Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 320,122 T→C A224A (GCT→GCC ykgD → putative ARAC‑type regulatory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913320,1220TC84.3% 559.1 / 100.1 249A224A (GCT→GCCykgDputative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand):  ref base T (16/23);  new base C (104/105);  total (120/129)
Fisher's exact test for biased strand distribution p-value = 3.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.60e-01

Only 100 of 267 total aligned reads displayed.

GGACCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTATGC  >  NC_000913/320031‑320214
                                                                                           |                                                                                            
ggACCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCgctggctg                                                                                             >  2:2062302/1‑93 (MQ=255)
  aCCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTa                                                                                           >  2:1428751/1‑93 (MQ=255)
  aCCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTa                                                                                           >  2:5554053/1‑93 (MQ=255)
  aCCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTa                                                                                           <  2:1063877/93‑1 (MQ=255)
  aCCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTa                                                                                           <  2:2120852/93‑1 (MQ=255)
   ccGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTAt                                                                                          <  2:7407336/93‑1 (MQ=255)
    cGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTAtt                                                                                         <  1:7261787/93‑1 (MQ=255)
     gTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTa                                                                                        >  1:3417306/1‑93 (MQ=255)
     gTCGAATCGCTGGCCAGCATCGCTCACATGTCCAGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTa                                                                                        >  1:5241780/1‑93 (MQ=255)
      tCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTaa                                                                                       >  2:7276967/1‑93 (MQ=255)
      tCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTaa                                                                                       >  2:2830689/1‑93 (MQ=255)
      tCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTaa                                                                                       >  1:3546499/1‑93 (MQ=255)
       cGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAAc                                                                                      <  2:2344885/93‑1 (MQ=255)
        gAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACa                                                                                     >  1:1002198/1‑93 (MQ=255)
         aaTCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACaa                                                                                    >  2:6173467/1‑93 (MQ=255)
         aaTCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACaa                                                                                    >  1:196675/1‑93 (MQ=255)
          aTCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACaaa                                                                                   >  1:78233/1‑93 (MQ=255)
           tCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAg                                                                                  <  1:7061527/93‑1 (MQ=255)
            cGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGt                                                                                 <  1:7155169/93‑1 (MQ=255)
            cGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGt                                                                                 <  1:5504354/93‑1 (MQ=255)
             gCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGtt                                                                                <  2:5770889/93‑1 (MQ=255)
             gCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGtt                                                                                <  1:4512781/93‑1 (MQ=255)
              cTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTg                                                                               >  2:6951355/1‑93 (MQ=255)
               tGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGc                                                                              >  2:6824025/1‑93 (MQ=255)
                  ccAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTc                                                                           >  2:531806/1‑93 (MQ=255)
                  ccAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTc                                                                           <  1:2631317/93‑1 (MQ=255)
                   cAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCt                                                                          >  1:4255085/1‑93 (MQ=255)
                    aGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTa                                                                         <  2:4517357/93‑1 (MQ=255)
                    aGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTa                                                                         >  1:7441407/1‑93 (MQ=255)
                     gCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTAc                                                                        <  2:3340566/93‑1 (MQ=255)
                      cATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACa                                                                       <  1:6252276/93‑1 (MQ=255)
                        tCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACaaa                                                                     >  2:1539342/1‑93 (MQ=255)
                        tCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACaaa                                                                     <  1:2464855/93‑1 (MQ=255)
                         cGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAAt                                                                    <  2:6425299/93‑1 (MQ=255)
                         cGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAAt                                                                    <  2:7078108/93‑1 (MQ=255)
                           cTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAg                                                                  <  1:6361187/93‑1 (MQ=255)
                            tCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGc                                                                 >  2:295472/1‑93 (MQ=255)
                            tCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGc                                                                 >  1:5545395/1‑93 (MQ=255)
                            tCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGc                                                                 >  2:4020236/1‑93 (MQ=255)
                              acaTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCgg                                                               >  1:3326503/1‑93 (MQ=255)
                               caTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGc                                                              <  1:421359/93‑1 (MQ=255)
                                aTGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGcc                                                             <  2:429084/93‑1 (MQ=255)
                                 tGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGccc                                                            <  2:907445/93‑1 (MQ=255)
                                  gTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCa                                                           <  1:927983/93‑1 (MQ=255)
                                    cccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGa                                                         <  2:4587208/93‑1 (MQ=255)
                                     ccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGAt                                                        >  1:6644622/1‑93 (MQ=255)
                                     ccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGAt                                                        <  2:3687730/93‑1 (MQ=255)
                                     ccGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGAt                                                        <  2:2628424/93‑1 (MQ=255)
                                      cGGGCAAGTTTTGCCCAGCTTTCCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATg                                                       <  1:4352472/93‑1 (MQ=255)
                                       gggCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGt                                                      >  2:4894832/1‑93 (MQ=255)
                                         gCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGttt                                                    >  1:5853347/1‑93 (MQ=255)
                                         gCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGttt                                                    >  1:3341264/1‑93 (MQ=255)
                                          cAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGtttt                                                   <  2:4661162/93‑1 (MQ=255)
                                           aaGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTc                                                  <  1:2323582/93‑1 (MQ=255)
                                           aaGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTc                                                  <  1:4415442/93‑1 (MQ=255)
                                            aGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTcc                                                 <  1:2207117/93‑1 (MQ=255)
                                            aGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTcc                                                 >  1:397154/1‑93 (MQ=255)
                                             gTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTccc                                                >  1:6949531/1‑93 (MQ=255)
                                             gTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTccc                                                >  1:6094694/1‑93 (MQ=255)
                                               tttGCCCAGCTTTTGCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCgg                                              <  2:4757414/93‑1 (MQ=255)
                                                 tGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCGAGATGTTTTCCCGGGa                                            <  1:3499784/93‑1 (MQ=255)
                                                   cccAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGaaa                                          <  2:4822765/93‑1 (MQ=255)
                                                   cccAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGaaa                                          <  1:498563/93‑1 (MQ=255)
                                                    ccAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAAc                                         >  1:877808/1‑93 (MQ=255)
                                                       gCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCt                                      <  2:3512197/93‑1 (MQ=255)
                                                          tttCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTccc                                   >  1:1950966/1‑93 (MQ=255)
                                                          tttCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTccc                                   <  1:1348733/93‑1 (MQ=255)
                                                          tttCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTccc                                   <  1:5464983/93‑1 (MQ=255)
                                                          tttCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTccc                                   >  2:5464487/1‑93 (MQ=255)
                                                           ttCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCt                                  <  1:5774873/93‑1 (MQ=255)
                                                            tCCGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtg                                 >  1:5422224/1‑93 (MQ=255)
                                                              cGTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgtt                               >  2:5178688/1‑93 (MQ=255)
                                                               gTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgttg                              >  2:5359438/1‑93 (MQ=255)
                                                               gTGATGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgttg                              >  2:4432229/1‑93 (MQ=255)
                                                                tGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCtgttgt                             <  1:3867630/93‑1 (MQ=255)
                                                                 gATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTtgtg                            >  2:6569593/1‑93 (MQ=255)
                                                                   tGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTgtggt                          >  2:5090283/1‑93 (MQ=255)
                                                                   tGTTTCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTgtggt                          <  2:7000079/93‑1 (MQ=255)
                                                                    gTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTgtggtg                         >  2:1992843/1‑93 (MQ=255)
                                                                     tttCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGa                        >  2:5968062/1‑93 (MQ=255)
                                                                       tCCGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATc                      >  1:5868618/1‑93 (MQ=255)
                                                                         cGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGc                    >  1:1588295/1‑93 (MQ=255)
                                                                         cGGAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGc                    <  2:5509635/93‑1 (MQ=255)
                                                                          ggAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCt                   >  2:313922/1‑93 (MQ=255)
                                                                          ggAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCt                   >  2:6761082/1‑93 (MQ=255)
                                                                           gAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTg                  >  1:1724961/1‑93 (MQ=255)
                                                                           gAACCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTg                  >  2:1181674/1‑93 (MQ=255)
                                                                            aaCCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGa                 <  1:1208457/93‑1 (MQ=255)
                                                                            aaCCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGa                 <  1:4047310/93‑1 (MQ=255)
                                                                            aaCCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGa                 >  1:2043133/1‑93 (MQ=255)
                                                                            aaCCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGa                 <  1:2541062/93‑1 (MQ=255)
                                                                             aCCACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAg                >  1:2994023/1‑93 (MQ=255)
                                                                              ccACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGt               >  1:6983744/1‑93 (MQ=255)
                                                                              ccACGCCGCTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGt               <  2:6458932/93‑1 (MQ=255)
                                                                                   ccgcTGGCCGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTa          <  2:864667/93‑1 (MQ=255)
                                                                                     gctggccgTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAgg        >  1:1482004/1‑93 (MQ=255)
                                                                                     gctggccgTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAgg        <  2:3622323/93‑1 (MQ=255)
                                                                                      ctggctgTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGc       <  2:3754952/93‑1 (MQ=255)
                                                                                      ctggccgTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGc       <  2:7517926/93‑1 (MQ=255)
                                                                                         gctgTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTAt    >  1:3310083/1‑93 (MQ=255)
                                                                                           |                                                                                            
GGACCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTATGC  >  NC_000913/320031‑320214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: