Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,982,766 C→T P109P (CCG→CCA araG ← ATP‑binding component of high‑affinity L‑arabinose transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,982,7660CT87.6% 724.5 / 60.7 251P109P (CCG→CCAaraGATP‑binding component of high‑affinity L‑arabinose transport system
Reads supporting (aligned to +/- strand):  ref base C (13/18);  new base T (117/102);  total (131/120)
Fisher's exact test for biased strand distribution p-value = 2.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01

Only 100 of 252 total aligned reads displayed.

GTGTCCGGGTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGTTAAGTGC  >  NC_000913/1982677‑1982858
                                                                                         |                                                                                            
gtgtCCGGGTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGc                                                                                           <  2:3751949/93‑1 (MQ=255)
   tCCGGGTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGc                                                                                        >  1:3182660/1‑93 (MQ=255)
   tCCGGGTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGc                                                                                        <  1:668692/93‑1 (MQ=255)
   tCCGGGTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGc                                                                                        >  1:2322096/1‑93 (MQ=255)
    ccGGGTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCt                                                                                       >  2:5688457/1‑93 (MQ=255)
      gggTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTgg                                                                                     >  1:101264/1‑93 (MQ=255)
        gTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGcc                                                                                   <  2:2718381/93‑1 (MQ=255)
         tCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCg                                                                                  >  2:5259433/1‑93 (MQ=255)
           aaTATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCgag                                                                                <  1:6238254/93‑1 (MQ=255)
            atatCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTTACAATGCCGCCTTTATGTGGCAGCTGGCCgaga                                                                               <  2:6307547/93‑1 (MQ=255)
             tatCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGagat                                                                              <  2:3073974/93‑1 (MQ=255)
             tatCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGagat                                                                              <  1:4598094/93‑1 (MQ=255)
              atCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGagata                                                                             <  1:932550/93‑1 (MQ=255)
              atCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGagata                                                                             <  2:6660862/93‑1 (MQ=255)
               tCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGCAGCTGGCCGagatag                                                                            <  1:1046406/93‑1 (MQ=255)
                 cATCCCAAGATGTTTAAGTTGTAACCCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGagatagat                                                                          <  1:5019359/93‑1 (MQ=255)
                   tACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGt                                                                        <  1:2245311/93‑1 (MQ=255)
                   tACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGt                                                                        >  1:1368130/1‑93 (MQ=255)
                    aCCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGtt                                                                       <  2:6238750/93‑1 (MQ=255)
                    aCCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGtt                                                                       >  2:6391001/1‑93 (MQ=255)
                      cAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGtttt                                                                     >  1:236015/1‑93 (MQ=255)
                       aaGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTc                                                                    <  2:6038450/93‑1 (MQ=255)
                        aGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTcc                                                                   >  1:2970570/1‑93 (MQ=255)
                        aGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTcc                                                                   >  2:7505533/1‑93 (MQ=255)
                         gATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCcg                                                                  >  2:653084/1‑93 (MQ=255)
                         gATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCcg                                                                  >  1:198712/1‑93 (MQ=255)
                          aTGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCcgc                                                                 <  1:6225767/93‑1 (MQ=255)
                            ttttAATTGGAAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGa                                                               <  1:1296926/92‑1 (MQ=255)
                            gTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGa                                                               >  2:3307670/1‑93 (MQ=255)
                             tttAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGAc                                                              >  2:6081540/1‑93 (MQ=255)
                             tttAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGAc                                                              >  2:7334087/1‑93 (MQ=255)
                             tttAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGAc                                                              <  2:7483711/93‑1 (MQ=255)
                              ttAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACg                                                             >  2:1087169/1‑93 (MQ=255)
                                 aGTTGAAACCCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTc                                                          <  1:1492711/93‑1 (MQ=255)
                                   ttGTACCCCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCAt                                                        <  2:174870/93‑1 (MQ=255)
                                    tGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCAtt                                                       >  1:3417203/1‑93 (MQ=255)
                                     gTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCGCCTTTATGGGGCAGCTGGCCCAGATAAATGTTTTTCGCGACGGGCCTTTc                                                     >  2:3874599/1‑93 (MQ=255)
                                      tAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTc                                                     <  1:779351/93‑1 (MQ=255)
                                      tAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTc                                                     <  1:6716803/93‑1 (MQ=255)
                                       aaccccGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTcc                                                    <  2:2627434/90‑1 (MQ=255)
                                       aaaCCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTcc                                                    <  2:5402291/93‑1 (MQ=255)
                                        aaCCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCg                                                   <  2:3114415/93‑1 (MQ=255)
                                         aCCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCgg                                                  >  2:7407552/1‑93 (MQ=255)
                                          cccGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGc                                                 >  1:6610787/1‑93 (MQ=255)
                                           ccGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCa                                                <  2:586672/93‑1 (MQ=255)
                                            cGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCAc                                               >  1:5511277/1‑93 (MQ=255)
                                            cGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCAc                                               >  2:5046348/1‑93 (MQ=255)
                                            cGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCAc                                               <  1:4463227/93‑1 (MQ=255)
                                             gCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACg                                              >  1:6161011/1‑93 (MQ=255)
                                             gCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACg                                              >  1:6858338/1‑93 (MQ=255)
                                              ccTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACga                                             >  1:3079352/1‑93 (MQ=255)
                                               cTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACgag                                            >  2:4556943/1‑93 (MQ=255)
                                               cTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACgag                                            >  2:4083257/1‑93 (MQ=255)
                                               cTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACgag                                            >  1:189297/1‑93 (MQ=255)
                                                tCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACgaga                                           >  2:5562685/1‑93 (MQ=255)
                                                tCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGCCATTTCCGGCACgaga                                           >  2:694526/1‑93 (MQ=255)
                                                 cATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGAt                                          <  1:3261783/93‑1 (MQ=255)
                                                 cATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGAt                                          <  2:6757987/93‑1 (MQ=255)
                                                 cATAATTCAGCAATGAGCAATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGCCGGTAATTTCCGGCACGAGAt                                          <  1:5888230/93‑1 (MQ=255)
                                                  aTAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATg                                         >  1:4132712/1‑93 (MQ=255)
                                                   tAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGc                                        >  2:1461766/1‑93 (MQ=255)
                                                    aaTTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCa                                       <  1:2602672/93‑1 (MQ=255)
                                                     aTTCAGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAg                                      >  2:4288771/1‑93 (MQ=255)
                                                         aGCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTcc                                  >  2:496656/1‑93 (MQ=255)
                                                          gCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCt                                 >  2:5436893/1‑93 (MQ=255)
                                                          gCAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCt                                 >  1:5174966/1‑93 (MQ=255)
                                                           cAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTg                                <  1:4675122/93‑1 (MQ=255)
                                                           cAATGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTg                                <  1:3458242/93‑1 (MQ=255)
                                                            aaTGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTgg                               >  2:922346/1‑93 (MQ=255)
                                                            aaTGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTgg                               >  1:6946038/1‑93 (MQ=255)
                                                              tGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTa                             >  1:6984633/1‑93 (MQ=255)
                                                              tGAGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTa                             >  2:5832884/1‑93 (MQ=255)
                                                                aGCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTaaa                           <  2:4802317/93‑1 (MQ=255)
                                                                 gCGATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAaat                          >  1:3116407/1‑93 (MQ=255)
                                                                   gATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAaataa                        <  1:1836446/93‑1 (MQ=255)
                                                                   gATTCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAaataa                        <  2:2384903/93‑1 (MQ=255)
                                                                     ttCACAATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATc                      <  1:2070630/93‑1 (MQ=255)
                                                                      tCACAATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCg                     <  2:247347/93‑1 (MQ=255)
                                                                       cacaATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTACCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGc                    <  1:6073422/93‑1 (MQ=255)
                                                                        acaATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGcc                   >  1:1141951/1‑93 (MQ=255)
                                                                        acaATGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGcc                   >  2:2236728/1‑93 (MQ=255)
                                                                         caATTCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCa                  >  1:38718/1‑93 (MQ=255)
                                                                         caATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCa                  >  1:4943853/1‑93 (MQ=255)
                                                                          aaTGCCTCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCAc                 <  1:737432/93‑1 (MQ=255)
                                                                          aaTGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCAc                 <  1:2944769/93‑1 (MQ=255)
                                                                          aaTGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCAc                 >  1:2833481/1‑93 (MQ=255)
                                                                           aTGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACg                >  2:4829501/1‑93 (MQ=255)
                                                                            tGCCGCCTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGc               <  2:7090885/93‑1 (MQ=255)
                                                                             gccgccTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGATCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGcc              <  2:4219377/93‑1 (MQ=255)
                                                                             gccgccTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGcc              >  1:3390662/1‑93 (MQ=255)
                                                                                gccTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCcgc           >  2:2346532/1‑93 (MQ=255)
                                                                                 ccTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCcgcg          <  2:3480307/93‑1 (MQ=255)
                                                                                 ccTTTATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCcgcg          >  1:1619451/1‑93 (MQ=255)
                                                                                   tttATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGtt        >  2:574890/1‑93 (MQ=255)
                                                                                   tttATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGtt        <  1:3989135/93‑1 (MQ=255)
                                                                                    ttATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGTTa       <  2:1651964/93‑1 (MQ=255)
                                                                                     tATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGTTaa      >  2:5102412/1‑93 (MQ=255)
                                                                                     tATGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGTTaa      <  2:1020662/93‑1 (MQ=255)
                                                                                      aTGTGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGTTAAg     <  1:4357481/93‑1 (MQ=255)
                                                                                         cGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGTTAAGtgc  >  2:1410249/1‑93 (MQ=255)
                                                                                         |                                                                                            
GTGTCCGGGTCAATATCCATACCAAGATGTTTAAGTTGTAAACCCGCCTCATAATTCAGCAATGAGCGATTCACAATGCCGCCTTTATGCGGCAGCTGGCCGAGATAGATGTTTTCCGCGACGGTCATTTCCGGCACGAGATGCAGTTCCTGGTAAATAATCGCCACGCCCGCGTTAAGTGC  >  NC_000913/1982677‑1982858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: