BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,030,024	T→C	L236P (CTG→CCG)	ygfU →	putative permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,030,024	0	T	C	83.1%	716.2 / 145.9	325	L236P (CTG→CCG)	ygfU	putative permease
Reads supporting (aligned to +/- strand): ref base T (28/27); new base C (129/141); total (157/168)
Fisher's exact test for biased strand distribution p-value = 7.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 327 total aligned reads displayed.

CGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGC  >  NC_000913/3029932‑3030116

cGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACt                                                                                              >  1:6428401/1‑93 (MQ=255)

 gTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTg                                                                                             >  2:5426292/1‑93 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTgg                                                                                            >  2:4709681/1‑93 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTgg                                                                                            >  2:837057/1‑93 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCgg                                                                                            <  2:5310120/93‑1 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCgg                                                                                            >  1:5439697/1‑93 (MQ=255)

  tttatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCgg                                                                                            <  1:4003208/93‑1 (MQ=255)

  gttatttaGGTATTTCCTTTACCGTCTTAATTTTTATCTTGCTCATTACTCGCTAGGCGAAAGGAGTTATGTCCAACGGCGCCGTATTACCgg                                                                                            <  1:5616553/92‑1 (MQ=255)

    tatttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCgggg                                                                                          <  1:6007083/93‑1 (MQ=255)

     atttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGa                                                                                         <  2:293340/93‑1 (MQ=255)

     atttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGa                                                                                         >  2:25684/1‑93 (MQ=255)

       ttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAtt                                                                                       <  1:98037/93‑1 (MQ=255)

       ttaGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAtt                                                                                       <  1:700267/93‑1 (MQ=255)

         aGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGt                                                                                     >  1:5885680/1‑93 (MQ=255)

            tATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTAtt                                                                                  <  2:6391819/93‑1 (MQ=255)

             aTCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTTGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTAttt                                                                                 >  1:6221900/1‑93 (MQ=255)

                  cTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGAGTGTATTTGGCtt                                                                            <  1:2627505/93‑1 (MQ=255)

                   tttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCttt                                                                           >  2:725424/1‑93 (MQ=255)

                   tttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCttt                                                                           >  1:7294811/1‑93 (MQ=255)

                   tttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCttt                                                                           <  2:6717935/93‑1 (MQ=255)

                   tttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCttt                                                                           >  2:53690/1‑93 (MQ=255)

                    ttGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCtttt                                                                          <  2:4366007/93‑1 (MQ=255)

                     tGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCttttt                                                                         <  2:2841887/93‑1 (MQ=255)

                      gCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTa                                                                        <  2:6482759/93‑1 (MQ=255)

                      gCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTa                                                                        <  2:3400644/93‑1 (MQ=255)

                       ccGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTAc                                                                       >  1:5167046/1‑93 (MQ=255)

                       ccGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTAc                                                                       <  2:2058343/93‑1 (MQ=255)

                        cGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACt                                                                      >  2:219470/1‑93 (MQ=255)

                         gTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACtt                                                                     <  2:6083032/93‑1 (MQ=255)

                         gTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACtt                                                                     >  2:1394965/1‑93 (MQ=255)

                         gTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACtt                                                                     >  1:3761639/1‑93 (MQ=255)

                          tCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACttt                                                                    >  1:1474825/1‑93 (MQ=255)

                          tCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACttt                                                                    <  2:5587316/93‑1 (MQ=255)

                          tCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACttt                                                                    >  2:7111068/1‑93 (MQ=255)

                          tCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACttt                                                                    <  1:4967722/93‑1 (MQ=255)

                           cTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTc                                                                   >  2:3880944/1‑93 (MQ=255)

                             tAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGt                                                                 <  2:3514642/93‑1 (MQ=255)

                             tAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGt                                                                 <  1:3330528/93‑1 (MQ=255)

                              aaTTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTg                                                                <  1:4387919/93‑1 (MQ=255)

                              aaTTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTg                                                                >  1:5405281/1‑93 (MQ=255)

                                tttttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGga                                                              >  1:2905306/1‑93 (MQ=255)

                                 ttttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGgat                                                             <  2:4264654/93‑1 (MQ=255)

                                 ttttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGgat                                                             >  2:5793420/1‑93 (MQ=255)

                                  tttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGgatg                                                            <  2:6944047/93‑1 (MQ=255)

                                   ttATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGgatga                                                           <  2:5293996/93‑1 (MQ=255)

                                      tCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGAtgatga                                                        >  2:5501340/1‑93 (MQ=255)

                                      tCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGAtgatga                                                        >  2:3092837/1‑93 (MQ=255)

                                      tCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGAtgatga                                                        >  2:3838751/1‑93 (MQ=255)

                                       cTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGatgaa                                                       <  1:5553191/93‑1 (MQ=255)

                                       cTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGatgaa                                                       >  1:4135814/1‑93 (MQ=255)

                                        ttGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGatgaat                                                      <  1:2773539/93‑1 (MQ=255)

                                        ttGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGatgaat                                                      >  1:2506514/1‑93 (MQ=255)

                                           cTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGAtgaatgaa                                                   >  1:3607981/1‑93 (MQ=255)

                                              aTTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTc                                                >  1:3885076/1‑93 (MQ=255)

                                                tACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCaa                                              <  2:6314502/93‑1 (MQ=255)

                                                tACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCaa                                              >  2:5969516/1‑93 (MQ=255)

                                                 aCTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAt                                             >  1:7337302/1‑93 (MQ=255)

                                                 aCTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAt                                             <  1:2174259/93‑1 (MQ=255)

                                                 aCTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAt                                             <  1:838229/93‑1 (MQ=255)

                                                  cTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAtt                                            <  2:3599793/93‑1 (MQ=255)

                                                   tCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAttt                                           >  2:3696046/1‑93 (MQ=255)

                                                   tCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAAttt                                           >  1:6738144/1‑93 (MQ=255)

                                                    cGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTa                                          <  1:130412/93‑1 (MQ=255)

                                                     gCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTAt                                         >  2:3021011/1‑93 (MQ=255)

                                                      cTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATc                                        <  2:4862981/93‑1 (MQ=255)

                                                      cTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATc                                        >  1:784660/1‑93 (MQ=255)

                                                       tATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATcc                                       >  1:5753871/1‑93 (MQ=255)

                                                        aTGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCg                                      >  2:2730664/1‑93 (MQ=255)

                                                        aTGCGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCg                                      <  1:4499824/93‑1 (MQ=255)

                                                          gCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCggg                                    >  1:440561/1‑93 (MQ=255)

                                                           cGAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGc                                   <  2:1736608/93‑1 (MQ=255)

                                                            gAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCt                                  >  2:3981414/1‑93 (MQ=255)

                                                            gAAAGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCt                                  <  1:2973315/93‑1 (MQ=255)

                                                             aaaGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTa                                 >  1:3121573/1‑93 (MQ=255)

                                                              aaGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAc                                >  1:4693094/1‑93 (MQ=255)

                                                              aaGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTAc                                >  1:1003205/1‑93 (MQ=255)

                                                               aGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACa                               <  2:1247353/93‑1 (MQ=255)

                                                               aGGATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACa                               <  1:1607619/93‑1 (MQ=255)

                                                                ggATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACat                              <  1:1081828/93‑1 (MQ=255)

                                                                 gATTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACatg                             >  2:5180935/1‑93 (MQ=255)

                                                                  aTTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACatga                            <  1:1997029/93‑1 (MQ=255)

                                                                  aTTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACatga                            <  2:5875318/93‑1 (MQ=255)

                                                                  aTTTATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACatga                            <  2:1104928/93‑1 (MQ=255)

                                                                     tATGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGc                         <  1:3961323/93‑1 (MQ=255)

                                                                       tGTCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCtt                       <  2:2342133/93‑1 (MQ=255)

                                                                         tCCAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCa                     <  1:4647658/93‑1 (MQ=255)

                                                                          ccAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCAt                    >  2:5015350/1‑93 (MQ=255)

                                                                          ccAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCAt                    <  1:6817498/93‑1 (MQ=255)

                                                                           cAACGTCGCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATg                   >  1:346194/1‑93 (MQ=255)

                                                                                  gCCGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCg            >  2:740049/1‑93 (MQ=255)

                                                                                   ccGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGa           >  1:1819633/1‑93 (MQ=255)

                                                                                    cGTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGAt          <  1:1726383/93‑1 (MQ=255)

                                                                                    cGTATTACCGGGGATTGTATTTGGCTTTTTACTCTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGAt          <  1:7429070/93‑1 (MQ=255)

                                                                                     gTATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGAtt         <  1:7133446/93‑1 (MQ=255)

                                                                                      tATTACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTg        >  2:1586323/1‑93 (MQ=255)

                                                                                        ttACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGtt      <  2:1170159/93‑1 (MQ=255)

                                                                                         tACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTa     <  2:6842931/93‑1 (MQ=255)

                                                                                         tACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTa     <  2:1479361/93‑1 (MQ=255)

                                                                                         tACCGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTa     <  2:2890970/93‑1 (MQ=255)

                                                                                          aCTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTAc    <  2:3222210/93‑1 (MQ=255)

CGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGC  >  NC_000913/3029932‑3030116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`