BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,368,253	A→G	L140P (CTG→CCG)	yhcJ ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,368,253	0	A	G	85.2%	695.8 / 116.2	303	L140P (CTG→CCG)	yhcJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (25/20); new base G (125/133); total (150/153)
Fisher's exact test for biased strand distribution p-value = 4.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.29e-01

Only 100 of 307 total aligned reads displayed.

AGCGCCAGATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCGGACGC  >  NC_000913/3368163‑3368342

aGCGCCAGATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCggg                                                                                         >  1:2628907/1‑93 (MQ=255)

aGCGCCAGATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCggg                                                                                         <  2:3620812/93‑1 (MQ=255)

 gcgcCAGATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGc                                                                                        <  2:6250462/93‑1 (MQ=255)

 gcgcCAGATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGc                                                                                        >  1:248427/1‑93 (MQ=255)

  cgcCAGATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGcc                                                                                       <  2:470156/93‑1 (MQ=255)

     cAGATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTc                                                                                    <  2:1863483/93‑1 (MQ=255)

       gATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCtt                                                                                  >  1:2919977/1‑93 (MQ=255)

         tCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTcc                                                                                <  2:6081959/93‑1 (MQ=255)

           cGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCgg                                                                              <  2:2040513/93‑1 (MQ=255)

           cGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCgg                                                                              <  2:6596189/93‑1 (MQ=255)

           cGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCgg                                                                              <  1:1669757/93‑1 (MQ=255)

            ggCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGc                                                                             <  1:3869552/93‑1 (MQ=255)

            ggCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGc                                                                             >  1:1732182/1‑93 (MQ=255)

             gCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCg                                                                            >  1:5520440/1‑93 (MQ=255)

              ctctTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGt                                                                           >  1:5835431/1‑93 (MQ=255)

              ctctTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGt                                                                           <  2:451043/93‑1 (MQ=255)

              ctctTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGt                                                                           <  2:2549898/93‑1 (MQ=255)

               tcttctGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGtt                                                                          <  1:2173682/93‑1 (MQ=255)

                 ttctGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGa                                                                        <  2:4410066/93‑1 (MQ=255)

                 ttctGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGa                                                                        <  1:4347687/93‑1 (MQ=255)

                 ttctGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGa                                                                        <  2:861261/93‑1 (MQ=255)

                   ctGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGc                                                                      <  2:3686336/93‑1 (MQ=255)

                    tGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCa                                                                     >  1:4006190/1‑93 (MQ=255)

                    tGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCa                                                                     >  2:6989367/1‑93 (MQ=255)

                    tGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCa                                                                     >  1:6584297/1‑93 (MQ=255)

                    tGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCa                                                                     >  1:2256030/1‑93 (MQ=255)

                    tGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCa                                                                     <  2:5880923/93‑1 (MQ=255)

                     ggCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAg                                                                    <  1:7363939/93‑1 (MQ=255)

                     ggCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAg                                                                    >  1:875157/1‑93 (MQ=255)

                      gCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGt                                                                   <  1:760088/93‑1 (MQ=255)

                       cGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTc                                                                  <  2:7157448/93‑1 (MQ=255)

                        gTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCg                                                                 >  2:4479355/1‑93 (MQ=255)

                         tttCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCgg                                                                >  1:5300291/1‑93 (MQ=255)

                          ttCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGt                                                               <  2:2797482/93‑1 (MQ=255)

                            cAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCa                                                             <  2:5230637/93‑1 (MQ=255)

                              ggCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATc                                                           <  1:5191031/93‑1 (MQ=255)

                              ggCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATc                                                           >  2:3970931/1‑93 (MQ=255)

                                cGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGc                                                         >  1:3244764/1‑93 (MQ=255)

                                 gTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGcc                                                        >  1:3599199/1‑93 (MQ=255)

                                 gTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGcc                                                        <  2:4062566/93‑1 (MQ=255)

                                 gTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGcc                                                        <  2:2429703/93‑1 (MQ=255)

                                   ggTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAg                                                      >  2:4226352/1‑93 (MQ=255)

                                    gTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGt                                                     >  1:3199331/1‑93 (MQ=255)

                                    gTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGt                                                     >  2:5162970/1‑93 (MQ=255)

                                     tataGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTa                                                    >  2:6157435/1‑93 (MQ=255)

                                      ataGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTaa                                                   <  2:3747989/93‑1 (MQ=255)

                                      ataGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTaa                                                   <  1:1222209/93‑1 (MQ=255)

                                       taGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTaaa                                                  >  1:5962432/1‑93 (MQ=255)

                                       taGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTaaa                                                  <  2:1023118/93‑1 (MQ=255)

                                        aGCCAGAAAGCGTAGTGCCAATAATTTCGGGTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTTAGCAGTCGGTCATCGCCAGTaagc                                                 <  1:2332024/93‑3 (MQ=255)

                                        aGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAAc                                                 <  2:7200692/93‑1 (MQ=255)

                                           cAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGt                                              >  2:6010742/1‑93 (MQ=255)

                                           cAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGt                                              <  2:5409851/93‑1 (MQ=255)

                                            aGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTg                                             <  2:6740342/93‑1 (MQ=255)

                                            aGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTg                                             <  2:2293633/93‑1 (MQ=255)

                                             gAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGa                                            >  2:3661057/1‑93 (MQ=255)

                                              aaaGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGAt                                           >  1:4517545/1‑93 (MQ=255)

                                               aaGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATg                                          >  1:1469076/1‑93 (MQ=255)

                                               aaGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATg                                          >  1:6253368/1‑93 (MQ=255)

                                                aGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATgg                                         <  2:1079657/93‑1 (MQ=255)

                                                 gCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGt                                        <  1:3433496/93‑1 (MQ=255)

                                                 gCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGt                                        >  1:700237/1‑93 (MQ=255)

                                                  cGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTg                                       <  1:5363688/93‑1 (MQ=255)

                                                    tAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGaa                                     <  1:796549/93‑1 (MQ=255)

                                                    tAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGaa                                     <  1:3496739/93‑1 (MQ=255)

                                                     aGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAAt                                    <  1:616987/93‑1 (MQ=255)

                                                      gTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATa                                   <  2:6287881/93‑1 (MQ=255)

                                                      gTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATa                                   <  2:6373499/93‑1 (MQ=255)

                                                      gTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATa                                   >  2:6960684/1‑93 (MQ=255)

                                                        gCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACg                                 <  2:2770589/93‑1 (MQ=255)

                                                         ccAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGt                                <  2:6944131/93‑1 (MQ=255)

                                                         ccAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGt                                <  1:7123317/93‑1 (MQ=255)

                                                          cAATAATTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTg                               >  2:7401025/1‑93 (MQ=255)

                                                            ataatTTCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGcc                             >  2:3840962/1‑93 (MQ=255)

                                                                tttCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCcagca                         <  1:4979177/93‑1 (MQ=255)

                                                                tttCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCcagca                         >  1:4754594/1‑93 (MQ=255)

                                                                tttCGGCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCcagca                         >  2:4975890/1‑93 (MQ=255)

                                                                    ggCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGt                     >  1:6689617/1‑93 (MQ=255)

                                                                     gCTCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGtt                    >  1:1562581/1‑93 (MQ=255)

                                                                       tCCCAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTc                  <  1:94569/93‑1 (MQ=255)

                                                                        cccAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCa                 >  2:3115824/1‑93 (MQ=255)

                                                                         ccAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCaa                >  2:3010569/1‑93 (MQ=255)

                                                                         ccAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCaa                >  1:2677157/1‑93 (MQ=255)

                                                                         ccAGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCaa                <  1:4086270/93‑1 (MQ=255)

                                                                           aGCTTTTGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACa              <  2:1471874/93‑1 (MQ=255)

                                                                             cTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAgg            <  2:2144717/93‑1 (MQ=255)

                                                                              ttttGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGc           <  2:3511931/93‑1 (MQ=255)

                                                                              ttttGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGc           <  1:1083087/93‑1 (MQ=255)

                                                                              ttttGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGc           >  2:1273996/1‑93 (MQ=255)

                                                                               tttGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCa          <  1:1346147/93‑1 (MQ=255)

                                                                                ttGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCAc         <  2:322410/93‑1 (MQ=255)

                                                                                 tGGCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCAcc        >  1:6787155/1‑93 (MQ=255)

                                                                                  ggCATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCg       <  1:6842978/93‑1 (MQ=255)

                                                                                  ggCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCg       <  1:5053383/93‑1 (MQ=255)

                                                                                    cATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCGGa     <  2:1639266/93‑1 (MQ=255)

                                                                                    cATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCGGa     <  1:1921870/93‑1 (MQ=255)

                                                                                    cATGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCGGa     <  2:2828561/93‑1 (MQ=255)

                                                                                     aTGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCGGAc    >  1:6055753/1‑93 (MQ=255)

                                                                                     aTGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCGGAc    >  1:4635867/1‑93 (MQ=255)

                                                                                      tGCCGGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCGGAcg   >  1:2529770/1‑93 (MQ=255)

AGCGCCAGATCCGGCTCTTCTGGCGTTTCAGGCGTGGTATAGCCAGAAAGCGTAGTGCCAATAATTTCGGCTCCCAGCTTTTGGCATGCCAGGCCGTCTTCCGGCGTTGAGCAGTCGGTCATCGCCAGTAAACCGTGATGGTGAATACGTGCCAGCAGCGTTTCAACAGGCACCGGACGC  >  NC_000913/3368163‑3368342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`