Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,152,717 T→C V276A (GTG→GCG)  b2074 → putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,152,7170TC84.4% 554.2 / 93.8 243V276A (GTG→GCG) b2074putative membrane protein
Reads supporting (aligned to +/- strand):  ref base T (12/26);  new base C (96/109);  total (108/135)
Fisher's exact test for biased strand distribution p-value = 1.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.94e-01

Only 100 of 249 total aligned reads displayed.

GGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCGGAAAACCG  >  NC_000913/2152627‑2152808
                                                                                          |                                                                                           
ggATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGa                                                                                           >  1:4121070/1‑93 (MQ=255)
ggATTACCGCACCAGTCGATGGGCGCGGTGGGCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGa                                                                                           >  1:1152708/1‑93 (MQ=255)
   ttACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCa                                                                                        >  2:3507/1‑93 (MQ=255)
      ccGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCAccc                                                                                     <  2:1415329/93‑1 (MQ=255)
        gCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAg                                                                                   >  1:610078/1‑93 (MQ=255)
        gCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAg                                                                                   >  1:986649/1‑93 (MQ=255)
        gCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAg                                                                                   >  2:5942195/1‑93 (MQ=255)
         cACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGa                                                                                  <  2:4342411/93‑1 (MQ=255)
          aCCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGAc                                                                                 <  1:6015482/93‑1 (MQ=255)
           ctaGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACg                                                                                >  2:2490102/3‑93 (MQ=255)
             aGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCa                                                                              <  1:847011/93‑1 (MQ=255)
              gTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCAt                                                                             <  2:6920674/93‑1 (MQ=255)
               tCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATc                                                                            >  1:5924362/1‑93 (MQ=255)
                 gATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCt                                                                          >  2:401384/1‑93 (MQ=255)
                 gATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGCAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCt                                                                          >  2:5815676/1‑93 (MQ=255)
                  aTGGTCGCGTTGGTCTCAAGCAGGTTGGTGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTa                                                                         <  1:7141522/93‑1 (MQ=255)
                  aTGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTa                                                                         <  2:7007496/93‑1 (MQ=255)
                   tGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTAt                                                                        >  2:505510/1‑93 (MQ=255)
                   tGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTAt                                                                        >  1:3290581/1‑93 (MQ=255)
                   tGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTAt                                                                        <  2:4930243/93‑1 (MQ=255)
                    ggTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATc                                                                       <  2:6316153/93‑1 (MQ=255)
                    ggTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATc                                                                       <  2:3186370/93‑1 (MQ=255)
                     gTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCg                                                                      >  2:6164835/1‑93 (MQ=255)
                      tCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGa                                                                     >  1:1002188/1‑93 (MQ=255)
                      tCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGa                                                                     <  1:4499724/93‑1 (MQ=255)
                      tCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGa                                                                     >  1:3976861/1‑93 (MQ=255)
                        gcgTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGAtt                                                                   <  2:7446822/93‑1 (MQ=255)
                        gcgTTGATCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGAtt                                                                   <  1:4730398/93‑1 (MQ=255)
                          gTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTa                                                                 <  2:1684901/93‑1 (MQ=255)
                           ttGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAg                                                                <  1:5191368/93‑1 (MQ=255)
                            tGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGt                                                               <  2:3118287/93‑1 (MQ=255)
                             ggTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTc                                                              <  2:1616426/93‑1 (MQ=255)
                              gTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACTACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCt                                                             <  2:6728498/93‑1 (MQ=255)
                              gTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCt                                                             <  2:5751881/93‑1 (MQ=255)
                              gTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCt                                                             <  2:6118672/93‑1 (MQ=255)
                               tctcAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCtt                                                            <  2:6862233/93‑1 (MQ=255)
                               tctcAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCtt                                                            <  2:4156938/93‑1 (MQ=255)
                               tctcAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCtt                                                            >  1:1243888/1‑93 (MQ=255)
                                ctcAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCttt                                                           <  1:2900325/93‑1 (MQ=255)
                                 tcAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTa                                                          <  1:112892/93‑1 (MQ=255)
                                  cAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTAc                                                         <  2:5318387/93‑1 (MQ=255)
                                   aaGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTAcc                                                        <  1:4167471/93‑1 (MQ=255)
                                    aGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTAccc                                                       <  2:3236139/93‑1 (MQ=255)
                                    aGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTAccc                                                       <  2:5208249/93‑1 (MQ=255)
                                    aGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTAccc                                                       >  1:7350619/1‑93 (MQ=255)
                                    aGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTAccc                                                       <  2:4799533/93‑1 (MQ=255)
                                    aGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTAccc                                                       >  1:1729971/1‑93 (MQ=255)
                                    aGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTAccc                                                       >  2:1140141/1‑93 (MQ=255)
                                     gCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCt                                                      >  1:6512899/1‑93 (MQ=255)
                                     gCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCt                                                      <  2:2558368/93‑1 (MQ=255)
                                       aGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGc                                                    >  2:1936420/1‑93 (MQ=255)
                                         gTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCg                                                  >  1:1396166/1‑93 (MQ=255)
                                            gATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGaa                                               >  2:2213796/1‑93 (MQ=255)
                                            gATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGaa                                               >  1:2646934/1‑93 (MQ=255)
                                             aagTTGGTAACCAAATCACCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGaaa                                              <  1:5599443/91‑1 (MQ=255)
                                              tGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAg                                             <  2:6667568/93‑1 (MQ=255)
                                                 tGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGa                                          <  2:1514599/93‑1 (MQ=255)
                                                 tGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGa                                          <  2:1005050/93‑1 (MQ=255)
                                                  ggTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGat                                         <  1:6169484/93‑1 (MQ=255)
                                                  ggTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGat                                         <  2:1226614/93‑1 (MQ=255)
                                                  ggTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGat                                         >  2:2846189/1‑93 (MQ=255)
                                                    tAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGatat                                       <  1:4805248/93‑1 (MQ=255)
                                                     aaCCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATc                                      >  1:3881584/1‑93 (MQ=255)
                                                     aaCCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATc                                      <  1:4416948/93‑1 (MQ=255)
                                                      aCCAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCg                                     >  2:1344640/1‑93 (MQ=255)
                                                       ccAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGc                                    <  1:3843307/93‑1 (MQ=255)
                                                       ccAAATCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGc                                    >  1:132371/1‑93 (MQ=255)
                                                        cAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCt                                   <  2:2806713/93‑1 (MQ=255)
                                                         aaaTCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTCTCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTa                                  <  1:7510199/93‑1 (MQ=255)
                                                         aaaTCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTa                                  >  1:2309132/1‑93 (MQ=255)
                                                         aaaTCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTa                                  >  1:2000771/1‑93 (MQ=255)
                                                          aaTCTCCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTAc                                 <  2:1714790/93‑1 (MQ=255)
                                                            tctcCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCg                               >  1:4248738/1‑93 (MQ=255)
                                                              tcCAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTa                             <  1:6935541/93‑1 (MQ=255)
                                                               ccAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAg                            <  1:3359537/93‑1 (MQ=255)
                                                               ccAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAg                            <  2:7402061/93‑1 (MQ=255)
                                                                cAGTGGTGATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGt                           >  1:3746658/1‑93 (MQ=255)
                                                                  gtggtgATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGc                         <  1:3572242/93‑1 (MQ=255)
                                                                    ggtgATACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAg                       <  1:3146434/93‑1 (MQ=255)
                                                                         tACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCa                  >  2:4461497/1‑93 (MQ=255)
                                                                         tACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCa                  >  2:4630134/1‑93 (MQ=255)
                                                                         tACCACCGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCa                  <  2:6253010/93‑1 (MQ=255)
                                                                           ccaccGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGa                <  2:3718022/93‑1 (MQ=255)
                                                                            caccGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGaa               >  2:6019802/1‑93 (MQ=255)
                                                                            caccGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGaa               <  2:5535371/93‑1 (MQ=255)
                                                                            caccGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGaa               <  1:1519916/93‑1 (MQ=255)
                                                                            caccGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGaa               >  2:7315055/1‑93 (MQ=255)
                                                                             accGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGaaa              >  1:5080443/1‑93 (MQ=255)
                                                                             accGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGaaa              <  1:5794724/93‑1 (MQ=255)
                                                                             accGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGaaa              <  1:7005950/93‑1 (MQ=255)
                                                                              ccGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAg             >  1:4911978/1‑93 (MQ=255)
                                                                              ccGGGATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAg             <  1:1855317/93‑1 (MQ=255)
                                                                                 ggATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCg          >  2:2173126/1‑93 (MQ=255)
                                                                                 ggATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCg          <  2:6798124/93‑1 (MQ=255)
                                                                                 ggATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTCTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCg          <  1:543115/93‑1 (MQ=255)
                                                                                  gATCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCgg         >  1:1648079/1‑93 (MQ=255)
                                                                                   aTCGTGGCGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCGGa        <  1:301142/93‑1 (MQ=255)
                                                                                       tggcgATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCGGAAAAc    <  1:6399616/93‑1 (MQ=255)
                                                                                       tggcgATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCGGAAAAc    <  1:2438784/93‑1 (MQ=255)
                                                                                         gtgATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCGGAAAACCg  <  2:7182589/93‑1 (MQ=255)
                                                                                          |                                                                                           
GGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCGGAAAACCG  >  NC_000913/2152627‑2152808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: