Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,211,217 A→G L483P (CTG→CCG)  yehU ← putative 2‑component sensor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,211,2170AG82.1% 576.9 / 132.6 279L483P (CTG→CCG) yehUputative 2‑component sensor protein
Reads supporting (aligned to +/- strand):  ref base A (21/29);  new base G (111/118);  total (132/147)
Fisher's exact test for biased strand distribution p-value = 4.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.95e-01

Only 100 of 284 total aligned reads displayed.

CCGGTTGATACAAACCGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCGGAATAGC  >  NC_000913/2211125‑2211308
                                                                                            |                                                                                           
   gTTGATACAAACCGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGtt                                                                                          <  2:5884954/93‑1 (MQ=255)
    ttGATACAAACCGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTtg                                                                                         >  1:3744976/1‑93 (MQ=255)
       aTACAAACCGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGa                                                                                      <  2:2694987/93‑1 (MQ=255)
       aTACAAACCGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGa                                                                                      <  2:4154059/93‑1 (MQ=255)
        tACAAACCGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGAt                                                                                     >  1:361809/1‑93 (MQ=255)
            aaCCGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTcc                                                                                 >  2:1527984/1‑93 (MQ=255)
              ccGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCa                                                                               >  1:6041693/1‑93 (MQ=255)
              ccGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCa                                                                               >  2:6868963/1‑93 (MQ=255)
               cGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCAt                                                                              >  2:6326836/1‑93 (MQ=255)
               cGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCAt                                                                              <  1:6247507/93‑1 (MQ=255)
                 gCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGGGCTGATTGCCCCTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGt                                                                            >  1:3333416/1‑93 (MQ=255)
                 gCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGt                                                                            <  2:2746985/93‑1 (MQ=255)
                 gCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGt                                                                            <  2:6844732/93‑1 (MQ=255)
                 gCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGt                                                                            <  2:1191439/93‑1 (MQ=255)
                 gCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGt                                                                            <  2:2359339/93‑1 (MQ=255)
                    ttGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCGAGCGGTTGTGATGTCCCATGTTTa                                                                         >  2:4788752/1‑93 (MQ=255)
                    ttGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTa                                                                         >  1:6587040/1‑93 (MQ=255)
                    ttGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTa                                                                         <  2:5727827/93‑1 (MQ=255)
                    ttGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTa                                                                         >  1:339788/1‑93 (MQ=255)
                      gTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAAt                                                                       <  1:930226/93‑1 (MQ=255)
                       tCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATg                                                                      <  2:2541040/93‑1 (MQ=255)
                        cTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATgg                                                                     <  2:3939946/93‑1 (MQ=255)
                        cTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATgg                                                                     <  2:6523184/93‑1 (MQ=255)
                        cTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATgg                                                                     <  1:7079780/93‑1 (MQ=255)
                        cTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATgg                                                                     >  2:898435/1‑93 (MQ=255)
                        cTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATgg                                                                     <  1:6799942/93‑1 (MQ=255)
                            gATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGtt                                                                 >  2:4636590/1‑93 (MQ=255)
                            gATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGtt                                                                 >  2:1943831/1‑93 (MQ=255)
                             ntctcCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGtnt                                                                >  2:6467272/2‑93 (MQ=255)
                             aTCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGttt                                                                >  2:5515449/1‑93 (MQ=255)
                              tctcCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGtttt                                                               <  1:5420260/93‑1 (MQ=255)
                              tctcCAGCATCAAATGTTGCCCCTCACGTCGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTc                                                              <  1:6145711/93‑1 (MQ=255)
                                  cAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCAc                                                           <  2:2176396/93‑1 (MQ=255)
                                   aGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACt                                                          >  2:2602106/1‑93 (MQ=255)
                                    gCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTa                                                         >  2:7157648/1‑93 (MQ=255)
                                    gCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTa                                                         >  1:1208307/1‑93 (MQ=255)
                                     cATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTAt                                                        >  1:5232932/1‑93 (MQ=255)
                                      aTCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATc                                                       >  1:1491956/1‑93 (MQ=255)
                                      aTCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATc                                                       <  1:4548487/93‑1 (MQ=255)
                                       tCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCg                                                      >  1:3010138/1‑93 (MQ=255)
                                          aaTGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGtt                                                   <  2:1839861/93‑1 (MQ=255)
                                            tGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGc                                                 <  2:7455640/93‑1 (MQ=255)
                                             gTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCa                                                <  2:1313593/93‑1 (MQ=255)
                                              ttGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAg                                               >  1:3488677/1‑93 (MQ=255)
                                              ttGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAg                                               <  2:3532238/93‑1 (MQ=255)
                                              ttGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAg                                               <  2:4889102/93‑1 (MQ=255)
                                                  cccTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTa                                           <  1:5182945/93‑1 (MQ=255)
                                                   ccTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTaa                                          <  2:5997308/93‑1 (MQ=255)
                                                   ccTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTaa                                          >  2:789683/1‑93 (MQ=255)
                                                   ccTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTaa                                          <  2:4057412/93‑1 (MQ=255)
                                                    cTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTaaa                                         <  1:6740219/93‑1 (MQ=255)
                                                    cTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTaaa                                         <  2:6618011/93‑1 (MQ=255)
                                                    cTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTaaa                                         >  1:167359/1‑93 (MQ=255)
                                                     tCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAAc                                        <  2:2940665/93‑1 (MQ=255)
                                                     tCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAAc                                        >  1:4928961/1‑93 (MQ=255)
                                                     tCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAAc                                        <  1:1994941/93‑1 (MQ=255)
                                                     tCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAAc                                        <  1:1577276/93‑1 (MQ=255)
                                                       aCGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAAcgc                                      <  1:1458354/93‑1 (MQ=255)
                                                       aCGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAAcgc                                      <  1:4743540/93‑1 (MQ=255)
                                                        cGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAAcgcg                                     <  1:3123472/93‑1 (MQ=255)
                                                         gTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCgg                                    <  1:4050095/93‑1 (MQ=255)
                                                         gTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCgg                                    >  2:6974824/1‑93 (MQ=255)
                                                            gggCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCa                                 >  1:133887/1‑93 (MQ=255)
                                                             ggCGCTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCaa                                <  2:3466570/93‑1 (MQ=255)
                                                             ggCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCaa                                >  1:5302112/1‑93 (MQ=255)
                                                              gcgcTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAAt                               <  1:5837944/93‑1 (MQ=255)
                                                              gcgcTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAAt                               <  1:2901719/93‑1 (MQ=255)
                                                                gcTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATtg                             <  2:2076661/93‑1 (MQ=255)
                                                                 cTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATtgc                            <  1:4663289/93‑1 (MQ=255)
                                                                 cTGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATtgc                            >  1:4817369/1‑93 (MQ=255)
                                                                  tGATTGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATtgct                           >  1:3449883/1‑93 (MQ=255)
                                                                  tGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATtgct                           <  1:1126402/93‑1 (MQ=255)
                                                                   gATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATtgctg                          >  2:5405593/1‑93 (MQ=255)
                                                                     ttGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTgctgct                        >  2:6252530/1‑93 (MQ=255)
                                                                     ttGCCACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTgctgct                        <  1:178076/93‑1 (MQ=255)
                                                                       gCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTgg                      >  1:5940274/1‑93 (MQ=255)
                                                                        ccACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTggg                     >  2:5843677/1‑93 (MQ=255)
                                                                         cACTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGa                    <  2:3106131/93‑1 (MQ=255)
                                                                         cACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGa                    <  2:2854981/93‑1 (MQ=255)
                                                                          aCTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGAt                   <  2:5171256/93‑1 (MQ=255)
                                                                          aCTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGAt                   <  1:3832555/93‑1 (MQ=255)
                                                                           cTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATa                  >  1:4367654/1‑93 (MQ=255)
                                                                           cTCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATa                  >  2:6799990/1‑93 (MQ=255)
                                                                            tCGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATaa                 <  2:2260810/93‑1 (MQ=255)
                                                                            tCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATaa                 <  2:5332670/93‑1 (MQ=255)
                                                                             cGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAAt                <  1:7376792/93‑1 (MQ=255)
                                                                             cGCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAAt                <  1:6897705/93‑1 (MQ=255)
                                                                              gCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAAtt               <  2:3276107/93‑1 (MQ=255)
                                                                              gCCCTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAAtt               <  1:4140103/93‑1 (MQ=255)
                                                                                ccTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCt             <  1:800398/93‑1 (MQ=255)
                                                                                 cTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCtt            >  2:5933457/1‑93 (MQ=255)
                                                                                 cTGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCtt            <  1:1400379/93‑1 (MQ=255)
                                                                                  tGTATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTg           >  2:6162512/1‑93 (MQ=255)
                                                                                    tATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCg         <  2:1665327/93‑1 (MQ=255)
                                                                                    tATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCg         <  2:4363676/93‑1 (MQ=255)
                                                                                    tATCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCg         <  2:3755821/93‑1 (MQ=255)
                                                                                      tCCAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCGGa       <  2:2319216/93‑1 (MQ=255)
                                                                                       ccAGCGGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCGGaa      <  2:4409212/93‑1 (MQ=255)
                                                                                        cagcggTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCGGAAt     <  1:2441869/93‑1 (MQ=255)
                                                                                           cagTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCGGAATAGc  <  1:5531258/93‑1 (MQ=255)
                                                                                            |                                                                                           
CCGGTTGATACAAACCGGCATTGTCTTCGATCTCCAGCATCAAATGTTGCCCCTCACGTCGGGCGCTGATTGCCACTCGCCCTGTATCCAGCAGTTGTGATGTCCCATGTTTAATGGCGTTTTCCACTATCGGTTGCAGGGTAAACGCGGGCAATTGCTGCTGGGATAATTCTTGCGGAATAGC  >  NC_000913/2211125‑2211308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: