BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,202,945	C→T	G132G (GGC→GGT)	yehL →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,202,945	0	C	T	84.9%	627.7 / 74.5	245	G132G (GGC→GGT)	yehL	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (20/17); new base T (100/108); total (120/125)
Fisher's exact test for biased strand distribution p-value = 5.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.50e-02

Only 100 of 245 total aligned reads displayed.

GTTGGTGGGGGAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTCCCT  >  NC_000913/2202855‑2203035

gTTGGTGGGGGAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTgg                                                                                          <  1:3498081/93‑1 (MQ=255)

    gtggGGGAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCa                                                                                      <  2:4133487/93‑1 (MQ=255)

         ggAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTac                                                                                 <  2:3756536/93‑1 (MQ=255)

         ggAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTac                                                                                 >  2:3452304/1‑93 (MQ=255)

         ggAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTac                                                                                 <  2:2257896/93‑1 (MQ=255)

         ggAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTac                                                                                 >  1:4615629/1‑93 (MQ=255)

           aaCCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTacca                                                                               >  1:4827069/1‑93 (MQ=255)

            aCCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTaccac                                                                              <  2:4723320/93‑1 (MQ=255)

            aCCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTaccac                                                                              >  2:1784334/1‑93 (MQ=255)

            aCCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTaccac                                                                              >  2:4342004/1‑93 (MQ=255)

                  tACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACTGAAGa                                                                        <  2:4953161/93‑1 (MQ=255)

                  tACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGa                                                                        <  2:961509/93‑1 (MQ=255)

                  tACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGa                                                                        >  1:3834872/1‑93 (MQ=255)

                    ccGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGatc                                                                      >  1:2714321/1‑93 (MQ=255)

                      gCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGatcaa                                                                    >  1:967389/1‑93 (MQ=255)

                      gCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGatcaa                                                                    >  2:2898826/1‑93 (MQ=255)

                       cAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGatcaaa                                                                   <  1:6019913/93‑1 (MQ=255)

                       cAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGatcaaa                                                                   <  1:7314095/93‑1 (MQ=255)

                       cAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGatcaaa                                                                   <  1:3596809/93‑1 (MQ=255)

                       cAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGatcaaa                                                                   <  1:4048077/93‑1 (MQ=255)

                        aaaaTCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGatcaaat                                                                  >  2:1093740/1‑93 (MQ=255)

                           aTCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGatcaaatcaa                                                               >  2:247600/1‑93 (MQ=255)

                            tctcTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAg                                                              >  1:609461/1‑93 (MQ=255)

                             ctctTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGt                                                             <  2:3854683/93‑1 (MQ=255)

                              tcttctTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTa                                                            <  1:4238159/93‑1 (MQ=255)

                              tcttctTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTa                                                            >  2:5231753/1‑93 (MQ=255)

                              tcttctTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTa                                                            <  1:3812940/93‑1 (MQ=255)

                              tcttctTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTa                                                            <  1:3886077/93‑1 (MQ=255)

                               cttcttTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTAt                                                           >  2:6101139/1‑93 (MQ=255)

                               cttcttTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTAt                                                           >  1:4359945/1‑93 (MQ=255)

                               cttcttTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTAt                                                           <  2:2069229/93‑1 (MQ=255)

                               cttcttTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTAt                                                           >  2:7501515/1‑93 (MQ=255)

                                ttctttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATg                                                          >  2:6268905/1‑93 (MQ=255)

                                ttctttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATg                                                          <  2:6552963/93‑1 (MQ=255)

                                ttctttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATg                                                          <  2:6748769/93‑1 (MQ=255)

                                ttcgttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATg                                                          >  1:6976668/1‑93 (MQ=255)

                                 tctttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATgg                                                         <  1:2778833/93‑1 (MQ=255)

                                  ctttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGc                                                        <  2:4014001/93‑1 (MQ=255)

                                  ctttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGc                                                        <  1:1125632/93‑1 (MQ=255)

                                   tttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCt                                                       <  1:188201/93‑1 (MQ=255)

                                   tttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCt                                                       >  1:3306592/1‑93 (MQ=255)

                                    ttctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTg                                                      <  1:713640/93‑1 (MQ=255)

                                     tctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTgg                                                     <  1:2303253/93‑1 (MQ=255)

                                     tctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTgg                                                     <  2:1364689/93‑1 (MQ=255)

                                      ctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGa                                                    >  2:7220912/1‑93 (MQ=255)

                                      ctGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGa                                                    <  1:1961505/93‑1 (MQ=255)

                                             aCTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGc                                             >  1:5795274/1‑93 (MQ=255)

                                             aCTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGc                                             <  2:3303815/93‑1 (MQ=255)

                                               tGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACTGAAGATCAAATCAAGTATGGCTGGAACTACGccc                                           <  2:5754271/93‑1 (MQ=255)

                                               tGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGccc                                           <  1:7398204/93‑1 (MQ=255)

                                                ggCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCt                                          >  1:1653884/1‑93 (MQ=255)

                                                  cAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGc                                        >  2:5672406/1‑93 (MQ=255)

                                                   aaCCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCt                                       <  1:136070/93‑1 (MQ=255)

                                                    aCCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCtt                                      >  2:2358179/1‑93 (MQ=255)

                                                     ccGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTa                                     <  1:5788620/93‑1 (MQ=255)

                                                     ccGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTa                                     <  1:1238023/93‑1 (MQ=255)

                                                     ccGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTa                                     <  2:272434/93‑1 (MQ=255)

                                                      cGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTat                                    >  2:4462391/1‑93 (MQ=255)

                                                       gCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTatc                                   <  1:2576543/93‑1 (MQ=255)

                                                       gCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTatc                                   >  2:3062276/1‑93 (MQ=255)

                                                        cTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGGACTACGCCCTGCTTatca                                  >  1:5400321/1‑93 (MQ=255)

                                                        cTATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTatca                                  >  2:1674566/1‑93 (MQ=255)

                                                         tATTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTatcaa                                 <  2:534337/93‑1 (MQ=255)

                                                          aTTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTatcaat                                <  2:6376598/93‑1 (MQ=255)

                                                          aTTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTatcaat                                >  2:4913248/1‑93 (MQ=255)

                                                          aTTAGCGGCGATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTatcaat                                >  2:7073381/1‑93 (MQ=255)

                                                               cggcgATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATgg                           <  2:4186734/93‑1 (MQ=255)

                                                               cggcgATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATgg                           >  2:7359289/1‑93 (MQ=255)

                                                                 gcgATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTc                         <  1:3749463/93‑1 (MQ=255)

                                                                 gcgATGCCGGGTTAACCATCCAGGGTGGGGCATCAACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTc                         >  1:6417490/1‑93 (MQ=255)

                                                                 gcgATGCCGGGTTAACCATCCAGGGCGGGGCATCTCCCACCGAAGATCAAATCAGGTATGGTGGGAACTACGCCCGGCTTATAAATCAGGGTc                         <  1:3674032/93‑1 (MQ=255)

                                                                 gcgATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTc                         <  1:312232/93‑1 (MQ=255)

                                                                   gATGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCTTGGTCCg                       <  2:2390213/93‑1 (MQ=255)

                                                                   gATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCg                       >  2:5049307/1‑93 (MQ=255)

                                                                    aTGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGt                      >  2:2418019/1‑93 (MQ=255)

                                                                     tGCCGGGTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTc                     <  1:1263878/93‑1 (MQ=255)

                                                                       ccGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCaa                   <  1:4796563/93‑1 (MQ=255)

                                                                         gggTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACg                 <  1:6249869/93‑1 (MQ=255)

                                                                           gTTAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAACCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGa               <  2:4395522/93‑1 (MQ=255)

                                                                            ttAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGaa              <  2:2950811/93‑1 (MQ=255)

                                                                            ttAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGaa              <  2:153378/93‑1 (MQ=255)

                                                                            ttAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGaa              >  1:5201140/1‑93 (MQ=255)

                                                                             tAACCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAg             <  1:4883018/93‑1 (MQ=255)

                                                                              aaCCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAgc            >  2:1148835/1‑93 (MQ=255)

                                                                              aaCCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAgc            <  1:1157289/93‑1 (MQ=255)

                                                                              aaCCATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAgc            <  1:2869488/93‑1 (MQ=255)

                                                                              aaCCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTAGGCCCTGCTTATCAATCATGGTCCGTCAACGGAAgc            >  1:134224/1‑93 (MQ=255)

                                                                                 cATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCt         >  1:1002056/1‑93 (MQ=255)

                                                                                 cATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCt         >  1:6705651/1‑93 (MQ=255)

                                                                                 cATCCAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGCCCGTCAACGGAAGCGCt         >  2:692671/1‑93 (MQ=255)

                                                                                   tCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTgg       >  2:4990183/1‑93 (MQ=255)

                                                                                   tCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTgg       <  1:5956013/93‑1 (MQ=255)

                                                                                     cAGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTc     <  1:6648757/93‑1 (MQ=255)

                                                                                     cAGGGTGGGGAATCTGCCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGACCGTCAACGGAAGCGCTgctg     <  1:827998/93‑4 (MQ=255)

                                                                                      aGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTcc    <  2:6110104/93‑1 (MQ=255)

                                                                                      aGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTcc    >  1:1533065/1‑93 (MQ=255)

                                                                                      aGGGTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTcc    >  2:3743909/1‑93 (MQ=255)

                                                                                       gggTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTccc   >  1:2425572/1‑93 (MQ=255)

                                                                                       gggTGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTccc   >  1:3439635/1‑93 (MQ=255)

                                                                                        ggCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTCCCt  <  2:812353/93‑1 (MQ=255)

GTTGGTGGGGGAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTCCCT  >  NC_000913/2202855‑2203035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`