Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,012,261 A→G intergenic (‑1/+47) b2875 ← / ← b2876 putative synthases/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,012,2610AG83.3% 644.8 / 117.9 287intergenic (‑1/+47)b2875/b2876putative synthases/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (20/28);  new base G (123/116);  total (143/144)
Fisher's exact test for biased strand distribution p-value = 2.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01

Only 100 of 287 total aligned reads displayed.

GGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATA  >  NC_000913/3012171‑3012350
                                                                                          |                                                                                         
  gAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCaa                                                                                       <  1:1644781/93‑1 (MQ=255)
    gTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAAcc                                                                                     <  1:2903015/93‑1 (MQ=255)
      cGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTc                                                                                   <  1:1242717/93‑1 (MQ=255)
        aGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCaa                                                                                 <  1:1002745/93‑1 (MQ=255)
        aGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCaa                                                                                 <  2:240627/93‑1 (MQ=255)
        aGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCaa                                                                                 <  1:6644889/93‑1 (MQ=255)
           cTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATgg                                                                              >  1:4281450/1‑93 (MQ=255)
           cTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATgg                                                                              >  2:7294900/1‑93 (MQ=255)
            tCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGa                                                                             <  1:7199583/93‑1 (MQ=255)
            tCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGa                                                                             <  2:1698636/93‑1 (MQ=255)
            tCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGa                                                                             >  2:219149/1‑93 (MQ=255)
             cGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGat                                                                            >  1:235896/1‑93 (MQ=255)
              ggCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGata                                                                           <  1:4774691/93‑1 (MQ=255)
              ggCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGata                                                                           >  1:1698029/1‑93 (MQ=255)
               gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGatat                                                                          >  1:763643/1‑93 (MQ=255)
                cTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATc                                                                         >  2:3507023/1‑93 (MQ=255)
                 tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATcc                                                                        >  1:4467539/1‑93 (MQ=255)
                 tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATcc                                                                        <  2:3334082/93‑1 (MQ=255)
                 tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATcc                                                                        <  1:6877304/93‑1 (MQ=255)
                  aTCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCt                                                                       >  2:6168648/1‑93 (MQ=255)
                  aTCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTAAAAATATTCATGCCAACCTCAATGGATATCCt                                                                       <  1:6174082/93‑1 (MQ=255)
                   tCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCtt                                                                      >  1:5038788/1‑93 (MQ=255)
                   tCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCtt                                                                      <  1:2055383/93‑1 (MQ=255)
                    caacaaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGACATCCttt                                                                     <  1:42565/93‑1 (MQ=255)
                     aacaaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTc                                                                    <  1:1849694/93‑1 (MQ=255)
                      acaaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCa                                                                   <  1:5856650/93‑1 (MQ=255)
                        aaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGt                                                                 <  1:5121032/93‑1 (MQ=255)
                         aTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTa                                                                >  1:1028504/1‑93 (MQ=255)
                           ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAAc                                                              <  2:150137/93‑1 (MQ=255)
                            tGCGCCATAGCAAACGGGCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCACCCTCAATGGATATCCTTTCAGTAAcc                                                             <  1:5407028/93‑1 (MQ=255)
                            tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAAcc                                                             <  2:5056451/93‑1 (MQ=255)
                             gcgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAAccc                                                            >  2:6809163/1‑93 (MQ=255)
                                 cATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGaa                                                        <  1:4423718/93‑1 (MQ=255)
                                  aTAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAAt                                                       <  2:890479/93‑1 (MQ=255)
                                  aTAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAAt                                                       <  2:6145941/93‑1 (MQ=255)
                                   tAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATa                                                      >  2:6066336/1‑93 (MQ=255)
                                   tAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATa                                                      >  2:559169/1‑93 (MQ=255)
                                     gCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATAcc                                                    >  1:3390815/1‑93 (MQ=255)
                                     gCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATAcc                                                    <  1:5563517/93‑1 (MQ=255)
                                      cAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATAccc                                                   <  2:834667/93‑1 (MQ=255)
                                       aaaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCg                                                  <  2:4305883/93‑1 (MQ=255)
                                        aaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCgg                                                 >  2:453933/1‑93 (MQ=255)
                                        aaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCgg                                                 >  1:2687407/1‑93 (MQ=255)
                                        aaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCgg                                                 <  2:3749564/93‑1 (MQ=255)
                                         aCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCggg                                                <  1:94778/93‑1 (MQ=255)
                                            gACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCg                                             >  2:6707324/1‑93 (MQ=255)
                                            gACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCg                                             >  1:2545696/1‑93 (MQ=255)
                                            gACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCg                                             >  2:6406921/1‑93 (MQ=255)
                                             aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGc                                            >  1:5934652/1‑93 (MQ=255)
                                               aaTTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTa                                          >  2:2775571/1‑93 (MQ=255)
                                                 ttttGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAAt                                        <  1:3620757/93‑1 (MQ=255)
                                                 ttttGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAAt                                        <  2:3439213/93‑1 (MQ=255)
                                                  tttGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAAtt                                       <  2:1152234/93‑1 (MQ=255)
                                                     gCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTcac                                    >  2:2753243/1‑93 (MQ=255)
                                                       tctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACaa                                  <  2:4483362/93‑1 (MQ=255)
                                                        ctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACaaa                                 <  1:525127/93‑1 (MQ=255)
                                                        ctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATACACaaa                                 <  2:4776679/93‑1 (MQ=255)
                                                         ttCGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAAt                                >  2:530906/1‑93 (MQ=255)
                                                          tCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATc                               >  1:6010379/1‑93 (MQ=255)
                                                           cGAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCt                              <  1:2990004/93‑1 (MQ=255)
                                                            gAGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTg                             >  2:2954737/1‑93 (MQ=255)
                                                             aGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgc                            >  2:6518467/1‑93 (MQ=255)
                                                             aGTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgc                            <  1:6108215/93‑1 (MQ=255)
                                                              gTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg                           >  2:1327886/1‑93 (MQ=255)
                                                              gTTTTGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg                           >  2:4059851/1‑93 (MQ=255)
                                                               ttttGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgc                          <  2:1833501/93‑1 (MQ=255)
                                                               ttttGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgc                          <  2:3595540/93‑1 (MQ=255)
                                                                tttGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg                         <  1:1453763/93‑1 (MQ=255)
                                                                tttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg                         >  1:680981/1‑93 (MQ=255)
                                                                  tGCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGcgcgcg                       <  1:6276447/93‑1 (MQ=255)
                                                                   gCAGCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGa                      <  2:2676844/93‑1 (MQ=255)
                                                                     aGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGAtt                    <  1:3896917/93‑1 (MQ=255)
                                                                      gCCTCTGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTg                   >  2:3143492/1‑93 (MQ=255)
                                                                      gCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTg                   <  1:3534890/93‑1 (MQ=255)
                                                                        ctctGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa                 >  2:1597768/1‑93 (MQ=255)
                                                                        ctctGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa                 >  1:2813668/1‑93 (MQ=255)
                                                                        ctctGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa                 >  2:4182818/1‑93 (MQ=255)
                                                                         tctGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAg                >  1:2935928/1‑93 (MQ=255)
                                                                         tctGTGAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAg                >  2:5850952/1‑93 (MQ=255)
                                                                         tctGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAg                >  2:4438573/1‑93 (MQ=255)
                                                                           tgtgAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa              <  1:531075/93‑1 (MQ=255)
                                                                           tgtgAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa              <  2:6102522/93‑1 (MQ=255)
                                                                           tgtgAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa              >  2:3900439/1‑93 (MQ=255)
                                                                           tgtgAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa              >  2:5925041/1‑93 (MQ=255)
                                                                            gtgAAAATATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAt             >  1:4943615/1‑93 (MQ=255)
                                                                             tgAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg            <  2:2511194/93‑1 (MQ=255)
                                                                               aaaaTATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGtt          <  1:562234/93‑1 (MQ=255)
                                                                               aaaaTATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGtt          >  1:3771101/1‑93 (MQ=255)
                                                                                aaaTATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTc         >  2:2084674/1‑93 (MQ=255)
                                                                                aaaTATTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTc         <  1:5717221/93‑1 (MQ=255)
                                                                                  atatTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCtt       <  2:5161304/93‑1 (MQ=255)
                                                                                   tatTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTg      <  2:1057494/93‑1 (MQ=255)
                                                                                   tatTCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTg      >  2:1540233/1‑93 (MQ=255)
                                                                                     ttCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGta    <  2:5775792/93‑1 (MQ=255)
                                                                                     ttCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGta    >  1:4679938/1‑93 (MQ=255)
                                                                                     ttCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGta    >  2:7468370/1‑93 (MQ=255)
                                                                                     ttCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGta    <  1:3257901/93‑1 (MQ=255)
                                                                                      tCATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGtat   >  1:7447641/1‑93 (MQ=255)
                                                                                       cATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGtata  <  2:6238521/93‑1 (MQ=255)
                                                                                       cATGCCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGtata  <  2:4651994/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATATCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATA  >  NC_000913/3012171‑3012350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: