BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,841,271	T→C	S67G (AGT→GGT)	hycH ←	HycH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,841,271	0	T	C	85.5%	582.8 / 79.5	249	S67G (AGT→GGT)	hycH	HycH
Reads supporting (aligned to +/- strand): ref base T (16/20); new base C (108/104); total (124/125)
Fisher's exact test for biased strand distribution p-value = 5.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01

Only 100 of 267 total aligned reads displayed.

ATCGAATGCGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAGGTGGTGAC  >  NC_000913/2841179‑2841363

  cGAATGCGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCAccgc                                                                                            <  2:4810195/93‑1 (MQ=255)

   gAATGCGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGGTTCActgcc                                                                                           >  1:2664698/1‑93 (MQ=255)

   gAATGCGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCAccgcc                                                                                           >  2:929023/1‑93 (MQ=255)

   gAATGCGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCAccgcc                                                                                           <  1:483180/93‑1 (MQ=255)

    aaTGCGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCAccgcct                                                                                          >  1:969059/1‑93 (MQ=255)

      tGCGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCAccgcctgc                                                                                        >  2:6352072/1‑93 (MQ=255)

      tGCGTAGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCActgcctgc                                                                                        <  2:3014552/93‑1 (MQ=255)

        cGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCgcctgcct                                                                                      <  1:7265494/93‑1 (MQ=255)

          ttGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTcc                                                                                    >  2:395287/1‑93 (MQ=255)

           tGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCa                                                                                   <  1:6741272/93‑1 (MQ=255)

                aGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTg                                                                              >  2:6031405/1‑93 (MQ=255)

                 gCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTgg                                                                             >  2:2127479/1‑93 (MQ=255)

                    tCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCaa                                                                          <  2:889681/93‑1 (MQ=255)

                    tCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCaa                                                                          <  2:3449691/93‑1 (MQ=255)

                    tCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCaa                                                                          <  2:2559277/93‑1 (MQ=255)

                     cGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAAt                                                                         <  1:6533163/93‑1 (MQ=255)

                       gCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATcc                                                                       >  2:2429308/1‑93 (MQ=255)

                        cataTGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGTTTCACCGCCTGCCTCCAGAGTGGCAATCCa                                                                      <  1:1804749/90‑1 (MQ=255)

                            tGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGcc                                                                  <  2:5222068/93‑1 (MQ=255)

                             ggTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCa                                                                 >  2:6681890/1‑93 (MQ=255)

                               ttAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGa                                                               >  2:4904410/1‑93 (MQ=255)

                               ttAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGa                                                               <  1:363932/93‑1 (MQ=255)

                                 aaTGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGata                                                             <  2:5401464/93‑1 (MQ=255)

                                 aaTGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGata                                                             <  2:6990165/93‑1 (MQ=255)

                                 aaTGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGata                                                             >  1:2454577/1‑93 (MQ=255)

                                  aTGTCGATGCCGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCCCCGCCTGCCTCCAGAGTGGCAATCCATGCCAGatat                                                            <  1:1695516/93‑1 (MQ=255)

                                  aTGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGatat                                                            <  1:5601463/93‑1 (MQ=255)

                                   tGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATAtt                                                           <  2:7518391/93‑1 (MQ=255)

                                    gTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTc                                                          <  1:4458923/93‑1 (MQ=255)

                                    gTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTc                                                          <  1:705663/93‑1 (MQ=255)

                                    gTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTc                                                          >  1:6802172/1‑93 (MQ=255)

                                      cGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCAt                                                        >  1:1168848/1‑93 (MQ=255)

                                        aTGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATcc                                                      >  2:7046960/1‑93 (MQ=255)

                                         tGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATccc                                                     >  2:2407740/1‑93 (MQ=255)

                                         tGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATccc                                                     >  1:6295207/1‑93 (MQ=255)

                                         tGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATccc                                                     <  1:6633639/93‑1 (MQ=255)

                                          gACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCa                                                    <  2:4356716/93‑1 (MQ=255)

                                           aCGATCTCACCATATTGCGGCACGCCTTCCATTTTGCCGCGGGCTTCCCCGCCTTCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCAc                                                   <  1:6347381/93‑1 (MQ=255)

                                            cGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACg                                                  <  1:4331835/93‑1 (MQ=255)

                                            cGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACg                                                  >  2:3711564/1‑93 (MQ=255)

                                             gATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACgg                                                 >  1:4073433/1‑93 (MQ=255)

                                             gATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACgg                                                 <  1:3408546/93‑1 (MQ=255)

                                             gATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACgg                                                 >  2:168095/1‑93 (MQ=255)

                                             gATCTCACCATATTTCGGCACGCCTCCCTTTTTGCGGCGGGCTTCCCCCCCTGCCTCCAAAGTGGCAATCCATGCCAGATATTCATCCCACgg                                                 >  2:2577207/1‑93 (MQ=255)

                                              aTCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACggg                                                <  1:2704915/93‑1 (MQ=255)

                                              aTCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACggg                                                <  1:2079977/93‑1 (MQ=255)

                                              aTCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACggg                                                >  1:2175138/1‑93 (MQ=255)

                                              aTCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACggg                                                >  2:740629/1‑93 (MQ=255)

                                               tctcACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGc                                               >  2:5741986/1‑93 (MQ=255)

                                                 tcACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTAGCAATCCATGCCAGATATTCATCCCACGGGCAg                                             >  2:5083472/1‑93 (MQ=255)

                                                   aCCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGt                                           <  1:4975677/93‑1 (MQ=255)

                                                   aCCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGGGGCAATCCATGCCAGATATTTATCCCACGGGGAggg                                           >  1:4178490/1‑92 (MQ=255)

                                                     cATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGa                                         >  1:2023240/1‑93 (MQ=255)

                                                     cATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGa                                         <  1:5089774/93‑1 (MQ=255)

                                                     cATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGa                                         <  2:1215898/93‑1 (MQ=255)

                                                      atatTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAg                                        <  2:6292686/93‑1 (MQ=255)

                                                       tatTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAgc                                       >  1:1269729/1‑93 (MQ=255)

                                                       tatTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAgc                                       >  2:5917499/1‑93 (MQ=255)

                                                        atTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAgcg                                      >  2:3185979/1‑93 (MQ=255)

                                                         tttCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGGGAgcgc                                     >  1:3187779/1‑93 (MQ=255)

                                                         tttCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAgcgc                                     <  2:2924210/93‑1 (MQ=255)

                                                          ttCGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGcgcc                                    <  2:4251880/93‑1 (MQ=255)

                                                           tCGGCACGCCTTCCATTTCGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGcgccg                                   >  1:6397696/1‑93 (MQ=255)

                                                            cGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGcgccgc                                  <  2:1993601/93‑1 (MQ=255)

                                                            cGGCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGcgccgc                                  >  2:5287418/1‑93 (MQ=255)

                                                              gCACGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCtt                                >  2:1474815/1‑93 (MQ=255)

                                                                aCGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCACCCCACGGGCAGGTGAGCGCCGCTTcc                              <  2:2670372/93‑1 (MQ=255)

                                                                aCGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTcc                              >  2:1418062/1‑93 (MQ=255)

                                                                aCGCCTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTcc                              >  1:376428/1‑93 (MQ=255)

                                                                   ccTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGGGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAgg                           >  1:492443/1‑93 (MQ=255)

                                                                   ccTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAgg                           >  1:2893831/1‑93 (MQ=255)

                                                                    cTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGc                          >  2:7287132/1‑93 (MQ=255)

                                                                    cTTCCATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGGGGCAATCCATGCCAGATATTCATCCCACGGGCAGGGGAGCGCCGCTTCCAGGc                          >  1:4565402/1‑93 (MQ=255)

                                                                       ccATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAAt                       >  2:5592256/1‑93 (MQ=255)

                                                                       ccATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAAt                       >  2:3887618/1‑93 (MQ=255)

                                                                        cATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATc                      <  2:133074/93‑1 (MQ=255)

                                                                        cATTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATc                      <  1:7361504/93‑1 (MQ=255)

                                                                         aTTTTGCGGCGGGCTTCACCGCCTGCCTCCCGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCg                     >  1:3535047/1‑93 (MQ=255)

                                                                         aTTTTGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCg                     <  2:336811/93‑1 (MQ=255)

                                                                           tttGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGAt                   <  1:3911604/93‑1 (MQ=255)

                                                                            ttGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATa                  <  1:5800171/93‑1 (MQ=255)

                                                                            ttGCGGCGGGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATa                  <  2:1970375/93‑1 (MQ=255)

                                                                                ggcggGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAAccc              >  2:4732147/1‑93 (MQ=255)

                                                                                 gcggGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAAcccc             <  1:1062598/93‑1 (MQ=255)

                                                                                 gcggGCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAAcccc             >  2:2327243/1‑93 (MQ=255)

                                                                                   gggCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCaa           >  1:1203042/1‑93 (MQ=255)

                                                                                   gggCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCaa           <  2:5357788/93‑1 (MQ=255)

                                                                                   gggCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCaa           <  1:1463906/93‑1 (MQ=255)

                                                                                   gggCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCaa           <  1:7179664/93‑1 (MQ=255)

                                                                                   gggCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCaa           <  1:2735898/93‑1 (MQ=255)

                                                                                    ggCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAg          >  2:6138611/1‑93 (MQ=255)

                                                                                    ggCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAg          <  1:1342580/93‑1 (MQ=255)

                                                                                     gCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAgg         <  2:4174663/93‑1 (MQ=255)

                                                                                     gCTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAgg         >  1:5327332/1‑93 (MQ=255)

                                                                                      cTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAggt        <  1:2739785/93‑1 (MQ=255)

                                                                                      cTTCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAggt        >  1:5464028/1‑93 (MQ=255)

                                                                                       ttCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAggtg       >  1:768494/1‑93 (MQ=255)

                                                                                        tCACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAggtgg      >  1:519859/1‑93 (MQ=255)

                                                                                         cACCGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAggtggt     <  1:3199463/93‑1 (MQ=255)

                                                                                            tgcctgccTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAGGTGGTGAc  >  1:2487079/1‑93 (MQ=255)

ATCGAATGCGTTGGCCAGCATCGGCACATGGTTAATGTCGATGACGATCTCACCATATTTCGGCACGCCTTCCATTTTGCGGCGGGCTTCACTGCCTGCCTCCAGAGTGGCAATCCATGCCAGATATTCATCCCACGGGCAGGTGAGCGCCGCTTCCAGGCAATCGATAACCCCAAGGTGGTGAC  >  NC_000913/2841179‑2841363

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`