BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,130,334	A→G	V30V (GTT→GTC)	b2983 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,130,334	0	A	G	100.0%	944.9 / NA	280	V30V (GTT→GTC)	b2983	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (118/162); total (118/162)

Only 100 of 289 total aligned reads displayed.

GATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAA  >  NC_000913/3130245‑3130423

gATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCacgaca                                                                                        >  2:1150272/1‑93 (MQ=255)

 aTTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACAt                                                                                       <  1:2088784/93‑1 (MQ=255)

 aTTGCACAACCACCAGTACGCCAAACAGGGCGGGCGTCATCCCTTTCCCGG‑CACACGAGAGCGCC‑AACAGCCCCAGCAG‑GGCGCTCGCGACAt                                                                                       <  1:187602/93‑1 (MQ=255)

  ttGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACAtt                                                                                      >  2:3253013/1‑93 (MQ=255)

   tGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTa                                                                                     <  1:3721329/93‑1 (MQ=255)

    gCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTAc                                                                                    <  2:7263608/93‑1 (MQ=255)

    gCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTAc                                                                                    <  1:3659389/93‑1 (MQ=255)

    gCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCCG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTAc                                                                                    >  1:6980687/1‑93 (MQ=255)

      acaATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTg                                                                                  <  1:6394100/93‑1 (MQ=255)

      acaATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTg                                                                                  >  2:4271367/1‑93 (MQ=255)

        aaTCACAAGTACGCAAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGCCCCAGCAA‑GGCGCTCACGACATTACTGGa                                                                                <  1:3039222/93‑1 (MQ=255)

            cccAGTCCGCAAAACAGGGCGGGCGTCATCCCTTTCCCGG‑CACACGAGAGCCCC‑AACAGCCCCAGCAG‑GGCGCTCACGACATTACTGGAGCCt                                                                            <  1:6622501/92‑1 (MQ=255)

            aCCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑AGCGCTCACGACATTACTGGAGCCt                                                                            >  1:7253119/1‑93 (MQ=255)

             ccAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTa                                                                           >  1:2271853/1‑93 (MQ=255)

              cAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTaa                                                                          <  2:4614540/93‑1 (MQ=255)

               aGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAAc                                                                         >  2:2095567/1‑93 (MQ=255)

                    gCCAAACATGGCGGGCGTCATCCCTTTACCCG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGgc                                                                    >  1:845652/1‑93 (MQ=255)

                      cAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGgcgc                                                                  <  2:1829469/93‑1 (MQ=255)

                       aaaCATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCt                                                                 >  2:2721823/1‑93 (MQ=255)

                         aCATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTAt                                                               >  2:3849563/1‑93 (MQ=255)

                           aTGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTg                                                             <  2:5344832/93‑1 (MQ=255)

                           aTGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTg                                                             >  1:6669156/1‑93 (MQ=255)

                             ggggggcgTCCCCCCTTTACCGG‑CAACGGGGGGCCCCAAACAGCCCCAGCAG‑GGCCCCCACGACATTACTGGAGCCTAACCAGGCGCTATTGc                                                            <  1:6431239/90‑1 (MQ=255)

                             ggcgggcgTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCg                                                           >  2:5816880/1‑93 (MQ=255)

                             ggcgggcgTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCg                                                           >  1:6240890/1‑93 (MQ=255)

                               cgggcgTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGCCCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaa                                                         <  2:5615763/93‑1 (MQ=255)

                               cgggcgTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaa                                                         <  2:7365232/93‑1 (MQ=255)

                                 ggcgTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaata                                                       <  2:3106971/93‑1 (MQ=255)

                                  gcgTCATCCCTTTCCCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaataa                                                      <  1:6487540/93‑1 (MQ=255)

                                    ttcctCCCTTTCCCGG‑CACAGGAGAGCCCC‑AACAGCCCCAGCAG‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATg                                                    <  1:3878852/89‑1 (MQ=255)

                                     tCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   >  1:2243148/1‑93 (MQ=255)

                                     tCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   >  2:4462480/1‑93 (MQ=255)

                                     tCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                   <  1:4790199/93‑1 (MQ=255)

                                      cATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                  <  1:2024755/93‑1 (MQ=255)

                                      cATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                  <  2:7090103/93‑1 (MQ=255)

                                       aTCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAAGCAGGCGCTATTGCGAATAATGGTg                                                 >  2:4786636/1‑93 (MQ=255)

                                        tCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGc                                                >  1:2473532/1‑93 (MQ=255)

                                        tCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGc                                                <  2:6037932/93‑1 (MQ=255)

                                         cccTTTACCGGCCACCGGAGGCCCCA‑AACAG‑CCCAACAAGGGCCCCCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGc                                                <  1:5210205/93‑1 (MQ=255)

                                         cccTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCg                                               >  2:4111450/1‑93 (MQ=255)

                                         cccTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCg                                               >  1:1480064/1‑93 (MQ=255)

                                          ccTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGa                                              <  2:1405533/93‑1 (MQ=255)

                                          ccTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGa                                              >  2:4665121/1‑93 (MQ=255)

                                           cTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaa                                             >  2:292163/1‑93 (MQ=255)

                                           cTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaa                                             >  2:6612843/1‑93 (MQ=255)

                                            tttACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaaa                                            <  1:6153151/93‑1 (MQ=255)

                                            tttACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaaa                                            >  2:3292132/1‑93 (MQ=255)

                                            tttACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaaa                                            <  2:5432508/93‑1 (MQ=255)

                                             ttACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                           <  2:5736877/93‑1 (MQ=255)

                                             ttACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                           >  2:8071/1‑93 (MQ=255)

                                               aCCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAcgc                                         <  1:3234161/93‑1 (MQ=255)

                                               aCCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAcgc                                         >  1:2692471/1‑93 (MQ=255)

                                                  gg‑CACAGGAGAGCCCA‑AACAGCCCCAGAAG‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGcc                                      <  1:1697042/93‑1 (MQ=255)

                                                   g‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCa                                     <  2:4488398/93‑1 (MQ=255)

                                                   g‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCa                                     <  2:5894785/93‑1 (MQ=255)

                                                     cacaCGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCAt                                    >  2:911850/1‑93 (MQ=255)

                                                     cacaCGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCAt                                    <  1:4478227/93‑1 (MQ=255)

                                                      acacGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATc                                   <  1:1068359/93‑1 (MQ=255)

                                                      acacGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATc                                   <  1:2978337/93‑1 (MQ=255)

                                                      acacGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATc                                   >  1:674146/1‑93 (MQ=255)

                                                        acGAGAGCGCC‑AACAGCCCCACCAA‑GGCCCCCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTg                                 <  1:2744538/93‑1 (MQ=255)

                                                          gagaGCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCCCCATCTGCa                               >  2:6288062/1‑93 (MQ=255)

                                                           agagCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaa                              >  2:2678320/1‑93 (MQ=255)

                                                           agagCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaa                              >  1:5575370/1‑93 (MQ=255)

                                                           agagCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaa                              <  2:1197706/93‑1 (MQ=255)

                                                           agagCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaa                              >  1:4744714/1‑93 (MQ=255)

                                                            gagCGCC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaaa                             >  1:1305894/1‑93 (MQ=255)

                                                              gcgcC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAAcc                           <  2:1043391/93‑1 (MQ=255)

                                                              gcgcC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAAcc                           >  1:4628511/1‑93 (MQ=255)

                                                                gcC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCaa                         <  1:683860/93‑1 (MQ=255)

                                                                gcC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCaa                         <  1:7347567/93‑1 (MQ=255)

                                                                gcC‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCaa                         <  1:4885449/93‑1 (MQ=255)

                                                                ccc‑AACAGCCCCAGCAA‑GGCCCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCaa                         <  1:3980566/92‑1 (MQ=255)

                                                                 cc‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        <  2:742439/93‑1 (MQ=255)

                                                                 cc‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        >  1:4330405/1‑93 (MQ=255)

                                                                 cc‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                        <  2:3600336/93‑1 (MQ=255)

                                                                  c‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATg                       >  1:3175098/1‑93 (MQ=255)

                                                                  c‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATg                       <  2:1542164/93‑1 (MQ=255)

                                                                  c‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATg                       <  2:2987464/93‑1 (MQ=255)

                                                                  c‑AACAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATg                       >  1:4427173/1‑93 (MQ=255)

                                                                    aaCAGCCCCAGCAG‑GGCCCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGt                      <  1:5027336/93‑1 (MQ=255)

                                                                    aaCAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGt                      >  1:540359/1‑93 (MQ=255)

                                                                    aaCAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGt                      <  1:3480159/93‑1 (MQ=255)

                                                                      cAGACCCAGCAG‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGttt                    <  2:2472302/93‑1 (MQ=255)

                                                                      cAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGttt                    >  1:4168020/1‑93 (MQ=255)

                                                                      cAGACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGttt                    >  1:2773147/1‑93 (MQ=255)

                                                                        gACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  <  1:1738521/93‑1 (MQ=255)

                                                                        gACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  >  1:5552629/1‑93 (MQ=255)

                                                                        gACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  <  1:3315985/93‑1 (MQ=255)

                                                                        gACCCAGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                  <  2:3129453/93‑1 (MQ=255)

                                                                             aGCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTa             <  2:6162884/93‑1 (MQ=255)

                                                                              gCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaa            >  2:6578368/1‑93 (MQ=255)

                                                                              gCAA‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaa            >  1:1125484/1‑93 (MQ=255)

                                                                                aa‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaaaa          <  1:601049/93‑1 (MQ=255)

                                                                                aa‑GGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaaaa          >  2:5040675/1‑93 (MQ=255)

                                                                                   ggCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAcc        >  2:6356967/1‑93 (MQ=255)

                                                                                   ggCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAcc        <  2:2860947/93‑1 (MQ=255)

                                                                                    gcgcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAccc       >  2:4906857/1‑93 (MQ=255)

                                                                                      ccccacgACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGc     <  1:4022991/90‑1 (MQ=255)

                                                                                         cacgACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCaa  <  2:5516800/93‑1 (MQ=255)

GATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTACCGG‑CACACGAGAGCGCC‑AACAGACCCAGCAA‑GGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCAA  >  NC_000913/3130245‑3130423

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`