Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,296,868 G→A A244V (GCC→GTC)  napH ← ferredoxin‑type protein: electron transfer

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,296,8680GA77.1% 552.6 / 138.6 262A244V (GCC→GTC) napHferredoxin‑type protein: electron transfer
Reads supporting (aligned to +/- strand):  ref base G (24/36);  new base A (94/108);  total (118/144)
Fisher's exact test for biased strand distribution p-value = 3.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.69e-01

Only 100 of 272 total aligned reads displayed.

ATACATCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTAATCACA  >  NC_000913/2296776‑2296957
                                                                                            |                                                                                         
aTACATCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCgggg                                                                                           >  1:4779574/1‑93 (MQ=255)
aTACATCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCgggg                                                                                           >  1:6096325/1‑93 (MQ=255)
 tACATCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGc                                                                                          >  2:1982158/1‑93 (MQ=255)
  aCATCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACa                                                                                         >  2:5127219/1‑93 (MQ=255)
   cATCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGacac                                                                                        >  2:6390257/1‑93 (MQ=255)
    aTCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACg                                                                                       >  2:298695/1‑93 (MQ=255)
    aTCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACg                                                                                       <  2:6460690/93‑1 (MQ=255)
     tCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGt                                                                                      >  2:5435320/1‑93 (MQ=255)
     tCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGGGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGt                                                                                      >  1:5076431/1‑93 (MQ=255)
      ccTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTa                                                                                     <  2:5869833/93‑1 (MQ=255)
      ccTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTa                                                                                     <  2:4588528/93‑1 (MQ=255)
       cTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAg                                                                                    <  2:6882520/93‑1 (MQ=255)
       cTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAg                                                                                    >  1:3076853/1‑93 (MQ=255)
        tCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGc                                                                                   >  2:354569/1‑93 (MQ=255)
         cAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGca                                                                                  <  1:4601885/93‑1 (MQ=255)
          aGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGcac                                                                                 >  2:2145768/1‑93 (MQ=255)
          aGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGcac                                                                                 <  1:2439022/93‑1 (MQ=255)
           gAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGcaca                                                                                >  1:7340585/1‑93 (MQ=255)
            aaCAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACAt                                                                               >  1:6899176/1‑93 (MQ=255)
            aaCAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACAt                                                                               <  2:5708538/93‑1 (MQ=255)
            aaCAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACAt                                                                               <  1:6425364/93‑1 (MQ=255)
              cAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGc                                                                             <  1:4878321/93‑1 (MQ=255)
               aGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCg                                                                            >  1:4723234/1‑93 (MQ=255)
                 aCATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGt                                                                          >  2:4221190/1‑93 (MQ=255)
                 aCATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGt                                                                          <  1:6605462/93‑1 (MQ=255)
                   aTCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTc                                                                        <  1:3938181/93‑1 (MQ=255)
                   aTCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTc                                                                        <  2:1540127/93‑1 (MQ=255)
                    tCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTcc                                                                       <  1:971404/93‑1 (MQ=255)
                    tCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTcc                                                                       <  2:658265/93‑1 (MQ=255)
                    tCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTcc                                                                       >  1:1793695/1‑93 (MQ=255)
                      cACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCgg                                                                     <  2:3074023/93‑1 (MQ=255)
                       aCGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCggg                                                                    <  2:596982/93‑1 (MQ=255)
                       aCGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCggg                                                                    >  1:5485904/1‑93 (MQ=255)
                        cGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGc                                                                   >  1:79251/1‑93 (MQ=255)
                          cAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCaa                                                                 <  2:4404330/93‑1 (MQ=255)
                          cAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCaa                                                                 >  2:4060307/1‑93 (MQ=255)
                            gCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAAc                                                               <  1:6812670/93‑1 (MQ=255)
                             cGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACa                                                              <  1:2099179/93‑1 (MQ=255)
                               aCCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATg                                                            <  1:1004882/93‑1 (MQ=255)
                               aCCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATg                                                            >  2:4184710/1‑93 (MQ=255)
                               aCCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATg                                                            >  2:2666934/1‑93 (MQ=255)
                                ccGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGa                                                           <  1:4529751/93‑1 (MQ=255)
                                 cGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGaa                                                          <  1:2615149/93‑1 (MQ=255)
                                 cGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGaa                                                          >  1:6466815/1‑93 (MQ=255)
                                  gCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGaaa                                                         <  1:6242070/93‑1 (MQ=255)
                                      gTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACaa                                                     >  1:5322553/1‑93 (MQ=255)
                                      gTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACaa                                                     <  2:6781334/93‑1 (MQ=255)
                                       tCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAAt                                                    >  2:7316178/1‑93 (MQ=255)
                                        cATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATc                                                   >  1:855302/1‑93 (MQ=255)
                                         aTGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATcc                                                  >  2:2123626/1‑93 (MQ=255)
                                         aTGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATcc                                                  >  1:4223228/1‑93 (MQ=255)
                                          tGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCa                                                 <  1:4173615/93‑1 (MQ=255)
                                          tGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCa                                                 <  1:525050/93‑1 (MQ=255)
                                          tGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCa                                                 >  1:1488834/1‑93 (MQ=255)
                                           gCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCAt                                                <  2:6193771/93‑1 (MQ=255)
                                           gCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCAt                                                <  1:6766819/93‑1 (MQ=255)
                                           gCAATCGCGGCTGGTGACCTGCAACGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCAt                                                >  1:2962202/1‑93 (MQ=255)
                                             aaTCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATAc                                              <  2:334525/93‑1 (MQ=255)
                                             aaTCGCAGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATAc                                              <  1:2199606/93‑1 (MQ=255)
                                              aTCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACa                                             <  1:2748833/93‑1 (MQ=255)
                                              aTCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACa                                             >  1:4453926/1‑93 (MQ=255)
                                                  cgGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCgg                                         >  2:3841821/1‑93 (MQ=255)
                                                    gCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGtt                                       <  1:7385124/93‑1 (MQ=255)
                                                     cTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTa                                      <  2:3688525/93‑1 (MQ=255)
                                                     cTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTa                                      <  2:3788074/93‑1 (MQ=255)
                                                     cTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTa                                      <  2:3130963/93‑1 (MQ=255)
                                                        gTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACAt                                   >  2:2630337/1‑93 (MQ=255)
                                                        gTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACAt                                   <  1:1234252/93‑1 (MQ=255)
                                                           aCCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTc                                <  1:1062/93‑1 (MQ=255)
                                                           aCCTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTc                                <  1:6773575/93‑1 (MQ=255)
                                                            ccTGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCt                               >  1:4884102/1‑93 (MQ=255)
                                                              tGCACCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGc                             <  2:1855530/93‑1 (MQ=255)
                                                               gCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGcc                            >  1:1096584/1‑93 (MQ=255)
                                                                 aCCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGa                          <  2:3461899/93‑1 (MQ=255)
                                                                 aCCGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGa                          <  1:3255801/93‑1 (MQ=255)
                                                                  ccGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGAt                         >  2:753047/1‑93 (MQ=255)
                                                                  ccGGGCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGAt                         <  2:1448836/93‑1 (MQ=255)
                                                                      gCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGt                     >  1:3529831/1‑93 (MQ=255)
                                                                      gCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGt                     >  2:1144446/1‑93 (MQ=255)
                                                                      gCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGt                     >  2:484963/1‑93 (MQ=255)
                                                                      gCTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCCATCGGt                     <  2:6987209/93‑1 (MQ=255)
                                                                       cTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTg                    <  1:5946584/93‑1 (MQ=255)
                                                                       cTTTGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTg                    >  2:1620356/1‑93 (MQ=255)
                                                                        tttGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTgg                   >  2:5740164/1‑93 (MQ=255)
                                                                         ttGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGc                  <  2:2809936/93‑1 (MQ=255)
                                                                         ttGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGc                  >  2:1781425/1‑93 (MQ=255)
                                                                         ttGTTCATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGc                  <  2:3813189/93‑1 (MQ=255)
                                                                              cATCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCaa             <  1:3660390/93‑1 (MQ=255)
                                                                                tCCCGCGCCGGGACACGTGGCGCATGCGGTTTCGGGCAAAAATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACg           <  1:5584626/93‑1 (MQ=255)
                                                                                tCCAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACg           <  1:3163364/93‑1 (MQ=255)
                                                                                  cAGCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGt         >  1:12132/1‑93 (MQ=255)
                                                                                    gCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTaa       <  1:7411916/93‑1 (MQ=255)
                                                                                    gCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTaa       <  2:3963562/93‑1 (MQ=255)
                                                                                    gCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTaa       >  2:7145425/1‑93 (MQ=255)
                                                                                    gCACCGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTaa       <  2:2484819/93‑1 (MQ=255)
                                                                                      aCCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTAATc     >  2:208114/1‑93 (MQ=255)
                                                                                       ccGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTAATca    >  1:376430/1‑93 (MQ=255)
                                                                                        cGGGACACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTAATcac   >  2:848005/1‑93 (MQ=255)
                                                                                         gggaCACGTAGCACTTGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTAATcaca  >  1:3874825/1‑93 (MQ=255)
                                                                                         gggaCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTAATcaca  >  1:5974226/1‑93 (MQ=255)
                                                                                            |                                                                                         
ATACATCCTCAGAACAGACATCCACGCAGCGACCGCACGTCATGCAATCGCGGCTGGTGACCTGCACCGGGCTTTGTTCATCCAGCACCGGGGCACGTAGCACATGCGGTTCCGGGCAAACATGAAAACAATCCATACAGCGGTTACATTTCTGCCGATCGGTGGCCGCAACGGTAATCACA  >  NC_000913/2296776‑2296957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: