Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,981,668 A→G G475G (GGT→GGC araG ← ATP‑binding component of high‑affinity L‑arabinose transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,981,6680AG89.0% 661.5 / 58.3 254G475G (GGT→GGCaraGATP‑binding component of high‑affinity L‑arabinose transport system
Reads supporting (aligned to +/- strand):  ref base A (17/11);  new base G (113/113);  total (130/124)
Fisher's exact test for biased strand distribution p-value = 3.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.23e-01

Only 100 of 254 total aligned reads displayed.

CTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGC  >  NC_000913/1981577‑1981757
                                                                                           |                                                                                         
cTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCAc                                                                                          >  2:5479566/1‑93 (MQ=255)
 tCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGcc                                                                                         >  2:360060/1‑93 (MQ=255)
  cAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCt                                                                                        <  2:1469674/93‑1 (MQ=255)
   aGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCtt                                                                                       >  1:2394432/1‑93 (MQ=255)
    ggCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTc                                                                                      <  1:2696786/93‑1 (MQ=255)
     gCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTcc                                                                                     <  2:2239881/93‑1 (MQ=255)
     gCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTcc                                                                                     <  1:4785189/93‑1 (MQ=255)
        aCAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGc                                                                                  >  1:4426201/1‑93 (MQ=255)
        aCAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGc                                                                                  <  2:3959024/93‑1 (MQ=255)
          aGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCAt                                                                                <  2:2871446/93‑1 (MQ=255)
           gCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATc                                                                               >  2:3322226/1‑93 (MQ=255)
            ccTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATca                                                                              <  2:2276600/93‑1 (MQ=255)
            ccTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATca                                                                              <  2:5325450/93‑1 (MQ=255)
             cTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATcac                                                                             >  2:6572589/1‑93 (MQ=255)
             cTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATcac                                                                             <  1:3332500/93‑1 (MQ=255)
             cTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATcac                                                                             >  1:3279722/1‑93 (MQ=255)
              tGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATcacc                                                                            >  2:2564116/1‑93 (MQ=255)
              tGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATcacc                                                                            >  1:5076414/1‑93 (MQ=255)
                gCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATcaccac                                                                          <  2:4509860/93‑1 (MQ=255)
                gCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATcaccac                                                                          >  1:6349149/1‑93 (MQ=255)
                 cTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACcaca                                                                         >  1:4571652/1‑93 (MQ=255)
                  tGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACaa                                                                        >  2:1613894/1‑93 (MQ=255)
                   gACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAAt                                                                       <  2:172545/93‑1 (MQ=255)
                   gACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAAt                                                                       <  1:5163405/93‑1 (MQ=255)
                    aCTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATc                                                                      >  1:3137794/1‑93 (MQ=255)
                    aCTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATc                                                                      <  2:2977804/93‑1 (MQ=255)
                    aCTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATc                                                                      >  1:2322856/1‑93 (MQ=255)
                    aCTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATc                                                                      <  1:4665045/93‑1 (MQ=255)
                      tttAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCg                                                                    >  2:7233281/1‑93 (MQ=255)
                      tttAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCg                                                                    >  2:6458467/1‑93 (MQ=255)
                        tAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGt                                                                  <  2:6204000/93‑1 (MQ=255)
                          ggCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCg                                                                >  2:2586193/1‑93 (MQ=255)
                           gCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCgg                                                               >  1:4605499/1‑93 (MQ=255)
                            cATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGc                                                              <  1:3917763/93‑1 (MQ=255)
                             aTCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCa                                                             >  1:6610053/1‑93 (MQ=255)
                              tCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCaa                                                            >  2:2816322/1‑93 (MQ=255)
                               cGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAAc                                                           >  2:2472804/1‑93 (MQ=255)
                               cGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAAc                                                           <  1:1934145/93‑1 (MQ=255)
                               cGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAAc                                                           <  1:6818274/93‑1 (MQ=255)
                                gCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACg                                                          >  2:4290858/1‑93 (MQ=255)
                                  aaGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGcc                                                        <  1:3681068/93‑1 (MQ=255)
                                   aGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCg                                                       >  1:2469142/1‑93 (MQ=255)
                                    ggCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGa                                                      >  2:1197246/1‑93 (MQ=255)
                                    ggCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGa                                                      <  1:6799411/93‑1 (MQ=255)
                                    ggCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGa                                                      <  2:6870155/93‑1 (MQ=255)
                                    ggCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGa                                                      <  2:578420/93‑1 (MQ=255)
                                    ggCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGa                                                      >  1:4073618/1‑93 (MQ=255)
                                    ggCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCACGCCCACAATCCGGTCGGCAACGCCGa                                                      <  2:3063748/93‑1 (MQ=255)
                                     gCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                     >  2:3467839/1‑93 (MQ=255)
                                     gCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                     <  2:4990814/93‑1 (MQ=255)
                                          gTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACtt                                                >  2:7386028/1‑93 (MQ=255)
                                           tGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTc                                               <  1:1619239/93‑1 (MQ=255)
                                           tGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTc                                               >  1:3076876/1‑93 (MQ=255)
                                           tGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTc                                               <  2:2083306/93‑1 (MQ=255)
                                           tGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTc                                               <  1:15503/93‑1 (MQ=255)
                                            gCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACCATCCGGTCGGGAAAGCCGAGGGCTTCa                                              >  1:7469611/1‑93 (MQ=255)
                                            gCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCa                                              >  2:2674487/1‑93 (MQ=255)
                                            gCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCa                                              <  1:5468184/93‑1 (MQ=255)
                                            gCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCa                                              >  1:2417538/1‑93 (MQ=255)
                                            gCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCa                                              >  2:3184685/1‑93 (MQ=255)
                                              cTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAgg                                            >  2:218448/1‑93 (MQ=255)
                                              cTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAgg                                            >  1:5219551/1‑93 (MQ=255)
                                               tGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGt                                           >  1:3451120/1‑93 (MQ=255)
                                                gACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTa                                          >  1:1160873/1‑93 (MQ=255)
                                                    cTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTc                                      >  1:701114/1‑93 (MQ=255)
                                                    cTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTc                                      <  1:340033/93‑1 (MQ=255)
                                                      cATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGc                                    >  1:2910693/1‑93 (MQ=255)
                                                       aTCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCt                                   >  1:3203478/1‑93 (MQ=255)
                                                        tCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTg                                  <  1:5741496/93‑1 (MQ=255)
                                                        tCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGCAAGTCGCTg                                  >  2:7290654/1‑93 (MQ=255)
                                                          tgcctgcTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGa                                <  1:4881814/93‑1 (MQ=255)
                                                           gcctgcTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAg                               <  1:5010548/93‑1 (MQ=255)
                                                           gcctgcTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAg                               <  2:2009221/93‑1 (MQ=255)
                                                              tgcTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCa                            >  2:5411814/1‑93 (MQ=255)
                                                              tgcTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCa                            >  1:6590197/1‑93 (MQ=255)
                                                                 tCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAAc                         >  2:2896169/1‑93 (MQ=255)
                                                                 tCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAAc                         <  1:1117181/93‑1 (MQ=255)
                                                                 tCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAAc                         <  1:2569780/93‑1 (MQ=255)
                                                                   gtgtAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAg                       >  2:910701/1‑93 (MQ=255)
                                                                     gtAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCa                     <  1:7420793/93‑1 (MQ=255)
                                                                      tAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCAc                    >  1:179826/1‑93 (MQ=255)
                                                                      tAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCAc                    >  1:4524569/1‑93 (MQ=255)
                                                                      tAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCAc                    <  2:3764182/93‑1 (MQ=255)
                                                                       aaCAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCAcc                   >  2:5653936/1‑93 (MQ=255)
                                                                        aCAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCg                  >  1:5995004/1‑93 (MQ=255)
                                                                         cAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGc                 <  2:3505188/93‑1 (MQ=255)
                                                                          aaTTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGcc                <  2:309996/93‑1 (MQ=255)
                                                                          aaTTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGcc                >  2:5170669/1‑93 (MQ=255)
                                                                           aTTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCa               <  2:472064/93‑1 (MQ=255)
                                                                           aTTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCa               <  2:1877524/93‑1 (MQ=255)
                                                                           aTTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCa               <  2:1063107/93‑1 (MQ=255)
                                                                              cACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGc            <  1:6897032/93‑1 (MQ=255)
                                                                               aCCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGcc           <  1:798099/93‑1 (MQ=255)
                                                                               aCCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGcc           >  2:1967047/1‑93 (MQ=255)
                                                                                  ggCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTg        >  1:6189318/1‑93 (MQ=255)
                                                                                  ggCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTg        >  2:7356875/1‑93 (MQ=255)
                                                                                     gATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTgcgc     >  2:6760867/1‑93 (MQ=255)
                                                                                     gATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTgcgc     <  2:3621803/93‑1 (MQ=255)
                                                                                      aTTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGcgcc    >  1:2998235/1‑93 (MQ=255)
                                                                                       tttCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGcgccg   >  1:4257703/1‑93 (MQ=255)
                                                                                           |                                                                                         
CTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGC  >  NC_000913/1981577‑1981757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: