Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,830,091 T→C P99P (CCA→CCG ygaA ← putative 2‑component transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,830,0910TC86.9% 746.2 / 93.8 305P99P (CCA→CCGygaAputative 2‑component transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base T (16/24);  new base C (132/133);  total (148/157)
Fisher's exact test for biased strand distribution p-value = 3.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 306 total aligned reads displayed.

CCCAGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGTAG  >  NC_000913/2830001‑2830183
                                                                                          |                                                                                            
cccAGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTgg                                                                                            <  1:4318601/93‑1 (MQ=255)
cccAGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCgg                                                                                            <  1:5478124/93‑1 (MQ=255)
   aGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATg                                                                                         >  1:5754825/1‑93 (MQ=255)
   aGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATg                                                                                         <  1:5955727/93‑1 (MQ=255)
    ggAATCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGc                                                                                        >  1:2164960/1‑93 (MQ=255)
    ggAATCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGc                                                                                        >  2:3277611/1‑93 (MQ=255)
      aaTCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGccc                                                                                      <  2:2516036/93‑1 (MQ=255)
        tCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCtt                                                                                    >  2:4842408/1‑93 (MQ=255)
        tCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCtt                                                                                    >  1:2512894/1‑93 (MQ=255)
         cAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACAACCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTc                                                                                   <  1:4784410/93‑1 (MQ=255)
          aaaCCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTcc                                                                                  >  2:5937442/1‑93 (MQ=255)
          aaaCCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTcc                                                                                  <  1:3820568/93‑1 (MQ=255)
          aaaCCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTcc                                                                                  >  1:272303/1‑93 (MQ=255)
           aaCCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCa                                                                                 <  2:5669416/93‑1 (MQ=255)
           aaCCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCa                                                                                 >  1:247197/1‑93 (MQ=255)
             ccGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTCCAgc                                                                               <  2:1360226/93‑1 (MQ=255)
             ccGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAgc                                                                               <  1:771751/93‑1 (MQ=255)
             ccGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAgc                                                                               <  1:426350/93‑1 (MQ=255)
                tCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCa                                                                            >  2:2778982/1‑93 (MQ=255)
                  aTAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTCCAGCGCaaa                                                                          <  1:5588239/93‑1 (MQ=255)
                  aTAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCaaa                                                                          >  2:1064861/1‑93 (MQ=255)
                  aTAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCaaa                                                                          <  1:3586032/93‑1 (MQ=255)
                   tAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAg                                                                         <  1:1461231/93‑1 (MQ=255)
                   tAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAg                                                                         >  2:5366588/1‑93 (MQ=255)
                    aGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGc                                                                        <  2:5911904/93‑1 (MQ=255)
                    aGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGc                                                                        >  1:4913095/1‑93 (MQ=255)
                     gggATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCg                                                                       <  1:40596/93‑1 (MQ=255)
                      ggATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGt                                                                      >  1:845391/1‑93 (MQ=255)
                      ggATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGt                                                                      <  1:5072463/93‑1 (MQ=255)
                       gATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTc                                                                     <  1:4675993/93‑1 (MQ=255)
                         tCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTa                                                                   >  1:6207170/1‑93 (MQ=255)
                         tCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTa                                                                   <  1:167728/93‑1 (MQ=255)
                         tCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTa                                                                   <  1:5267212/93‑1 (MQ=255)
                          cGGGCAATTCGCTGTCTGCGGTAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTAc                                                                  <  2:6984238/93‑1 (MQ=255)
                          cGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTAc                                                                  <  2:2873558/93‑1 (MQ=255)
                          cGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTAc                                                                  <  2:2297427/93‑1 (MQ=255)
                           gggCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTAcc                                                                 <  2:77263/93‑1 (MQ=255)
                            ggCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTACCg                                                                <  2:1728490/93‑1 (MQ=255)
                            ggCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCg                                                                >  2:3794198/1‑93 (MQ=255)
                             gCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGa                                                               <  2:5763442/93‑1 (MQ=255)
                                aTTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAgca                                                            >  1:7221209/1‑91 (MQ=255)
                                aTTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTa                                                            <  2:5330307/93‑1 (MQ=255)
                                aTTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTa                                                            >  1:7386498/1‑93 (MQ=255)
                                 ttCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTAc                                                           >  1:1888173/1‑93 (MQ=255)
                                  tCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACa                                                          <  1:236883/93‑1 (MQ=255)
                                    gCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATc                                                        >  2:553325/1‑93 (MQ=255)
                                     cTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATcc                                                       <  1:137209/93‑1 (MQ=255)
                                      tGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCt                                                      <  1:3764276/93‑1 (MQ=255)
                                      tGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCt                                                      >  1:2299661/1‑93 (MQ=255)
                                       gTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCACAGCGTCTACCGAGGACATCCtt                                                     >  1:6582704/1‑93 (MQ=255)
                                       gTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCtt                                                     >  2:4761820/1‑93 (MQ=255)
                                          tGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGc                                                  <  2:4545186/93‑1 (MQ=255)
                                            cGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCa                                                <  1:3958594/93‑1 (MQ=255)
                                             gggAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAg                                               >  2:2436748/1‑93 (MQ=255)
                                               gAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGAc                                             <  2:4233160/93‑1 (MQ=255)
                                               gAAAGCGCACCACACCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGAc                                             <  1:5836445/93‑1 (MQ=255)
                                                aaaGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGAcc                                            <  2:6240051/93‑1 (MQ=255)
                                                   gcgcACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTc                                         <  2:2617924/93‑1 (MQ=255)
                                                   gcgcACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTc                                         <  1:4533682/93‑1 (MQ=255)
                                                     gcACCACATCCCCGGCGGGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGa                                       <  1:5310641/93‑1 (MQ=255)
                                                      caccacATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGAt                                      <  1:5093839/93‑1 (MQ=255)
                                                      caccacATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGAt                                      >  1:7280226/1‑93 (MQ=255)
                                                      caccacATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGGACATCCTTTGCCAGACCGTCGAt                                      >  2:6971339/1‑93 (MQ=255)
                                                       accacATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATg                                     >  1:2798773/1‑93 (MQ=255)
                                                        ccacATCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATgg                                    <  1:5382846/93‑1 (MQ=255)
                                                           caTCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCaa                                 <  2:515229/93‑1 (MQ=255)
                                                           caTCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCaa                                 <  2:3735538/93‑1 (MQ=255)
                                                             tCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGc                               >  1:615453/1‑93 (MQ=255)
                                                             tCCCCGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGc                               <  1:2920184/93‑1 (MQ=255)
                                                              ccccGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCg                              <  1:3390472/93‑1 (MQ=255)
                                                              ccccGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCg                              <  2:4051951/93‑1 (MQ=255)
                                                               cccGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCgg                             >  2:1864917/1‑93 (MQ=255)
                                                                ccGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGa                            >  2:4075893/1‑93 (MQ=255)
                                                                ccGGCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGa                            <  1:1361309/93‑1 (MQ=255)
                                                                 cGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTCCCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGaa                           <  1:2571250/93‑1 (MQ=255)
                                                                  ggCGCGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAAt                          <  1:2767302/93‑1 (MQ=255)
                                                                   gcgcGGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATa                         >  2:3621881/1‑93 (MQ=255)
                                                                    cgcgGGCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATaa                        <  2:4322229/93‑1 (MQ=255)
                                                                       gggCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACt                     <  1:301162/93‑1 (MQ=255)
                                                                       gggCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACt                     <  1:3050977/93‑1 (MQ=255)
                                                                        ggCAATCGCTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTg                    <  1:1152295/93‑1 (MQ=255)
                                                                        ggCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTg                    >  2:6109320/1‑93 (MQ=255)
                                                                        ggCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTg                    >  2:1251766/1‑93 (MQ=255)
                                                                        ggCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTg                    >  2:5463610/1‑93 (MQ=255)
                                                                         gCAATCGCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGc                   <  2:6670441/93‑1 (MQ=255)
                                                                           aaTCGCTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCcg                 >  2:6852022/1‑93 (MQ=255)
                                                                               gCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGaa             <  2:2061527/93‑1 (MQ=255)
                                                                               gCTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGaa             <  2:3111993/93‑1 (MQ=255)
                                                                                cTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAAt            >  2:3914252/1‑93 (MQ=255)
                                                                                cTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAAt            <  2:3436521/93‑1 (MQ=255)
                                                                                cTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAAt            <  2:7458724/93‑1 (MQ=255)
                                                                                cTTCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAAt            >  2:6502600/1‑93 (MQ=255)
                                                                                 ttCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATc           <  1:6848877/93‑1 (MQ=255)
                                                                                 ttCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATc           <  2:7159894/93‑1 (MQ=255)
                                                                                  tCCAGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCg          <  1:1779701/93‑1 (MQ=255)
                                                                                     aGCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTaa       <  2:4658599/93‑1 (MQ=255)
                                                                                      gCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAAc      >  2:6396060/1‑93 (MQ=255)
                                                                                      gCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAAc      >  1:7051239/1‑93 (MQ=255)
                                                                                      gCCGCGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAAc      >  1:1047735/1‑93 (MQ=255)
                                                                                          tGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGTAg  <  2:4277495/93‑1 (MQ=255)
                                                                                          |                                                                                            
CCCAGGAATCAAACCGTCATAGGGATCGGGCAATTCGCTGTCTGCGGGAAAGCGCACCACATCCCCGGCGCGGGCAATCGCTTCCAGCCGTGGATGCCCTTCCAGCGCAAAGCGTCTACCGAGTACATCCTTTGCCAGACCGTCGATGGCAAGCGGAATAAACTGCCGCGAATCGTAACGTAG  >  NC_000913/2830001‑2830183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: