Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,218,895 T→C D372G (GAC→GGC)  bglX ← beta‑D‑glucoside glucohydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,218,8950TC88.7% 646.1 / 62.1 248D372G (GAC→GGC) bglXbeta‑D‑glucoside glucohydrolase
Reads supporting (aligned to +/- strand):  ref base T (9/19);  new base C (83/137);  total (92/156)
Fisher's exact test for biased strand distribution p-value = 6.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 249 total aligned reads displayed.

CGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCC  >  NC_000913/2218803‑2218984
                                                                                            |                                                                                         
    aCGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGa                                                                                       >  2:1348860/1‑93 (MQ=255)
     cGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGAc                                                                                      <  1:5572913/93‑1 (MQ=255)
       gTTTTTCAGCAACACCAAGCTTTCGCGCGCCCCTTCACGCGCTTCTTTACGGTGCAGGCGTCTTTCGGCATTGGTATCCACCGGGCCAGActc                                                                                    <  1:6469146/93‑1 (MQ=255)
       gTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGActc                                                                                    <  1:691015/93‑1 (MQ=255)
        tttttCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCTCCGGGCCAGActct                                                                                   <  2:5189490/93‑1 (MQ=255)
        tttttCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGActct                                                                                   <  2:5573742/93‑1 (MQ=255)
        tttttCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGActct                                                                                   >  2:4448169/1‑93 (MQ=255)
          tttCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCttt                                                                                 <  2:4037003/93‑1 (MQ=255)
           ttCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTc                                                                                <  1:1609341/93‑1 (MQ=255)
            tCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCg                                                                               >  1:2491546/1‑93 (MQ=255)
             cAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCgg                                                                              <  2:1795158/93‑1 (MQ=255)
               gCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGcc                                                                            >  2:1578025/1‑93 (MQ=255)
               gCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGcc                                                                            <  1:3494617/93‑1 (MQ=255)
                cAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGccc                                                                           <  1:1204378/93‑1 (MQ=255)
                cAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGccc                                                                           <  1:6701135/93‑1 (MQ=255)
                  acacCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCa                                                                         >  2:5753692/1‑93 (MQ=255)
                  acacCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCa                                                                         >  2:5373504/1‑93 (MQ=255)
                  acacCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCa                                                                         >  1:6037634/1‑93 (MQ=255)
                  acacCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCa                                                                         >  2:2350271/1‑93 (MQ=255)
                    cccAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCaaa                                                                       <  2:2436833/92‑1 (MQ=255)
                    acCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCaaa                                                                       <  2:4494327/93‑1 (MQ=255)
                     ccAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAAt                                                                      <  1:1937918/93‑1 (MQ=255)
                      cAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATg                                                                     <  2:4329646/93‑1 (MQ=255)
                       aaGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATgg                                                                    >  2:7072296/1‑93 (MQ=255)
                       aaGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATgg                                                                    >  2:3723196/1‑93 (MQ=255)
                         gCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCt                                                                  <  1:2624507/93‑1 (MQ=255)
                         gCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCt                                                                  <  1:6776233/93‑1 (MQ=255)
                            ttCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTa                                                               <  2:7104967/93‑1 (MQ=255)
                             tCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTAt                                                              <  1:5463424/93‑1 (MQ=255)
                              cgcgcgCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATg                                                             <  1:209779/93‑1 (MQ=255)
                              cgcgcgCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATg                                                             <  2:2119256/93‑1 (MQ=255)
                               gcgcgcCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATgg                                                            >  1:7118931/1‑93 (MQ=255)
                                cgcgcCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATggg                                                           >  1:6519741/1‑93 (MQ=255)
                                cgcgcCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATggg                                                           <  2:1758270/93‑1 (MQ=255)
                                      aCTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTa                                                     >  1:5960607/1‑93 (MQ=255)
                                      aCTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTa                                                     <  1:7438682/93‑1 (MQ=255)
                                       cTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTaa                                                    >  2:2827206/1‑93 (MQ=255)
                                        ttCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTaaa                                                   <  2:6314979/93‑1 (MQ=255)
                                        ttCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTaaa                                                   <  1:6984839/93‑1 (MQ=255)
                                        ttCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTaaa                                                   >  1:6081716/1‑93 (MQ=255)
                                         tCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAaac                                                  <  2:2745555/93‑1 (MQ=255)
                                         tCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAaac                                                  >  1:3864594/1‑93 (MQ=255)
                                              cgcTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAAccc                                             <  2:6934765/93‑1 (MQ=255)
                                               gcTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAAcccc                                            <  2:2168483/93‑1 (MQ=255)
                                                cttcttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCca                                           <  1:5346850/93‑1 (MQ=255)
                                                cttcttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCca                                           <  1:4681143/93‑1 (MQ=255)
                                                cttcttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCca                                           <  2:5509988/93‑1 (MQ=255)
                                                 ttcttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcat                                          >  1:4888808/1‑93 (MQ=255)
                                                 ttcttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcat                                          <  2:1504774/93‑1 (MQ=255)
                                                 ttcttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcat                                          <  1:2895811/93‑1 (MQ=255)
                                                  tcttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcata                                         <  2:1026278/93‑1 (MQ=255)
                                                   cttTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatat                                        >  1:2449199/1‑93 (MQ=255)
                                                    tttACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatatc                                       <  2:121212/93‑1 (MQ=255)
                                                    tttACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatatc                                       <  1:3027739/93‑1 (MQ=255)
                                                    tttACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatatc                                       >  1:1963843/1‑93 (MQ=255)
                                                     ttACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatatca                                      <  2:3231303/93‑1 (MQ=255)
                                                      tACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatatcat                                     <  2:2898783/93‑1 (MQ=255)
                                                       aCGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatatcata                                    <  1:2053455/93‑1 (MQ=255)
                                                       aCGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatatcata                                    <  1:2340674/93‑1 (MQ=255)
                                                        cGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCcatatcatat                                   <  2:4266077/93‑1 (MQ=255)
                                                         ggTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATAtt                                  <  1:3730219/93‑1 (MQ=255)
                                                           tGCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTa                                <  2:5876089/93‑1 (MQ=255)
                                                            gCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTaa                               <  1:5796227/93‑1 (MQ=255)
                                                            gCAGGCGGCTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTaa                               <  1:3570852/93‑1 (MQ=255)
                                                               ggcggcTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGt                            <  1:1789459/93‑1 (MQ=255)
                                                               ggcggcTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGt                            >  1:4065183/1‑93 (MQ=255)
                                                               ggcggcTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGt                            >  2:6764257/1‑93 (MQ=255)
                                                                  ggcTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCa                         <  1:2182945/93‑1 (MQ=255)
                                                                  ggcTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCa                         <  2:1095352/93‑1 (MQ=255)
                                                                  ggcTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCa                         >  1:5728317/1‑93 (MQ=255)
                                                                   gcTTTCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAg                        <  2:5144689/93‑1 (MQ=255)
                                                                     tttCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTa                      <  1:2141643/93‑1 (MQ=255)
                                                                      ttCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTAc                     >  2:1985540/1‑93 (MQ=255)
                                                                      ttCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTAc                     <  2:3477571/93‑1 (MQ=255)
                                                                       tCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACa                    <  2:6051025/93‑1 (MQ=255)
                                                                       tCGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACa                    >  1:318648/1‑93 (MQ=255)
                                                                        cGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACAt                   <  2:3816348/93‑1 (MQ=255)
                                                                        cGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACAt                   <  2:2290921/93‑1 (MQ=255)
                                                                        cGGCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACAt                   <  1:6365254/93‑1 (MQ=255)
                                                                         ggCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATg                  <  1:4416803/93‑1 (MQ=255)
                                                                         ggCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATg                  <  1:2737506/93‑1 (MQ=255)
                                                                         ggCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATg                  <  1:5520048/93‑1 (MQ=255)
                                                                         ggCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATg                  >  2:3443987/1‑93 (MQ=255)
                                                                          gCATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATgg                 <  1:5923852/93‑1 (MQ=255)
                                                                           cATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCGGTACATGGc                <  1:4931457/93‑1 (MQ=255)
                                                                           cATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGc                <  1:366030/93‑1 (MQ=255)
                                                                           cATTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGc                <  2:3330570/93‑1 (MQ=255)
                                                                            aTTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCg               <  1:6303376/93‑1 (MQ=255)
                                                                            aTTGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCg               <  2:804230/93‑1 (MQ=255)
                                                                             ttGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCgg              <  2:2610323/93‑1 (MQ=255)
                                                                             ttGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCgg              <  2:654744/93‑1 (MQ=255)
                                                                             ttGGTATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCgg              <  1:1403141/93‑1 (MQ=255)
                                                                                 tATCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGgcag          >  2:1902786/1‑93 (MQ=255)
                                                                                  aTCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGgcagc         <  2:5452627/93‑1 (MQ=255)
                                                                                   tCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGgcagca        >  2:6296916/1‑93 (MQ=255)
                                                                                   tCCACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGgcagca        <  1:725647/93‑1 (MQ=255)
                                                                                    ccACCGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCAt       <  2:6481612/93‑1 (MQ=255)
                                                                                        cGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTc   >  2:7439396/1‑93 (MQ=255)
                                                                                        cGGGCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTc   <  1:106976/93‑1 (MQ=255)
                                                                                         gggCCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTcc  >  2:6204285/1‑93 (MQ=255)
                                                                                            |                                                                                         
CGAGACGGTTTTTCAGCAACACCAAGCTTTCGCGCGCCACTTCACGCGCTTCTTTACGGTGCAGGCGGCTTTCGGCATTGGTATCCACCGGGTCAGACTCTTTCGGCCCCAAATGGCTGTATGGGTCGTTAAACAACCCCATATCATATTTAACGTTCAGTACATGGCGGGCAGCATCGTCC  >  NC_000913/2218803‑2218984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: