcACTCCTGGCCTTCGCGATCTATGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGt                                                                                           >  1:7314271/1‑93 (MQ=255)
    ccgcCCTCTTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTc                                                                                          <  1:7018347/93‑1 (MQ=255)
       cccTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCa                                                                                       <  1:5532369/91‑1 (MQ=255)
       cccTCCTGGCCTCCGCAATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCa                                                                                       <  1:6179855/91‑1 (MQ=255)
        ccTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCAt                                                                                      <  1:860695/92‑1 (MQ=255)
        ccTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCAt                                                                                      <  2:7531814/92‑1 (MQ=255)
        aCTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCAt                                                                                      >  1:3129925/1‑93 (MQ=255)
        aCTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCAt                                                                                      >  2:1278648/1‑93 (MQ=255)
        aCTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCAt                                                                                      >  2:4230625/1‑93 (MQ=255)
         cTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCann                                                                                     >  1:2899814/1‑91 (MQ=255)
         cTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATc                                                                                     >  2:2346028/1‑93 (MQ=255)
         cTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATc                                                                                     >  1:5938902/1‑93 (MQ=255)
         cTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATc                                                                                     >  1:3460003/1‑93 (MQ=255)
         cTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATc                                                                                     >  1:6148543/1‑93 (MQ=255)
          tCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCg                                                                                    >  1:4897837/1‑93 (MQ=255)
           ccTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGa                                                                                   <  2:1503049/93‑1 (MQ=255)
           ccTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGa                                                                                   <  2:1620421/93‑1 (MQ=255)
            cTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGAt                                                                                  >  1:6659514/1‑93 (MQ=255)
            cTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGAt                                                                                  <  2:2657457/93‑1 (MQ=255)
            cTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGAt                                                                                  <  2:6885710/93‑1 (MQ=255)
             tGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATa                                                                                 >  2:665049/1‑93 (MQ=255)
              ggCCTCCGCGATCTACGATCGGTTCATCAGCCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAg                                                                                <  1:2765842/93‑1 (MQ=255)
                 cTTCGCTATCTACGATCAGTTTATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCTGGCGCGGTCGCATCGATAGCGt                                                                             <  1:4664161/93‑1 (MQ=255)
                 cTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGt                                                                             >  2:1356072/1‑93 (MQ=255)
                 cTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGt                                                                             >  1:1733754/1‑93 (MQ=255)
                  ttCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGtt                                                                            >  1:5567163/1‑93 (MQ=255)
                    cgcgATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTAt                                                                          <  2:432576/93‑1 (MQ=255)
                     gcgATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATc                                                                         >  2:2590857/1‑93 (MQ=255)
                     gcgATCTACGATCAGTTCATCATCCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATc                                                                         <  1:4270003/93‑1 (MQ=255)
                       gATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCtt                                                                       >  2:4963898/1‑93 (MQ=255)
                          cTACGATCATTTCATCATCCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTtcgt                                                                    <  1:3311671/93‑1 (MQ=255)
                          cTACGATCATTTCATCACCCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCACGGTCGCATCGATAGCGTTATCTtcgt                                                                    <  1:1891971/93‑1 (MQ=255)
                          cTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTtcgt                                                                    <  2:3382818/93‑1 (MQ=255)
                           tACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTtcgtc                                                                   <  1:1781348/93‑1 (MQ=255)
                           tACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTtcgtc                                                                   >  1:4170574/1‑93 (MQ=255)
                           tACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTtcgtc                                                                   >  2:6847451/1‑93 (MQ=255)
                           tACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTtcgtc                                                                   >  1:5891498/1‑93 (MQ=255)
                             cGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCgg                                                                 >  2:7053975/1‑93 (MQ=255)
                              gATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGga                                                                >  1:392559/1‑93 (MQ=255)
                               aTCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGgat                                                               >  1:4383062/1‑93 (MQ=255)
                                  aGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGgattga                                                            <  1:1073043/93‑1 (MQ=255)
                                   tttCATCACGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGgattgat                                                           <  1:3568378/92‑1 (MQ=255)
                                    ttCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGgattgatt                                                          <  2:4532903/93‑1 (MQ=255)
                                    ttCATCACCCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGgattgatt                                                          <  1:5272062/93‑1 (MQ=255)
                                     tcatcaTGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGattgattg                                                         <  2:6307870/93‑1 (MQ=255)
                                     tcatcaTGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGattgattg                                                         >  1:7488923/1‑93 (MQ=255)
                                     tcatcaTGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGattgattg                                                         >  1:4955732/1‑93 (MQ=255)
                                      catcatGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGt                                                        <  2:4807977/93‑1 (MQ=255)
                                      catcatGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATAGATAGCGTTATCTTCGTCGGATTGATTGt                                                        <  2:6381142/93‑1 (MQ=255)
                                       atcatGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTc                                                       >  2:5818248/1‑93 (MQ=255)
                                       atcatGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTc                                                       >  2:3908483/1‑93 (MQ=255)
                                         catGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCAt                                                     >  2:3645076/1‑93 (MQ=255)
                                         catCCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCAt                                                     <  1:6563118/93‑1 (MQ=255)
                                          atcccccGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCAtt                                                    <  1:6742511/90‑1 (MQ=255)
                                          atGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCAtt                                                    >  1:7109572/1‑93 (MQ=255)
                                            gCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCt                                                  <  2:568250/93‑1 (MQ=255)
                                             ccccGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCtt                                                 >  1:3260195/1‑93 (MQ=255)
                                              cccGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTa                                                <  2:3022518/93‑1 (MQ=255)
                                              cccGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTa                                                >  1:6259744/1‑93 (MQ=255)
                                              cccGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTa                                                >  1:1945368/1‑93 (MQ=255)
                                               ccgccgTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTAt                                               >  1:1316391/1‑93 (MQ=255)
                                                cgccgTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATc                                              >  2:3986063/1‑93 (MQ=255)
                                                cgccgTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATc                                              >  2:1772011/1‑93 (MQ=255)
                                                 gccgTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCt                                             <  2:535852/93‑1 (MQ=255)
                                                 gccgTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCt                                             >  2:3584599/1‑93 (MQ=255)
                                                 gccgTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCt                                             >  2:1289407/1‑93 (MQ=255)
                                                     tAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATaa                                         >  2:2812359/1‑93 (MQ=255)
                                                       aCGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATaaca                                       <  2:5151561/93‑1 (MQ=255)
                                                        cGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATaacaa                                      >  1:6725878/1‑93 (MQ=255)
                                                        cGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATaacaa                                      >  1:2693316/1‑93 (MQ=255)
                                                        cGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATaacaa                                      >  2:6570220/1‑93 (MQ=255)
                                                          gCCCCACCCTGCTGGCATTTCCTTTGCTCCGTCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACg                                    <  1:2620459/93‑1 (MQ=255)
                                                          gCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACg                                    >  2:2120987/1‑93 (MQ=255)
                                                           ccccccccTGCTGGGAATTCCTTTTCCCCGGGCCGGGCCCCACGATAACCTTTTCCTCCTCGGGTTTATTTTCCTTCTTATCTATAACAACGt                                   <  1:4556212/93‑1 (MQ=255)
                                                            cccACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTc                                  <  2:3052208/93‑1 (MQ=255)
                                                             ccACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGTATTGATTGTCATTCTTATCTATAACAACGTCa                                 >  1:5813583/1‑93 (MQ=255)
                                                             ccACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCa                                 >  2:1142189/1‑93 (MQ=255)
                                                             ccACCCTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCa                                 <  2:296895/93‑1 (MQ=255)
                                                                cccTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGa                              >  1:4196541/1‑93 (MQ=255)
                                                                 ccTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGaa                             <  2:948175/93‑1 (MQ=255)
                                                                 ccTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGaa                             <  2:5225583/93‑1 (MQ=255)
                                                                 ccTGCTGGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGaa                             <  2:2490130/93‑1 (MQ=255)
                                                                  ctgctgGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAAt                            >  2:60124/1‑93 (MQ=255)
                                                                      tgGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATg                        <  2:4727904/93‑1 (MQ=255)
                                                                      tgGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATg                        <  2:7192584/93‑1 (MQ=255)
                                                                      tgGCAATTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATg                        >  1:2308343/1‑93 (MQ=255)
                                                                          aaTTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGc                    <  2:2280289/93‑1 (MQ=255)
                                                                           aTTCCTTTGCTTCGGGGCGGTCGCATCGATAGCGGTATCTTCGTCGGATTTATTGGCATTCTTATCTATAACAACGTCACGAATCATGGTGCg                   <  2:7286684/93‑1 (MQ=255)
                                                                           aTTCCTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCg                   <  2:6466856/93‑1 (MQ=255)
                                                                               cTTTGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTtaa               >  1:6100962/1‑93 (MQ=255)
                                                                                tttGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTtaat              >  1:5342060/1‑93 (MQ=255)
                                                                                tttGCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTtaat              >  2:4302854/1‑93 (MQ=255)
                                                                                   gCTCCGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTTAATAAc           >  2:3290475/1‑93 (MQ=255)
                                                                                       cGGCGCGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTTAATAACGACa       <  2:4845971/93‑1 (MQ=255)
                                                                                        ggCGCGGTCGCATCGATAGCGTTTTCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACTAATCATGGTGCGTTAATAACGACAt      <  1:2066657/93‑1 (MQ=255)
                                                                                         gcgcGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTTAATAACGACATg     <  1:6839354/93‑1 (MQ=255)
                                                                                            |                                                                                            
ATCGCCGCACTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTTAATAACGACATGGTT  >  NC_000913/1902858‑1903042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑