Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,151,557 C→T intergenic (+119/‑21) metC → / → yghB cystathionine beta‑lyase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,151,5570CT87.6% 783.0 / 61.8 267intergenic (+119/‑21)metC/yghBcystathionine beta‑lyase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (18/15);  new base T (112/122);  total (130/137)
Fisher's exact test for biased strand distribution p-value = 5.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01

Only 100 of 271 total aligned reads displayed.

GACATTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTCATATT  >  NC_000913/3151465‑3151649
                                                                                            |                                                                                            
gACATTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAAc                                                                                              <  1:1015736/93‑1 (MQ=255)
gACATTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAAc                                                                                              >  1:6725028/1‑93 (MQ=255)
gACATTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAAc                                                                                              <  2:6081293/93‑1 (MQ=255)
  cATTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGc                                                                                            >  2:5005668/1‑93 (MQ=255)
  cATTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGc                                                                                            <  2:3974065/93‑1 (MQ=255)
   aTTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCt                                                                                           >  1:2274033/1‑93 (MQ=255)
   aTTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCt                                                                                           <  2:3939431/93‑1 (MQ=255)
    ttttATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTg                                                                                          >  1:462078/1‑93 (MQ=255)
    ttttATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTg                                                                                          <  1:3925803/93‑1 (MQ=255)
     tttATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCTGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGt                                                                                         <  1:1456289/93‑1 (MQ=255)
     tttATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGt                                                                                         <  2:6581782/93‑1 (MQ=255)
      ttATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTGAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGtt                                                                                        >  2:1839110/1‑93 (MQ=255)
      ttATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGtt                                                                                        >  1:6636907/1‑93 (MQ=255)
        aTTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTcc                                                                                      >  2:7018299/1‑93 (MQ=255)
         ttGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCca                                                                                     >  2:3284435/1‑93 (MQ=255)
         ttGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCca                                                                                     <  1:4341909/93‑1 (MQ=255)
           gtgAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCcaca                                                                                   <  2:4711357/93‑1 (MQ=255)
           gtgAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCcaca                                                                                   >  2:6485911/1‑93 (MQ=255)
            tgAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAg                                                                                  <  1:2196454/93‑1 (MQ=255)
            tgAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCCACAg                                                                                  >  2:6201876/1‑93 (MQ=255)
             gAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAgg                                                                                 >  2:4169827/1‑93 (MQ=255)
             gAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAgg                                                                                 >  2:1409992/1‑93 (MQ=255)
              aaaaGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGa                                                                                <  2:2248699/93‑1 (MQ=255)
                aaGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGaaa                                                                              <  1:6317390/93‑1 (MQ=255)
                aaGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGaaa                                                                              <  2:1131581/93‑1 (MQ=255)
                aaGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGaaa                                                                              <  2:267054/93‑1 (MQ=255)
                 aGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAg                                                                             >  2:709929/1‑93 (MQ=255)
                  gTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGGGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGt                                                                            >  2:1567930/1‑93 (MQ=255)
                  gTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGt                                                                            <  1:561709/93‑1 (MQ=255)
                   tCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTc                                                                           >  2:356390/1‑93 (MQ=255)
                    cTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTcc                                                                          >  1:4405393/1‑93 (MQ=255)
                    cTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTcc                                                                          >  2:7170512/1‑93 (MQ=255)
                     ttAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCa                                                                         >  1:4575043/1‑93 (MQ=255)
                     ttAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCa                                                                         <  2:3005658/93‑1 (MQ=255)
                     ttAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCa                                                                         <  2:7080701/93‑1 (MQ=255)
                     ttAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCa                                                                         >  1:7184458/1‑93 (MQ=255)
                     ttAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCa                                                                         <  1:3105505/93‑1 (MQ=255)
                     ttAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGTCCa                                                                         >  1:5389463/1‑93 (MQ=255)
                      tAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCAt                                                                        <  1:1050611/93‑1 (MQ=255)
                      tAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCAt                                                                        <  1:708829/93‑1 (MQ=255)
                       aaaTTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATg                                                                       >  2:3169855/1‑93 (MQ=255)
                       aaaTTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATg                                                                       <  2:1006352/93‑1 (MQ=255)
                        aaTTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATgg                                                                      >  1:5753772/1‑93 (MQ=255)
                         aTTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGc                                                                     <  2:2039667/93‑1 (MQ=255)
                         aTTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGc                                                                     >  1:3703453/1‑93 (MQ=255)
                          ttgttgCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCt                                                                    >  2:2606893/1‑93 (MQ=255)
                          ttgttgCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGGACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCt                                                                    >  1:6863590/1‑93 (MQ=255)
                                cGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTAtt                                                              <  2:2988138/93‑1 (MQ=255)
                                   ccGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATCCaa                                                           <  1:7502638/93‑1 (MQ=255)
                                     gggATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGa                                                         >  1:2754889/1‑93 (MQ=255)
                                      ggATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGat                                                        <  2:1194147/93‑1 (MQ=255)
                                      ggATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGat                                                        >  2:7528701/1‑93 (MQ=255)
                                      ggACCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGat                                                        >  2:3343527/1‑93 (MQ=255)
                                       gATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGata                                                       <  1:4779203/93‑1 (MQ=255)
                                       gATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGata                                                       >  1:5839713/1‑93 (MQ=255)
                                         tCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATatc                                                     >  1:5201150/1‑93 (MQ=255)
                                         tCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATatc                                                     <  1:4161824/93‑1 (MQ=255)
                                          cAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATatca                                                    <  1:3741149/93‑1 (MQ=255)
                                           aaGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATatcat                                                   >  2:6767062/1‑93 (MQ=255)
                                             ggCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCg                                                 <  2:820378/93‑1 (MQ=255)
                                              gCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGc                                                <  1:5782269/93‑1 (MQ=255)
                                                  cccGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTgcg                                            >  1:25141/1‑93 (MQ=255)
                                                     ggACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGctc                                         >  1:6017091/1‑93 (MQ=255)
                                                     ggACGATTCAGGAGTACAATAGGCAGAGAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGctc                                         >  2:6416314/1‑93 (MQ=255)
                                                        cGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTgg                                      >  2:6135423/1‑93 (MQ=255)
                                                           ttCAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCaa                                   >  1:7318312/1‑93 (MQ=255)
                                                            tCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAac                                  >  2:2782468/1‑93 (MQ=255)
                                                             cAGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAaca                                 <  2:5756021/93‑1 (MQ=255)
                                                              aGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAacac                                <  1:1917136/93‑1 (MQ=255)
                                                              aGGAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAacac                                >  1:1657660/1‑93 (MQ=255)
                                                               ggAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACg                               <  1:2919643/93‑1 (MQ=255)
                                                               ggAGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACg                               >  1:948326/1‑93 (MQ=255)
                                                                 aGTACAATAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGAc                             <  2:5149308/93‑1 (MQ=255)
                                                                   tACAATAGGCAGATAAAGGCTTAAATGCTGTTCCATAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACtt                           <  2:4975385/93‑1 (MQ=255)
                                                                      aaTAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGc                        <  1:3213362/93‑1 (MQ=255)
                                                                      aaTAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGc                        >  2:2913040/1‑93 (MQ=255)
                                                                      aaTAGGCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGc                        <  2:5583247/93‑1 (MQ=255)
                                                                      aaTAGGCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGc                        >  2:6510768/1‑93 (MQ=255)
                                                                          ggCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCcgcg                    >  2:1606421/1‑93 (MQ=255)
                                                                           gCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCgcgc                   <  2:7263047/93‑1 (MQ=255)
                                                                           gCAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCgcgc                   <  2:3416524/93‑1 (MQ=255)
                                                                           gCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCgcgc                   <  1:3474094/93‑1 (MQ=255)
                                                                            cAGATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCt                  <  1:1446157/93‑1 (MQ=255)
                                                                              gATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTgg                <  1:4960113/93‑1 (MQ=255)
                                                                              gATAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTgg                <  2:6442258/93‑1 (MQ=255)
                                                                               aTAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGc               <  2:4812426/93‑1 (MQ=255)
                                                                               aTAAAGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGc               <  2:1656699/93‑1 (MQ=255)
                                                                                 aaaGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCgg             >  2:910201/1‑93 (MQ=255)
                                                                                 aaaGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCgg             <  2:1266042/93‑1 (MQ=255)
                                                                                 aaaGGCTTAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCgg             >  2:4768426/1‑93 (MQ=255)
                                                                                  aaGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGa            <  1:1715270/93‑1 (MQ=255)
                                                                                   aGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGAt           <  1:2401462/93‑1 (MQ=255)
                                                                                   aGGCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGAt           >  1:5088989/1‑93 (MQ=255)
                                                                                     gCTTAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATcc         <  1:4517639/93‑1 (MQ=255)
                                                                                       ttAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTc       <  1:127329/93‑1 (MQ=255)
                                                                                       ttAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTc       <  2:1317012/93‑1 (MQ=255)
                                                                                        tAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGCTCCTCa      >  1:3254092/1‑93 (MQ=255)
                                                                                        tAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTCa      >  1:3138990/1‑93 (MQ=255)
                                                                                        tAAATGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTCa      >  1:2556503/1‑93 (MQ=255)
                                                                                         aaaTGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTCat     <  1:5455222/93‑1 (MQ=255)
                                                                                            |                                                                                            
GACATTTTATTGTGAAAAGTCTTAAATTGTTGCGTCCGGGATCAAGGCGTCCCGGACGATTCAGGAGTACAATAGGCAGATAAAGGCTTAAACGCTGTTCCACAGGAAAGTCCATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTCATATT  >  NC_000913/3151465‑3151649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: