BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,856,284	T→C	V390A (GTA→GCA)	mutS →	MutS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,856,284	0	T	C	83.7%	645.1 / 115.1	288	V390A (GTA→GCA)	mutS	MutS
Reads supporting (aligned to +/- strand): ref base T (22/25); new base C (111/130); total (133/155)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 291 total aligned reads displayed.

GCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCG  >  NC_000913/2856193‑2856376

gCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACGGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTa                                                                                             <  1:3491540/93‑1 (MQ=255)

 cTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCAc                                                                                            >  1:2989396/1‑93 (MQ=255)

   cGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAg                                                                                          >  1:3764515/1‑93 (MQ=255)

    gCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAgg                                                                                         <  2:3647525/93‑1 (MQ=255)

       cACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGgcgc                                                                                      >  2:2834515/1‑93 (MQ=255)

       cACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGgcgc                                                                                      >  2:7440810/1‑93 (MQ=255)

       cACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGgcgc                                                                                      >  1:640699/1‑93 (MQ=255)

       cACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGgcgc                                                                                      <  2:5066747/93‑1 (MQ=255)

         cgcgATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTa                                                                                    >  2:1520487/1‑93 (MQ=255)

            gATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGt                                                                                 >  2:2493392/1‑93 (MQ=255)

             aTCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTg                                                                                >  1:5880600/1‑93 (MQ=255)

             aTCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTg                                                                                <  2:6648417/93‑1 (MQ=255)

                tGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTgaga                                                                             >  1:4692432/1‑93 (MQ=255)

                tGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTgaga                                                                             >  2:531536/1‑93 (MQ=255)

                 ggCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGagaa                                                                            >  2:4119615/1‑93 (MQ=255)

                 ggCCCGTATGCGCCACGCTTTCCAGCAACGGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGagaa                                                                            >  2:1154723/1‑93 (MQ=255)

                  gCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGagaag                                                                           <  1:534266/93‑1 (MQ=255)

                   cccGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGagaaga                                                                          >  2:1875969/1‑93 (MQ=255)

                   cccGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGagaaga                                                                          >  2:6858433/1‑93 (MQ=255)

                   cccGTATGCGCCACGCTTTCCAGCAACGGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGagaaga                                                                          <  2:6146062/93‑1 (MQ=255)

                    ccGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGAt                                                                         <  2:1088762/93‑1 (MQ=255)

                    ccGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGAt                                                                         >  2:5408842/1‑93 (MQ=255)

                     cGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATg                                                                        <  2:6103757/93‑1 (MQ=255)

                     cGTATGCGCCACGCTTTCCAGCAACGGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATg                                                                        <  2:500160/93‑1 (MQ=255)

                          gcgcCCCGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGa                                                                   >  2:4595724/1‑93 (MQ=255)

                           cgcCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAg                                                                  <  2:4520414/93‑1 (MQ=255)

                           cgcCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAg                                                                  <  2:6506398/93‑1 (MQ=255)

                            gcCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGt                                                                 <  1:6162801/93‑1 (MQ=255)

                             ccACGCTTTCCAGCAACTGCTGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGtt                                                                <  1:7467948/93‑1 (MQ=255)

                              cACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGttt                                                               <  2:342175/93‑1 (MQ=255)

                              cACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGttt                                                               >  2:3357532/1‑93 (MQ=255)

                                cGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGc                                                             >  1:4332734/1‑93 (MQ=255)

                                cGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGc                                                             <  1:2846684/93‑1 (MQ=255)

                                 gCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGcc                                                            <  2:7066725/93‑1 (MQ=255)

                                 gCTTTCCAGCAACGGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGcc                                                            <  1:4506390/93‑1 (MQ=255)

                                 gCTTTCCAGCAACGGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGcc                                                            <  1:3315515/93‑1 (MQ=255)

                                   tttCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGa                                                          >  1:3665867/1‑93 (MQ=255)

                                      ccAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCt                                                       <  2:2201988/93‑1 (MQ=255)

                                      ccAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCt                                                       <  1:3830527/93‑1 (MQ=255)

                                      ccAGCAACGGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCt                                                       >  1:6724350/1‑93 (MQ=255)

                                       cAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTg                                                      <  1:6084485/93‑1 (MQ=255)

                                        aGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTgc                                                     <  2:6462441/93‑1 (MQ=255)

                                        aGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTgc                                                     <  2:5216526/93‑1 (MQ=255)

                                           aaCTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGcgcg                                                  >  2:1936692/1‑93 (MQ=255)

                                            aCTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGa                                                 >  1:2665728/1‑93 (MQ=255)

                                             cTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGAt                                                <  1:5448728/93‑1 (MQ=255)

                                              tGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATc                                               <  2:1318813/93‑1 (MQ=255)

                                               gCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATct                                              >  1:772378/1‑93 (MQ=255)

                                               gCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATct                                              <  1:5715096/93‑1 (MQ=255)

                                               gCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATct                                              <  1:1280072/93‑1 (MQ=255)

                                               gCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATct                                              >  2:6721179/1‑93 (MQ=255)

                                                 cGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATctgc                                            <  2:7424185/93‑1 (MQ=255)

                                                 cGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATctgc                                            <  1:1459363/93‑1 (MQ=255)

                                                  ggAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATctgct                                           <  2:1758587/93‑1 (MQ=255)

                                                  ggAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATctgct                                           >  1:1017783/1‑93 (MQ=255)

                                                  ggAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATctgct                                           <  2:4920683/93‑1 (MQ=255)

                                                   gAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATctgctg                                          >  2:6135171/1‑93 (MQ=255)

                                                   gAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATctgctg                                          >  2:3158420/1‑93 (MQ=255)

                                                     gCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGga                                        >  1:2270170/1‑93 (MQ=255)

                                                       tgcgtgcgCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGgagc                                      >  2:3390641/1‑93 (MQ=255)

                                                       tgcgtgcgCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGgagc                                      >  1:2221069/1‑93 (MQ=255)

                                                       tgcgtgcgCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGgagc                                      >  1:1661499/1‑93 (MQ=255)

                                                         cgtgcgCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGgagcga                                    <  2:5121999/93‑1 (MQ=255)

                                                         cgtgcgCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGgagcga                                    <  2:819278/93‑1 (MQ=255)

                                                         cgtgcgCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGgagcga                                    <  2:1020979/93‑1 (MQ=255)

                                                         cgtgcgCAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGgagcga                                    <  1:5519428/93‑1 (MQ=255)

                                                            gcgcAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCa                                 >  2:348886/1‑93 (MQ=255)

                                                              gcAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAat                               <  1:2856495/93‑1 (MQ=255)

                                                               cAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatc                              >  2:3748103/1‑93 (MQ=255)

                                                               cAGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatc                              <  1:1522485/93‑1 (MQ=255)

                                                                aGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatca                             <  1:4848416/93‑1 (MQ=255)

                                                                aGTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatca                             >  1:958829/1‑93 (MQ=255)

                                                                 gTTAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatcat                            <  1:391640/93‑1 (MQ=255)

                                                                  ttAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatcatc                           <  2:6004764/93‑1 (MQ=255)

                                                                  ttAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatcatc                           >  1:6965267/1‑93 (MQ=255)

                                                                  ttAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatcatc                           >  1:6338382/1‑93 (MQ=255)

                                                                  ttAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAatcatc                           <  1:554338/93‑1 (MQ=255)

                                                                   tAGAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCg                          >  1:2001023/1‑93 (MQ=255)

                                                                    aGAAACTGTCGATAGTGCGCCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGa                         <  1:4186864/93‑1 (MQ=255)

                                                                     gAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGac                        <  1:2546614/93‑1 (MQ=255)

                                                                     gAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGac                        <  2:5522412/93‑1 (MQ=255)

                                                                     gAAACTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGac                        <  2:239097/93‑1 (MQ=255)

                                                                      aaaCTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGaca                       <  2:4458713/93‑1 (MQ=255)

                                                                         cTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGacacac                    <  2:2703278/93‑1 (MQ=255)

                                                                         cTGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGacacac                    <  2:226990/93‑1 (MQ=255)

                                                                          tGTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAcc                   >  2:1595803/1‑93 (MQ=255)

                                                                           gTCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccg                  >  1:3599611/1‑93 (MQ=255)

                                                                            tCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgc                 >  2:1672469/1‑93 (MQ=255)

                                                                            tCGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgc                 <  1:1246447/93‑1 (MQ=255)

                                                                             cGATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgcc                <  1:7157445/93‑1 (MQ=255)

                                                                              gATAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgccg               >  1:4904059/1‑93 (MQ=255)

                                                                               aTAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCgg              <  2:4207125/93‑1 (MQ=255)

                                                                               aTAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCgg              >  1:508937/1‑93 (MQ=255)

                                                                               aTAGTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCgg              >  1:137569/1‑93 (MQ=255)

                                                                                tAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGt             <  2:567977/93‑1 (MQ=255)

                                                                                  gTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGc           >  1:5010038/1‑93 (MQ=255)

                                                                                  gTGCACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGc           <  1:3153396/93‑1 (MQ=255)

                                                                                     cACCGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTgg        <  1:5129275/93‑1 (MQ=255)

                                                                                       ccGGCACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTa      <  1:2334122/93‑1 (MQ=255)

                                                                                         ggTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTAcg    >  2:7140887/1‑93 (MQ=255)

GCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCG  >  NC_000913/2856193‑2856376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`