Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,167,940 G→A G33S (GGT→AGT)  qseB → quorum sensing regulator B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,167,9400GA86.2% 859.7 / 83.8 297G33S (GGT→AGT) qseBquorum sensing regulator B
Reads supporting (aligned to +/- strand):  ref base G (19/22);  new base A (133/123);  total (152/145)
Fisher's exact test for biased strand distribution p-value = 6.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 297 total aligned reads displayed.

ATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATT  >  NC_000913/3167850‑3168029
                                                                                          |                                                                                         
 ttttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGgtc                                                                                        >  2:5180999/1‑93 (MQ=255)
 ttttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtc                                                                                        <  2:7299461/93‑1 (MQ=255)
  tttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcg                                                                                       >  2:211498/1‑93 (MQ=255)
  tttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcg                                                                                       <  2:5559255/93‑1 (MQ=255)
   ttACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcgt                                                                                      <  2:4309717/93‑1 (MQ=255)
    tACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGgtcgtc                                                                                     <  1:6426868/93‑1 (MQ=255)
    tACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAgtcgtc                                                                                     >  1:6381012/1‑93 (MQ=255)
     aCTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCa                                                                                    <  1:6608793/93‑1 (MQ=255)
     aCTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCa                                                                                    <  1:5621226/93‑1 (MQ=255)
     aCTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCa                                                                                    >  1:7393293/1‑93 (MQ=255)
       tGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAgg                                                                                  >  2:2482600/1‑93 (MQ=255)
        gATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAggg                                                                                 >  2:1507281/1‑93 (MQ=255)
        gATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAggg                                                                                 >  2:6409085/1‑93 (MQ=255)
          tAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGaa                                                                               >  1:390715/1‑93 (MQ=255)
            gaagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGaaaa                                                                             <  2:6025442/93‑1 (MQ=255)
            gaagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGaaaa                                                                             <  2:3185796/93‑1 (MQ=255)
             aagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAag                                                                            <  2:6880942/93‑1 (MQ=255)
             aagaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAag                                                                            >  2:6767749/1‑93 (MQ=255)
              agaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAaga                                                                           <  2:511845/93‑1 (MQ=255)
              agaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAaga                                                                           >  2:6528051/1‑93 (MQ=255)
               gaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAagag                                                                          >  1:2924583/1‑93 (MQ=255)
               gaTGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAagag                                                                          >  1:5522551/1‑93 (MQ=255)
                 tGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGgc                                                                        <  1:1310168/93‑1 (MQ=255)
                 tGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGgc                                                                        >  1:538831/1‑93 (MQ=255)
                    cATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCt                                                                     >  2:91010/1‑93 (MQ=255)
                     aTGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCtt                                                                    >  2:3868075/1‑93 (MQ=255)
                        cTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTtat                                                                 <  1:5725228/93‑1 (MQ=255)
                         tGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTtata                                                                >  2:7329872/1‑93 (MQ=255)
                          gATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAg                                                               >  1:2834072/1‑93 (MQ=255)
                           aTTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgc                                                              <  2:7082714/93‑1 (MQ=255)
                           aTTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgc                                                              >  1:3179676/1‑93 (MQ=255)
                            ttGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAgcg                                                             >  2:5371974/1‑93 (MQ=255)
                            ttGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAgcg                                                             >  1:1018256/1‑93 (MQ=255)
                               gCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCAc                                                          <  2:4400315/93‑1 (MQ=255)
                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                        >  1:4334107/1‑93 (MQ=255)
                                 gACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCt                                                        >  1:4819764/1‑93 (MQ=255)
                                  aCGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTAGACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCtt                                                       >  1:1643630/1‑93 (MQ=255)
                                  aCGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCtt                                                       >  2:1131386/1‑93 (MQ=255)
                                   cGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTa                                                      <  1:5876484/93‑1 (MQ=255)
                                   cGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTa                                                      <  1:1877793/93‑1 (MQ=255)
                                    ggCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTat                                                     <  1:3756792/93‑1 (MQ=255)
                                     gCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatg                                                    >  2:2688664/1‑93 (MQ=255)
                                     gCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatg                                                    >  1:6257303/1‑93 (MQ=255)
                                     gCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatg                                                    >  2:504447/1‑93 (MQ=255)
                                      cATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatga                                                   >  1:1045259/1‑93 (MQ=255)
                                      cATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatga                                                   <  1:4654391/93‑1 (MQ=255)
                                       aTCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatgat                                                  <  1:2675256/93‑1 (MQ=255)
                                       aTCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatgat                                                  >  1:1716681/1‑93 (MQ=255)
                                        tCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTatgatg                                                 >  1:4546644/1‑93 (MQ=255)
                                         cAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGc                                                <  1:7128409/93‑1 (MQ=255)
                                          aaaaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCg                                               >  1:5014098/1‑93 (MQ=255)
                                          aaaaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCg                                               >  2:2991466/1‑93 (MQ=255)
                                           aaaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCgg                                              >  1:772440/1‑93 (MQ=255)
                                            aaCGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGt                                             >  1:6829363/1‑93 (MQ=255)
                                              cGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGa                                           <  2:826498/93‑1 (MQ=255)
                                              cGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGa                                           <  2:6578881/93‑1 (MQ=255)
                                                  ccTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCt                                       <  2:3753444/93‑1 (MQ=255)
                                                  ccTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCt                                       <  1:340638/93‑1 (MQ=255)
                                                   cTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTg                                      >  2:1776857/1‑93 (MQ=255)
                                                   cTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTg                                      >  2:1288096/1‑93 (MQ=255)
                                                    ttAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTgg                                     >  2:4549353/1‑93 (MQ=255)
                                                    ttAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTgg                                     <  2:2576414/93‑1 (MQ=255)
                                                     tAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGa                                    >  2:1222002/1‑93 (MQ=255)
                                                      aGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGAt                                   <  2:1558824/93‑1 (MQ=255)
                                                        tAAAATGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGAttt                                 >  1:2036637/1‑93 (MQ=255)
                                                         aaaaTGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTa                                >  1:5675549/1‑93 (MQ=255)
                                                           aaTGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAAc                              >  2:3287844/1‑93 (MQ=255)
                                                            aTGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAAcc                             >  2:5304013/1‑93 (MQ=255)
                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                            <  1:7219247/93‑1 (MQ=255)
                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                            >  1:510949/1‑93 (MQ=255)
                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                            <  1:1477625/93‑1 (MQ=255)
                                                             tGGGTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCt                            >  2:4767355/1‑93 (MQ=255)
                                                              gggTTTTAGCGTCGACTGGTTTACACAAAGGCGTCTGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCtt                           >  1:4220678/1‑93 (MQ=255)
                                                               ggTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTa                          >  2:1363388/1‑93 (MQ=255)
                                                               ggTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTCTATAGCGCACCTTGTGATGCGGTGATCCTGGATTTAACCTTa                          >  2:7366103/1‑93 (MQ=255)
                                                                gTTTTAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAc                         >  2:1940603/1‑93 (MQ=255)
                                                                 ttttAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAcc                        >  1:4772720/1‑93 (MQ=255)
                                                                 ttttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAcc                        <  1:4601218/93‑1 (MQ=255)
                                                                  tttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTAccc                       <  1:4871745/93‑2 (MQ=255)
                                                                  tttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCa                       <  2:3592210/93‑1 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      <  2:4514003/93‑1 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      >  2:4660758/1‑93 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      <  1:3601682/93‑1 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      <  2:347677/93‑1 (MQ=255)
                                                                   ttAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAg                      <  1:7276338/93‑1 (MQ=255)
                                                                    tAGCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAgg                     >  1:1768439/1‑93 (MQ=255)
                                                                      gCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCa                   <  2:4473785/93‑1 (MQ=255)
                                                                      gCGTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCa                   <  2:4865433/93‑1 (MQ=255)
                                                                        gTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatg                 <  2:1353181/93‑1 (MQ=255)
                                                                        gTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatg                 >  2:1845207/1‑93 (MQ=255)
                                                                        gTCGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatg                 >  1:4133206/1‑93 (MQ=255)
                                                                          cGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatgga               >  1:300656/1‑93 (MQ=255)
                                                                          cGACTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatgga               >  1:2251394/1‑93 (MQ=255)
                                                                            aCTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatg             >  1:6769948/1‑93 (MQ=255)
                                                                             cTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatgg            >  2:7481284/1‑93 (MQ=255)
                                                                             cTGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCatggatgg            <  2:422376/93‑1 (MQ=255)
                                                                              tGGTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCGGGCATGGATGGt           <  1:852850/93‑1 (MQ=255)
                                                                               ggTTTACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTc          <  1:6152497/93‑1 (MQ=255)
                                                                                   tACACAAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGa      >  2:5933360/1‑93 (MQ=255)
                                                                                     cacaAAGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGata    <  1:2438459/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATT  >  NC_000913/3167850‑3168029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: