Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 253,831 T→C Y44H (TAT→CAT)  prfH → putative peptide chain release factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913253,8310TC84.6% 617.9 / 107.2 273Y44H (TAT→CAT) prfHputative peptide chain release factor
Reads supporting (aligned to +/- strand):  ref base T (22/20);  new base C (129/102);  total (151/122)
Fisher's exact test for biased strand distribution p-value = 7.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.12e-01

Only 100 of 274 total aligned reads displayed.

CGTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTATGAG  >  NC_000913/253741‑253923
                                                                                           |                                                                                            
 gTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATc                                                                                           <  2:6514910/93‑1 (MQ=255)
 gTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGATGTGGCACTCTTCAGTGGATTTGTCCGAGTCCGCATc                                                                                           >  2:3619143/1‑93 (MQ=255)
     ggCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGcc                                                                                       >  2:5585817/1‑93 (MQ=255)
      gcgcTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCt                                                                                      >  1:6331952/1‑93 (MQ=255)
        gcTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCtca                                                                                    <  1:7527220/93‑1 (MQ=255)
        gcTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCtca                                                                                    >  1:3995900/1‑93 (MQ=255)
         cTGGTTTCTCTCGATGGCGATAACGCATGGGGATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCtcat                                                                                   >  1:4487977/1‑93 (MQ=255)
          tGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCCGAGTCCGTATCGGCCtcat                                                                                   <  1:1149313/93‑1 (MQ=255)
          tGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCtcatc                                                                                  >  2:4982406/1‑93 (MQ=255)
          tGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCtcatc                                                                                  >  1:2633947/1‑93 (MQ=255)
          tGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCtcatc                                                                                  >  2:3189132/1‑93 (MQ=255)
           ggTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCtcatca                                                                                 <  1:1263473/93‑1 (MQ=255)
           ggTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCtcatca                                                                                 <  1:2096078/93‑1 (MQ=255)
           ggTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCtcatca                                                                                 <  2:4563336/93‑1 (MQ=255)
           ggTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCtcatca                                                                                 <  2:3703699/93‑1 (MQ=255)
            gTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTcatcat                                                                                <  1:608737/93‑1 (MQ=255)
            gTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTcatcat                                                                                >  1:3489661/1‑93 (MQ=255)
             tttCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATg                                                                               >  1:3514817/1‑93 (MQ=255)
                ctctcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGgc                                                                            <  1:3704878/93‑1 (MQ=255)
                  ctggATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGgcgc                                                                          >  2:4734785/4‑93 (MQ=255)
                   tcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCa                                                                         >  1:5052323/1‑93 (MQ=255)
                   tcGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCa                                                                         >  2:2025316/1‑93 (MQ=255)
                     gATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCaaa                                                                       >  1:5444519/1‑93 (MQ=255)
                      aTGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCaaaa                                                                      >  2:3552506/1‑93 (MQ=255)
                         gCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACt                                                                   >  2:4619283/1‑93 (MQ=255)
                           gATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCAGCCTCATCATGGGCGCAAAAACTgg                                                                 <  2:2468454/93‑1 (MQ=255)
                             tAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGtt                                                               <  2:4959650/93‑1 (MQ=255)
                             tAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGtt                                                               >  1:5481100/1‑93 (MQ=255)
                              aaCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGttt                                                              >  2:2950258/1‑93 (MQ=255)
                              aaCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGttt                                                              <  2:7461060/93‑1 (MQ=255)
                              aaCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGttt                                                              >  2:6111928/1‑93 (MQ=255)
                               aCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTc                                                             <  2:7249183/93‑1 (MQ=255)
                               aCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTc                                                             <  2:2631630/93‑1 (MQ=255)
                               aCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTc                                                             <  2:83014/93‑1 (MQ=255)
                               aCGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTc                                                             <  2:5265097/93‑1 (MQ=255)
                                cGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCt                                                            <  1:3766287/93‑1 (MQ=255)
                                cGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCt                                                            <  1:1922446/93‑1 (MQ=255)
                                  cATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTgg                                                          <  1:6993011/93‑1 (MQ=255)
                                   aTGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTggg                                                         >  1:4928643/1‑93 (MQ=255)
                                   aTGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTggg                                                         >  2:1175259/1‑93 (MQ=255)
                                    tGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGc                                                        >  2:2808938/1‑93 (MQ=255)
                                    tGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGc                                                        >  1:7280069/1‑93 (MQ=255)
                                    tGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGc                                                        >  1:4676586/1‑93 (MQ=255)
                                    tGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGc                                                        >  1:3191746/1‑93 (MQ=255)
                                     gggCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCa                                                       >  1:6414467/1‑93 (MQ=255)
                                     gggCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCa                                                       <  1:7051443/93‑1 (MQ=255)
                                     gggCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCa                                                       <  2:6407487/93‑1 (MQ=255)
                                     gggCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCa                                                       <  1:4353041/93‑1 (MQ=255)
                                      ggCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCAt                                                      >  2:671855/1‑93 (MQ=255)
                                      ggCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCAt                                                      >  1:149106/1‑93 (MQ=255)
                                       gCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCAtt                                                     <  1:6174328/93‑1 (MQ=255)
                                       gCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCAtt                                                     >  2:1159917/1‑93 (MQ=255)
                                          ttAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTggg                                                  <  1:4599801/93‑1 (MQ=255)
                                           tAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGc                                                 >  2:2060813/1‑93 (MQ=255)
                                             aGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGt                                               >  1:3066417/1‑93 (MQ=255)
                                              gCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGtt                                              >  1:6654092/1‑93 (MQ=255)
                                               cGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGttt                                             >  1:4467785/1‑93 (MQ=255)
                                               cGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGttt                                             <  2:2998076/93‑1 (MQ=255)
                                                gAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGtttt                                            >  2:4354987/1‑93 (MQ=255)
                                                  aaGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTAc                                          <  2:6292007/93‑1 (MQ=255)
                                                  aaGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTAc                                          <  2:2235818/93‑1 (MQ=255)
                                                    gCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCg                                        >  1:4955625/1‑93 (MQ=255)
                                                      tGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCt                                      >  1:137499/1‑93 (MQ=255)
                                                          gtgGCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCtgatg                                  <  2:6143291/93‑1 (MQ=255)
                                                            ggCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAg                                <  2:5641312/93‑1 (MQ=255)
                                                             gCACTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGc                               >  2:5742399/1‑93 (MQ=255)
                                                               aCTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAg                             <  2:4217092/93‑1 (MQ=255)
                                                               aCTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAg                             <  2:166517/93‑1 (MQ=255)
                                                                cTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAgg                            >  1:2461716/1‑93 (MQ=255)
                                                                cTATTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAgg                            >  1:1019633/1‑93 (MQ=255)
                                                                  aTTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGaa                          >  1:2515355/1‑93 (MQ=255)
                                                                  aTTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGaa                          <  1:2681035/93‑1 (MQ=255)
                                                                  aTTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGaa                          >  1:5857440/1‑93 (MQ=255)
                                                                  aTTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGaa                          >  2:1014275/1‑93 (MQ=255)
                                                                  aTTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGaa                          >  2:3449306/1‑93 (MQ=255)
                                                                  aTTCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGaa                          >  2:1568352/1‑93 (MQ=255)
                                                                  aTTCAGTGGATTTGTCCAAGTCCGCATCGCCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCCCTGATGAGCAGGaa                          >  2:799895/1‑93 (MQ=255)
                                                                   ttCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAAc                         >  1:3274982/1‑93 (MQ=255)
                                                                   ttCAGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAAc                         >  2:5980720/1‑93 (MQ=255)
                                                                      aGTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAAt                      <  2:4148327/93‑1 (MQ=255)
                                                                       gTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATc                     >  1:4162754/1‑93 (MQ=255)
                                                                       gTGGATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATc                     >  2:2367420/1‑93 (MQ=255)
                                                                          gATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGa                  >  2:1470234/1‑93 (MQ=255)
                                                                          gATTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGa                  <  1:5947895/93‑1 (MQ=255)
                                                                           aTTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGAt                 <  2:4584406/93‑1 (MQ=255)
                                                                           aTTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGAt                 >  1:7200480/1‑93 (MQ=255)
                                                                           aTTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGAt                 >  2:3347167/1‑93 (MQ=255)
                                                                           aTTTGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGAt                 >  1:296703/1‑93 (MQ=255)
                                                                            tttGTCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATg                >  2:1803657/1‑93 (MQ=255)
                                                                                tCCGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAAt            <  2:5412090/93‑1 (MQ=255)
                                                                                  gcGAGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATc           <  1:2206911/92‑1 (MQ=255)
                                                                                  ccGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATc           <  2:7125283/93‑1 (MQ=255)
                                                                                    gAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCg         >  1:1686462/1‑93 (MQ=255)
                                                                                     aGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGt        >  1:5302404/1‑93 (MQ=255)
                                                                                     aGTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGt        <  1:6516129/93‑1 (MQ=255)
                                                                                      gTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGtt       >  2:5837880/1‑93 (MQ=255)
                                                                                      gTCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGtt       >  2:3896033/1‑93 (MQ=255)
                                                                                       tCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTa      <  2:1349303/93‑1 (MQ=255)
                                                                                       tCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTa      <  1:1301133/93‑1 (MQ=255)
                                                                                       tCCGCATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTa      <  1:2300646/93‑1 (MQ=255)
                                                                                           |                                                                                            
CGTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTATGAG  >  NC_000913/253741‑253923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: