Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,637,648 T→C V316V (GTA→GTG hisS ← histidine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,637,6480TC84.5% 628.1 / 100.1 271V316V (GTA→GTGhisShistidine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base T (20/22);  new base C (120/109);  total (140/131)
Fisher's exact test for biased strand distribution p-value = 6.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 271 total aligned reads displayed.

TGCCATAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCATAACG  >  NC_000913/2637558‑2637737
                                                                                          |                                                                                         
 gCCATAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACt                                                                                        >  2:2760240/1‑93 (MQ=255)
   cATAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTaa                                                                                      <  2:7211224/93‑1 (MQ=255)
    aTAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAAc                                                                                     <  1:7259294/93‑1 (MQ=255)
    aTAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAAc                                                                                     >  2:5343754/1‑93 (MQ=255)
    aTAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAAc                                                                                     >  1:5969780/1‑93 (MQ=255)
     tAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACa                                                                                    >  2:5059283/1‑93 (MQ=255)
     tAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACa                                                                                    >  1:636265/1‑93 (MQ=255)
     tAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACa                                                                                    >  1:5354400/1‑93 (MQ=255)
          gCAGATTGTGTATCCGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACa                                                                               <  2:4381706/93‑1 (MQ=255)
          gCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACa                                                                               >  2:4008910/1‑93 (MQ=255)
          gCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACa                                                                               >  2:2228139/1‑93 (MQ=255)
            aGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAg                                                                             >  1:2694653/1‑93 (MQ=255)
            aGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAg                                                                             <  1:3244935/93‑1 (MQ=255)
             gATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGa                                                                            <  1:2508559/93‑1 (MQ=255)
             gATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGa                                                                            <  2:7165906/93‑1 (MQ=255)
               ttGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACg                                                                          <  1:5049497/93‑1 (MQ=255)
               ttGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACg                                                                          >  1:4594904/1‑93 (MQ=255)
               ttGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACg                                                                          >  1:6860995/1‑93 (MQ=255)
                tgtgTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGt                                                                         <  1:1670948/93‑1 (MQ=255)
                 gtgtATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGtt                                                                        <  2:5711787/93‑1 (MQ=255)
                 gtgtATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGtt                                                                        <  1:1179692/93‑1 (MQ=255)
                   gtATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCg                                                                      <  1:2105094/93‑1 (MQ=255)
                    tATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGa                                                                     <  2:6043977/93‑1 (MQ=255)
                    tATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGa                                                                     <  2:2962999/93‑1 (MQ=255)
                    tATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGa                                                                     <  1:5388175/93‑1 (MQ=255)
                    tATCAGAACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCgc                                                                     >  2:4722156/1‑92 (MQ=255)
                      tCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAgg                                                                   >  2:6890491/1‑93 (MQ=255)
                      tCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAgg                                                                   >  1:3111618/1‑93 (MQ=255)
                        aGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGcc                                                                 <  1:2072810/93‑1 (MQ=255)
                         gCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGccc                                                                >  1:976562/1‑93 (MQ=255)
                         gCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGccc                                                                <  2:1315734/93‑1 (MQ=255)
                         gCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGccc                                                                <  1:3669865/93‑1 (MQ=255)
                            ccTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATa                                                             <  1:5750524/93‑1 (MQ=255)
                            ccTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATa                                                             >  1:3484177/1‑93 (MQ=255)
                              tGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGc                                                           >  1:7281845/1‑93 (MQ=255)
                                 aGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCaaa                                                        <  2:147903/93‑1 (MQ=255)
                                  gCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCaaaa                                                       >  2:393532/1‑93 (MQ=255)
                                    caccaGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAAcc                                                     <  1:2435354/93‑1 (MQ=255)
                                      ccaGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGa                                                   <  1:4784396/93‑1 (MQ=255)
                                      ccaGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGa                                                   <  1:6710094/93‑1 (MQ=255)
                                      ccaGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGa                                                   >  2:6988567/1‑93 (MQ=255)
                                       caGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGAc                                                  >  1:6248435/1‑93 (MQ=255)
                                       caGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGAc                                                  >  1:3055368/1‑93 (MQ=255)
                                       caGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGAc                                                  <  2:2520900/93‑1 (MQ=255)
                                       caGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGAc                                                  >  2:2123847/1‑93 (MQ=255)
                                        aGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACa                                                 <  1:2673643/93‑1 (MQ=255)
                                         ggTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAg                                                >  2:3230987/1‑93 (MQ=255)
                                         ggTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAg                                                >  1:4433764/1‑93 (MQ=255)
                                          gTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGc                                               <  2:3405494/93‑1 (MQ=255)
                                           tatataTCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGcc                                              >  1:1258258/1‑93 (MQ=255)
                                           tatataTCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGcc                                              <  1:4857140/93‑1 (MQ=255)
                                            atatatCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCg                                             <  2:3895276/93‑1 (MQ=255)
                                            atatatCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCg                                             >  2:6173116/1‑93 (MQ=255)
                                             tatatCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCgg                                            >  2:6539341/1‑93 (MQ=255)
                                             tatatCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCgg                                            >  1:5942403/1‑93 (MQ=255)
                                              atatCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGgt                                           <  2:1565182/93‑1 (MQ=255)
                                               tatCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGgtg                                          >  2:4869541/1‑93 (MQ=255)
                                               tatCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGgtg                                          >  2:3440037/1‑93 (MQ=255)
                                                   gACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGc                                      >  2:3628533/1‑93 (MQ=255)
                                                   gACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGc                                      >  2:666445/1‑93 (MQ=255)
                                                    acaacaGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCa                                     <  2:5926732/93‑1 (MQ=255)
                                                     caacaGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCAc                                    >  1:7197986/1‑93 (MQ=255)
                                                     acaaaGGATTCGCCTTAAATTCCGGAATAACCGCCTGTTCTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCAc                                    <  1:4233687/89‑1 (MQ=255)
                                                      aacaGGATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACg                                   >  2:7006840/1‑93 (MQ=255)
                                                          ggATCTGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCg                               >  1:5835399/1‑93 (MQ=255)
                                                           gATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGc                              <  2:897880/93‑1 (MQ=255)
                                                           gATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGc                              >  2:6572777/1‑93 (MQ=255)
                                                           gATCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGc                              >  2:1675632/1‑93 (MQ=255)
                                                            aTCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGATGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGcc                             >  2:4338356/1‑93 (MQ=255)
                                                            aTCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGcc                             <  1:6330984/93‑1 (MQ=255)
                                                            aTCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGcc                             <  1:4919248/93‑1 (MQ=255)
                                                             tCGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGccc                            >  2:6762061/1‑93 (MQ=255)
                                                              cGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCa                           <  2:3684469/93‑1 (MQ=255)
                                                              cGGCTTTAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCa                           >  1:7445702/1‑93 (MQ=255)
                                                                gCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAgt                         >  2:4495559/1‑93 (MQ=255)
                                                                 cTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAgtt                        >  1:1424334/1‑93 (MQ=255)
                                                                 cTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAgtt                        <  2:5103936/93‑1 (MQ=255)
                                                                   ttAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAgttgt                      <  1:1702238/93‑1 (MQ=255)
                                                                    tAAATTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAgttgtt                     >  2:4459654/1‑93 (MQ=255)
                                                                     aaaTTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTc                    >  1:4753607/1‑93 (MQ=255)
                                                                     aaaTTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTc                    <  1:3872612/93‑1 (MQ=255)
                                                                     aaaTTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTc                    <  2:4651555/93‑1 (MQ=255)
                                                                     aaaTTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTc                    <  2:1242310/93‑1 (MQ=255)
                                                                       aTTCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCca                  >  2:71363/1‑93 (MQ=255)
                                                                        ttCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCcac                 <  1:7499546/93‑1 (MQ=255)
                                                                         tCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCcaca                <  2:6339221/93‑1 (MQ=255)
                                                                         tCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCcaca                >  1:282985/1‑93 (MQ=255)
                                                                         tCCGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCcaca                >  2:2041913/1‑93 (MQ=255)
                                                                          ccGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACaa               <  2:2434211/93‑1 (MQ=255)
                                                                          ccGGATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACaa               <  2:3764437/93‑1 (MQ=255)
                                                                            ggATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGa             >  2:2885399/1‑93 (MQ=255)
                                                                            ggATTAACGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGa             >  2:1421340/1‑93 (MQ=255)
                                                                                 aaCGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTc        >  2:5682074/1‑93 (MQ=255)
                                                                                   cGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCAt      >  2:1121128/1‑93 (MQ=255)
                                                                                   cGGCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCAt      <  1:5613258/93‑1 (MQ=255)
                                                                                    ggCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCATa     >  1:393193/1‑93 (MQ=255)
                                                                                    ggCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCATa     >  1:4153035/1‑93 (MQ=255)
                                                                                     gCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCATaa    >  1:1935067/1‑93 (MQ=255)
                                                                                     gCCTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCATaa    <  2:1181296/93‑1 (MQ=255)
                                                                                       cTGCACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCATAACg  >  2:7504971/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGCCATAGCCGCAGATTGTGTATCAGCACCTGAAGCCACCAGGTATATATCGACAACAGGATCGGCTTTAAATTCCGGATTAACGGCCTGTACTAACAATACAAGACGTTCGAGGCCCATAGCAAAACCGACAGCCGGTGTTGCACGACCGCCCAGTTGTTCCACAAGACCGTCATAACG  >  NC_000913/2637558‑2637737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: