BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,355,276	T→C	V118A (GTG→GCG)	yfaD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,355,276	0	T	C	82.9%	558.8 / 104.0	257	V118A (GTG→GCG)	yfaD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (22/22); new base C (116/97); total (138/119)
Fisher's exact test for biased strand distribution p-value = 6.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 265 total aligned reads displayed.

AAAAGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGCCCGGCA  >  NC_000913/2355186‑2355366

aaaaGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGgcgc                                                                                          >  2:6293015/1‑93 (MQ=255)

 aaaGAATATGGCTTTTCGCCTAATGCCCTATGCCCTTGCCGCCATGCAGCGTCACAAGGCCAAAGGCTATGACAGAGTCCCGCTGGTGGTGcc                                                                                         >  2:370222/1‑93 (MQ=255)

  aaGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCg                                                                                        <  2:4955678/93‑1 (MQ=255)

   aGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGt                                                                                       >  2:7419025/1‑93 (MQ=255)

   aGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGt                                                                                       >  1:6795059/1‑93 (MQ=255)

   aGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGt                                                                                       >  2:3815760/1‑93 (MQ=255)

    gAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGtt                                                                                      <  1:6081091/93‑1 (MQ=255)

    gAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGtt                                                                                      >  1:557054/1‑93 (MQ=255)

    gAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGtt                                                                                      <  1:3853043/93‑1 (MQ=255)

    gAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGtt                                                                                      <  2:4883238/93‑1 (MQ=255)

      atatGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGc                                                                                    >  2:3677211/1‑93 (MQ=255)

      atatGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGc                                                                                    >  1:4267000/1‑93 (MQ=255)

        atGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTg                                                                                  <  2:4642703/93‑1 (MQ=255)

        atGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTg                                                                                  >  2:5100688/1‑93 (MQ=255)

           gCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGttt                                                                               <  2:3093799/93‑1 (MQ=255)

           gCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGttt                                                                               <  1:1012930/93‑1 (MQ=255)

           gCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGttt                                                                               >  2:1510046/1‑93 (MQ=255)

           gCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGttt                                                                               >  2:7062403/1‑93 (MQ=255)

            cTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGtttt                                                                              <  1:5887121/93‑1 (MQ=255)

             ttttCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTa                                                                             <  2:5534214/93‑1 (MQ=255)

             ttttCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTa                                                                             >  2:198075/1‑93 (MQ=255)

             ttttCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTa                                                                             >  2:7017129/1‑93 (MQ=255)

             ttttCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTa                                                                             >  1:6865298/1‑93 (MQ=255)

               ttCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATc                                                                           <  2:1432835/93‑1 (MQ=255)

                tCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCa                                                                          >  2:4144010/1‑93 (MQ=255)

                tCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCa                                                                          <  2:2404041/93‑1 (MQ=255)

                tCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCa                                                                          <  1:5298519/93‑1 (MQ=255)

                 ccgCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCAt                                                                         <  1:649027/91‑1 (MQ=255)

                 cGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCAt                                                                         <  1:149094/93‑1 (MQ=255)

                 cGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCAt                                                                         <  1:5822532/93‑1 (MQ=255)

                  ggCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATg                                                                        >  1:1985921/1‑93 (MQ=255)

                  ggCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATg                                                                        >  2:2810835/1‑93 (MQ=255)

                  ggCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATg                                                                        >  2:4191795/1‑93 (MQ=255)

                    cTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGc                                                                      <  1:7511881/93‑1 (MQ=255)

                    cTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGc                                                                      >  1:7136953/1‑93 (MQ=255)

                    cTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGc                                                                      <  2:1175115/93‑1 (MQ=255)

                     tAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCg                                                                     >  1:2668490/1‑93 (MQ=255)

                     tAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCg                                                                     >  1:4167340/1‑93 (MQ=255)

                      aaTGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGa                                                                    >  1:5435884/1‑93 (MQ=255)

                      aaTGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGa                                                                    <  1:1885478/93‑1 (MQ=255)

                      aaTGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGa                                                                    <  2:5652688/93‑1 (MQ=255)

                        tGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGaaa                                                                  >  2:4317434/1‑93 (MQ=255)

                         gcgcTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAAc                                                                 >  2:2760006/1‑93 (MQ=255)

                              aTGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGc                                                            >  1:4016778/1‑93 (MQ=255)

                               tGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGcc                                                           <  1:2225842/93‑1 (MQ=255)

                               tGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGcc                                                           <  2:1793146/93‑1 (MQ=255)

                                gCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCt                                                          >  1:1134924/1‑93 (MQ=255)

                                gCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCt                                                          >  2:5993016/1‑93 (MQ=255)

                                  cACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTa                                                        >  1:3619638/1‑93 (MQ=255)

                                  cACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTa                                                        >  2:1604930/1‑93 (MQ=255)

                                   aCTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTAc                                                       >  1:4654404/1‑93 (MQ=255)

                                   aCTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTAc                                                       <  2:2620658/93‑1 (MQ=255)

                                   aCTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTAc                                                       >  2:6795786/1‑93 (MQ=255)

                                    cTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTAcc                                                      >  1:451946/1‑93 (MQ=255)

                                     tGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTAccc                                                     >  1:650216/1‑93 (MQ=255)

                                      gccgccATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCg                                                    <  2:6560984/93‑1 (MQ=255)

                                       ccgccATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGt                                                   >  1:7442603/1‑93 (MQ=255)

                                       ccgccATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGt                                                   <  1:6391969/93‑1 (MQ=255)

                                        cgccATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTa                                                  <  1:4822301/93‑1 (MQ=255)

                                          ccATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTact                                                >  2:1072676/1‑93 (MQ=255)

                                          ccATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTact                                                <  1:2849329/93‑1 (MQ=255)

                                          ccATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTact                                                >  1:7367351/1‑93 (MQ=255)

                                            aTGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTactca                                              >  1:1776335/1‑93 (MQ=255)

                                            aTGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTactca                                              <  1:6930460/93‑1 (MQ=255)

                                             tGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTactcac                                             >  2:2127261/1‑93 (MQ=255)

                                              gCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTactcact                                            >  2:2490614/1‑93 (MQ=255)

                                               cAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTactcactc                                           <  1:3528752/93‑1 (MQ=255)

                                                 gCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCaa                                         >  2:3910845/1‑93 (MQ=255)

                                                  cGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAAc                                        <  2:5407786/93‑1 (MQ=255)

                                                   gTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAAct                                       <  1:3675628/93‑1 (MQ=255)

                                                    tCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAActg                                      <  2:3487501/93‑1 (MQ=255)

                                                       ccAGGACAAAGGCTCTGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAActggct                                   >  2:6451280/1‑93 (MQ=255)

                                                       ccAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAActggct                                   <  1:1732844/93‑1 (MQ=255)

                                                        cAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAActggctg                                  >  1:2577599/1‑93 (MQ=255)

                                                        cAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAActggctg                                  >  1:1814011/1‑93 (MQ=255)

                                                         aGGACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAActggctgg                                 >  1:4627692/1‑93 (MQ=255)

                                                          ggACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGa                                >  1:3066024/1‑93 (MQ=255)

                                                           gACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGAt                               >  2:6267017/1‑93 (MQ=255)

                                                           gACAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGAt                               <  2:410729/93‑1 (MQ=255)

                                                             cAAAGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGa                             >  1:943795/1‑93 (MQ=255)

                                                               aaGGCTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGt                           <  2:1478707/93‑1 (MQ=255)

                                                                aGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGtt                          <  1:2066291/93‑1 (MQ=255)

                                                                 ggCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGttt                         <  2:5142844/93‑1 (MQ=255)

                                                                   cTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGa                       <  2:3612868/93‑1 (MQ=255)

                                                                   cTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGa                       <  1:2156956/93‑1 (MQ=255)

                                                                   cTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGa                       <  1:1246578/93‑1 (MQ=255)

                                                                   cTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGa                       <  1:3818355/93‑1 (MQ=255)

                                                                   cTATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGa                       <  2:1229381/93‑1 (MQ=255)

                                                                    tATGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGAc                      >  2:3179529/1‑93 (MQ=255)

                                                                      tGACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGa                    >  1:2970824/1‑93 (MQ=255)

                                                                       gACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGAt                   >  1:5023046/1‑93 (MQ=255)

                                                                       gACAGAGTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGAt                   >  1:1377534/1‑93 (MQ=255)

                                                                             gTCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCaa             >  1:1970730/1‑93 (MQ=255)

                                                                              tCCCGCTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAAc            >  2:225228/1‑93 (MQ=255)

                                                                                  gCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGc        >  2:6849634/1‑93 (MQ=255)

                                                                                   cTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGcc       <  2:5060124/93‑1 (MQ=255)

                                                                                   cTGGTGGCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGcc       >  1:6131437/1‑93 (MQ=255)

                                                                                    tggtggTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGccc      >  2:2337544/1‑93 (MQ=255)

                                                                                    tggtggCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGccc      >  2:7179229/1‑93 (MQ=255)

                                                                                    tggtggCGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGccc      <  2:754617/93‑1 (MQ=255)

AAAAGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGCCCGGCA  >  NC_000913/2355186‑2355366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`