Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,909,232 A→G T311T (ACA→ACG)  b1828 → putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,909,2320AG86.7% 602.1 / 70.5 248T311T (ACA→ACG) b1828putative transport protein
Reads supporting (aligned to +/- strand):  ref base A (15/18);  new base G (97/118);  total (112/136)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 251 total aligned reads displayed.

TCTGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGGGTTGTT  >  NC_000913/1909141‑1909324
                                                                                           |                                                                                            
tCTGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGacac                                                                                             <  2:3311354/93‑1 (MQ=255)
 cTGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGcc                                                                                            >  2:4575077/1‑93 (MQ=255)
  tGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCg                                                                                           >  2:1284631/1‑93 (MQ=255)
  tGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCg                                                                                           <  1:1545737/93‑1 (MQ=255)
  tGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCg                                                                                           <  1:3469941/93‑1 (MQ=255)
  ggcgcACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCg                                                                                           >  1:4872219/2‑93 (MQ=255)
   gcgcACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGt                                                                                          <  1:6910826/93‑1 (MQ=255)
     gcACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTgg                                                                                        <  1:902047/93‑1 (MQ=255)
     gcACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTgg                                                                                        >  2:2318724/1‑93 (MQ=255)
     gcACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTgg                                                                                        >  1:3410040/1‑93 (MQ=255)
     gcACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTgg                                                                                        <  1:532346/93‑1 (MQ=255)
      cacaAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGc                                                                                       <  1:225518/93‑1 (MQ=255)
       acaAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGcc                                                                                      >  2:6286757/1‑93 (MQ=255)
        caAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCg                                                                                     >  1:5910269/1‑93 (MQ=255)
          aaTGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGtt                                                                                   >  1:577714/1‑93 (MQ=255)
          aaTGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGtt                                                                                   >  2:7160977/1‑93 (MQ=255)
             gCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGc                                                                                <  1:3738126/93‑1 (MQ=255)
               tGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCaa                                                                              <  2:788612/93‑1 (MQ=255)
                ggCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAAc                                                                             <  1:4394444/93‑1 (MQ=255)
                 gCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACg                                                                            >  1:4158460/1‑93 (MQ=255)
                  cAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGa                                                                           <  2:3919320/93‑1 (MQ=255)
                  cAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGa                                                                           <  2:6421739/93‑1 (MQ=255)
                   aaTGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGAt                                                                          <  1:3654950/93‑1 (MQ=255)
                   aaTGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGAt                                                                          >  1:7040939/1‑93 (MQ=255)
                   aaTGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGAt                                                                          >  1:5532458/1‑93 (MQ=255)
                   aaTGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGAt                                                                          <  2:7441000/93‑1 (MQ=255)
                    aTGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATg                                                                         <  2:1830210/93‑1 (MQ=255)
                     tGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATgg                                                                        <  1:2477832/93‑1 (MQ=255)
                     tGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATgg                                                                        >  2:3677563/1‑93 (MQ=255)
                     tGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATgg                                                                        <  1:2039048/93‑1 (MQ=255)
                     tGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATgg                                                                        <  2:4160136/93‑1 (MQ=255)
                        tttCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGa                                                                     <  1:2646793/93‑1 (MQ=255)
                        tttCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGa                                                                     >  1:6066943/1‑93 (MQ=255)
                        tttCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGa                                                                     >  2:5522066/1‑93 (MQ=255)
                        tttCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGa                                                                     <  2:1888355/93‑1 (MQ=255)
                        tttCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGa                                                                     <  1:7217129/93‑1 (MQ=255)
                          tCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATg                                                                   <  2:6100064/93‑1 (MQ=255)
                          tCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATg                                                                   >  1:5674494/1‑93 (MQ=255)
                             cTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCt                                                                >  2:1147474/1‑93 (MQ=255)
                               gCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTcc                                                              >  2:5014015/1‑93 (MQ=255)
                               gCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTcc                                                              >  2:1776084/1‑93 (MQ=255)
                                 ccTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGc                                                            <  2:6719263/93‑1 (MQ=255)
                                   ttttACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTg                                                          <  1:1130281/93‑1 (MQ=255)
                                   ttttACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTg                                                          >  1:104555/1‑93 (MQ=255)
                                    tttACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTgg                                                         >  1:4057487/1‑93 (MQ=255)
                                    tttACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTgg                                                         <  1:6375954/93‑1 (MQ=255)
                                    tttACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTgg                                                         >  2:3272879/1‑93 (MQ=255)
                                      tACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCa                                                       <  2:1103187/93‑1 (MQ=255)
                                      tACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCa                                                       >  2:1237774/1‑93 (MQ=255)
                                      tACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCa                                                       <  1:7470227/93‑1 (MQ=255)
                                         cTGCAAACCGTGCTCGGGCGTAGTGAAGTCCAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGc                                                    >  2:2102800/1‑93 (MQ=255)
                                          tGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCt                                                   >  2:5653491/1‑93 (MQ=255)
                                            cAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTAt                                                 <  2:1933852/93‑1 (MQ=255)
                                             aaaCCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTAtt                                                >  1:3198598/1‑93 (MQ=255)
                                             aaaCCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTAtt                                                <  2:599266/93‑1 (MQ=255)
                                              aaCCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGTCAGGCTAttt                                               <  1:6726147/93‑1 (MQ=255)
                                              aaCCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTAttt                                               >  2:1071044/1‑93 (MQ=255)
                                                ccGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATttga                                             >  2:4791893/1‑93 (MQ=255)
                                                 cGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATttgat                                            <  1:2640207/93‑1 (MQ=255)
                                                 cGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATttgat                                            <  2:4385581/93‑1 (MQ=255)
                                                  gTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATttgatt                                           <  2:4636948/93‑1 (MQ=255)
                                                      tCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAAc                                       <  2:5116318/93‑1 (MQ=255)
                                                       cGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAAcg                                      >  2:6796185/1‑93 (MQ=255)
                                                        gggCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAAcgc                                     <  1:7335983/93‑1 (MQ=255)
                                                         ggCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAAcgcg                                    >  2:408717/1‑93 (MQ=255)
                                                          gCGTAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGt                                   >  2:6916604/1‑93 (MQ=255)
                                                             tAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACa                                <  2:6696573/93‑1 (MQ=255)
                                                             tAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACa                                >  1:6596385/1‑93 (MQ=255)
                                                             tAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACa                                <  2:4511742/93‑1 (MQ=255)
                                                             tAGTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACa                                <  2:5402320/93‑1 (MQ=255)
                                                               gTGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATg                              >  2:2891391/1‑93 (MQ=255)
                                                                tGAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGc                             <  2:3123591/93‑1 (MQ=255)
                                                                 gAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCa                            <  2:5147335/93‑1 (MQ=255)
                                                                 gAAGTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCa                            <  1:4488271/93‑1 (MQ=255)
                                                                 gAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCa                            <  1:2724784/93‑1 (MQ=255)
                                                                    gTCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGa                         >  1:2807671/1‑93 (MQ=255)
                                                                     tCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGAt                        <  2:1424530/93‑1 (MQ=255)
                                                                     tCGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGAt                        <  1:1378706/93‑1 (MQ=255)
                                                                      cGAAACAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGAtt                       <  2:863294/93‑1 (MQ=255)
                                                                        aaaCAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGc                     <  2:4475179/93‑1 (MQ=255)
                                                                        aaaCAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGc                     >  2:7168051/1‑93 (MQ=255)
                                                                         aaCAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCt                    <  1:7066079/93‑1 (MQ=255)
                                                                         aaCAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCt                    >  2:3829436/1‑93 (MQ=255)
                                                                          aCAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTNCTg                   >  1:6100676/1‑93 (MQ=255)
                                                                          aCAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTg                   >  2:574615/1‑93 (MQ=255)
                                                                          aCAGGTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTg                   <  2:3372679/93‑1 (MQ=255)
                                                                           cAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTgg                  >  1:4129791/1‑93 (MQ=255)
                                                                           cAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTgg                  >  2:2415881/1‑93 (MQ=255)
                                                                             ggTTTACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTgggg                >  1:6850882/1‑93 (MQ=255)
                                                                             ggTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTgggg                <  2:3909617/93‑1 (MQ=255)
                                                                               tttACTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGc              >  2:5472951/1‑93 (MQ=255)
                                                                                  aCTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCttt           <  2:4068524/93‑1 (MQ=255)
                                                                                   cTTCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCGATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTa          <  1:1891101/93‑1 (MQ=255)
                                                                                    ttCTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAg         <  2:3354493/93‑1 (MQ=255)
                                                                                      cTGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAggg       >  1:2457226/1‑93 (MQ=255)
                                                                                       tGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGGgt      <  1:1734616/93‑1 (MQ=255)
                                                                                       tGACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGCgt      <  2:4736030/93‑1 (MQ=255)
                                                                                        gACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGGgtt     <  2:271944/93‑1 (MQ=255)
                                                                                        gACGCCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGGgtt     >  1:648377/1‑93 (MQ=255)
                                                                                         acacCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGGgttg    <  2:3758653/93‑1 (MQ=255)
                                                                                           |                                                                                            
TCTGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGGGTTGTT  >  NC_000913/1909141‑1909324

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑